CF836175

Overview
NameCF836175
Unique NameCF836175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2774 contig Csv1_Contig2774:1152..1967. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 2.614e-97
Identity = 175/241 (72.61%), Postives = 190/241 (78.84%), Query Frame = 2
Query:   95 MGVPETDPLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSKLDDWVLCRIYKKHSGSQK-PVSATSVXXXXXXXXXXXXXXXXHLDDVLESLPEIDDRFFALPRMNSLKTLQQEDNKGYNLQHLGSGNFDWA 814
            MGV E DPL+QL+LPPGFRFYPTDEELLVQYLCRKVAG HFSLQ+IG+IDLYKFDPW LPSKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIT +GR+VGIKKALVFY GKAPKGTKTNWIMHEYRL E SR +GSSKLDDWVLCRIYKK SGSQ+  V+                     LDDVL+S PEI D+ F LPRMNSL+T+              +GNFDWA
Sbjct:    1 MGVREKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAVTPVQACREEHSTNGSSSSSSSQLDDVLDSFPEIKDQSFNLPRMNSLRTIL-------------NGNFDWA 228          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 7.368e-92
Identity = 166/247 (67.21%), Postives = 190/247 (76.92%), Query Frame = 2
Query:   95 MGVPETDPLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSKLDDWVLCRIYKKHSGSQKPV---SATSVXXXXXXXXXXXXXXXXHLDDVLESL-PEIDDRFFALPRMNSLKTLQ---QEDNKGYNLQHLGSGNFDWA 814
            MG+ ETDPL+QL+LPPGFRFYPTDEEL+VQYLCRK AG  FSLQ+I EIDLYKFDPWVLP+KA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII+TEG++VGIKKALVFY+GKAPKGTKTNWIMHEYRL EPSR+NGS+KLDDWVLCRIYKK S +QK V      +                 H +DVL+S   EID+R F     N + +L+    E   G++     + NFDWA
Sbjct:    1 MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQKQVYDNGIANAREFSNNGTSSTTSSSSHFEDVLDSFHQEIDNRNFQFSNPNRISSLRPDLTEQKTGFH-GLADTSNFDWA 246          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 2.006e-89
Identity = 166/247 (67.21%), Postives = 187/247 (75.71%), Query Frame = 2
Query:   95 MGVPETDPLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSKLDDWVLCRIYKKHSGSQKPV--SATSVXXXXXXXXXXXXXXXXHLDDVLESLPEIDDRF--FALPRMNSLKTLQQE--DNKGYNLQHLG-SGNFDWA 814
            MG+ E DPL+QL+LPPGFRFYPTDEEL+V+YLCRK AG  FSLQ+I EIDLYKFDPWVLPSKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK+I+TEGR+VGIKKALVFY+GKAPKGTKTNWIMHEYRL EPSR+NGS+KLDDWVLCRIYKK + +QK    +  +                   DDVLESL EID+R   FA    N+L    +    N     Q L    +FDWA
Sbjct:    1 MGLQELDPLAQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQTSAQKQAYNNLMTSGREYSNNGSSTSSSSHQYDDVLESLHEIDNRSLGFAAGSSNALPHSHRPVLTNHKTGFQGLAREPSFDWA 247          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.109e-63
Identity = 115/173 (66.47%), Postives = 132/173 (76.30%), Query Frame = 2
Query:   98 GVPETDPLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEG--RKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFE----PSRKNGSSKLDDWVLCRIYKKHSGSQK 598
            G    D  ++LNLPPGFRF+PTDEEL+V YLCRKVA Q   + II E+DLYK DPW LP KA+FG KEWYFF+PRDRKYPNGSRPNR AG GYWKATG DK +  +G  R VGIKKALVFY GKAP+G KT+WIMHEYRL +    P  K GS KLD+WVLCR+Y K +  +K
Sbjct:    9 GSGRRDAEAELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEK 181          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.226e-63
Identity = 114/164 (69.51%), Postives = 130/164 (79.27%), Query Frame = 2
Query:  128 LNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFE---PSRKNGSSKLDDWVLCRIYKKHSGSQKPVSA 610
            L LPPGFRF+PTDEEL++ YLCR+ AG   ++ II EIDLYKFDPW LP  A++GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK + +  + V IKKALVFY GKAPKG KTNWIMHEYRL +    +RK  S +LDDWVLCRIY K  G +KP +A
Sbjct:    7 LQLPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSP-KPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEKPPAA 169          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.355e-61
Identity = 112/161 (69.57%), Postives = 126/161 (78.26%), Query Frame = 2
Query:  128 LNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSR----KNGSSKLDDWVLCRIYKKHSGSQK 598
            L LPPGFRF+PTDEEL++ YLCRK A Q  ++ II EIDLYK+DPW LP  A++GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I    + VGIKKALVFY GKAPKG KTNWIMHEYRL +  R    K  S +LDDWVLCRIY K   +++
Sbjct:    5 LQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLP-KPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATER 164          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.124e-58
Identity = 109/171 (63.74%), Postives = 129/171 (75.44%), Query Frame = 2
Query:  116 PLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK-IITTEG---RKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEP--------SRKNGSSKLDDWVLCRIYKKHSGS 592
            P  Q NLPPGFRF+PTDEEL++ YL RK       + II ++DLYKFDPW LP+KA FGE+EWYFFSPRDRKYPNG+RPNR A SGYWKATGTDK +I+T G   +KVG+KKALVFY GK PKG K++WIMHEYRL +           K  S +LDDWVLCRIYKK++ +
Sbjct:   11 PPPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNST 181          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.329e-58
Identity = 107/170 (62.94%), Postives = 128/170 (75.29%), Query Frame = 2
Query:  122 SQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSR-----KNGSSKLDDWVLCRIYKKHSGSQKPVSATS 616
            ++LNLP GFRF+PTDEEL+  YLCR+ A +  ++ +I EIDLYKF+PW LP  A++GEKEWYFFS RDRKYPNGSRPNR AG+GYWKATG DK I  + + +GIKKALVFY GKAPKG KTNWIMHEYRL    R     K  + +LDDWVLCRIY K    +K + A +
Sbjct:   46 AELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKYLPAAA 214          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.025e-57
Identity = 103/162 (63.58%), Postives = 122/162 (75.31%), Query Frame = 2
Query:  122 SQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFE----PSRKNGSSKLDDWVLCRIYKKHSGSQ 595
            SQ  LPPGFRF+PTDEEL+V YL  +   +   + II E+D+YKFDPW LP K  FGE EWYFFSPR+RKYPNG RPNR A SGYWKATGTDK I +    VG+KKALVFY G+ PKG KT+WIMHEYRL +     +++NGS +LD+WVLCRIYKK   S+
Sbjct:    5 SQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASK 166          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.454e-57
Identity = 102/167 (61.08%), Postives = 123/167 (73.65%), Query Frame = 2
Query:  113 DPLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFE-----PSRKNGSSKLDDWVLCRIYKKHSGSQK 598
            D  + LNLPPGFRF+PTDEEL+  YLC + AG+   + II E+DLY+ DPW LP +A+FG +EWYFF+PRDRKYPNGSRPNR A SGYWKATG DK +   GR  GIKKALVFY GK P+G KT WIMHEYRL +      +   G+ +LDDWVLCR+Y K +  +K
Sbjct:   10 DAEADLNLPPGFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNEWEK 176          
The following BLAST results are available for this feature:
BLAST of CF836175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC72_ARATH2.614e-9772.61NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC19_ARATH7.368e-9267.21NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC55_ARATH2.006e-8967.21NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC68_ORYSJ1.109e-6366.47NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC48_ORYSJ3.226e-6369.51NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC2_ARATH1.355e-6169.57NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC18_ARATH3.124e-5863.74NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NA102_ARATH5.329e-5862.94NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC29_ARATH2.025e-5763.58NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC67_ORYSJ3.454e-5761.08NAC domain-containing protein 67 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02I18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02I18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836175 ID=CF836175; Name=CF836175; organism=Citrus sinensis; type=EST; length=816bp
CCAATTTCCATTTCTCCCTCTGCTTGTCCCCATAGCTTTAGCTCAGCATC
TTCATCTATATCTTTTATTCGCAATTCATTTGAAAGCTTGAAAAATGGGC
GTACCGGAGACCGACCCGCTCTCACAATTGAACTTACCTCCGGGTTTTCG
GTTTTACCCGACTGATGAGGAACTTCTAGTTCAATATCTCTGTCGCAAAG
TTGCAGGGCAACATTTTTCGCTGCAAATTATCGGTGAAATAGATTTGTAC
AAGTTTGACCCATGGGTTCTACCAAGCAAGGCAATTTTTGGTGAGAAAGA
ATGGTACTTTTTCAGCCCCAGGGATAGAAAATATCCAAACGGGTCCCGAC
CCAACAGAGTAGCCGGGTCCGGGTATTGGAAGGCCACAGGCACCGACAAG
ATTATCACAACTGAAGGTCGTAAGGTTGGTATCAAAAAGGCTCTTGTTTT
TTACGTAGGCAAAGCTCCAAAAGGCACCAAAACCAATTGGATCATGCACG
AATATCGACTCTTTGAACCTTCTCGCAAAAATGGCAGCTCCAAGTTAGAT
GATTGGGTTCTGTGCAGAATCTATAAGAAGCATTCAGGTTCCCAAAAACC
AGTGTCAGCAACAAGTGTTTCTTCAAGCAAAGAACACAGTAATGGTTCTT
GTTCATCTTCATCTTCTCATCTTGATGATGTGCTCGAGTCTTTACCTGAA
ATTGATGACCGATTTTTCGCTTTGCCGCGCATGAACTCACTCAAGACTTT
ACAGCAAGAAGACAACAAAGGTTACAATTTGCAGCATCTGGGGTCGGGTA
ATTTTGACTGGGCGAG
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