CF836179

Overview
NameCF836179
Unique NameCF836179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836179 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.688e-88
Identity = 157/207 (75.85%), Postives = 182/207 (87.92%), Query Frame = -2
Query:  191 IGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAMSNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVGELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQELYSTFVGIQTGVIEDKKGWTVEV 811
            +GSGP+LGLGPAPEYTF+ YASPVGNYFKEG A LNLY+EEE+VRAAPGGAGGVK+++NYAPVLKAL RAKSRGFSDVLYLDSV +K +EE SSCN+FVVKG  ISTPATNGTILEGITR+SV+EIA D GYQV E+ + V E+++AD+VFCTGTAVVVAPVG+ITYQ KRVE+KTG  SV Q+L S  VGIQTG+IED KGW  ++
Sbjct:  181 MGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDI 387          
BLAST of CF836179 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.029e-69
Identity = 128/208 (61.54%), Postives = 162/208 (77.88%), Query Frame = -2
Query:  191 IGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAMSNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVGELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGS-RSVYQELYSTFVGIQTGVIEDKKGWTVEV 811
            +G+G VLGL PAPEYTF+ Y SPVGNYFKEG AP+NL +E EF RA PGG GGVK + NYA VLKA   AK++G+SDVLYLD + ++ +EEVSSCNIF+VK NVISTP   GTIL GITR+S+I++AR  G+QVEER + V EL+ AD+VFCTGTAVVV+PVGS+TY+ KRV +  G+  +V ++LY+    +Q G+IED   WTV +
Sbjct:  205 MGTGAVLGLAPAPEYTFIIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCIYKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSMIDVARTQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSVTYKGKRVSYGEGTFGTVSKQLYTVLTSLQMGLIEDNMKWTVNL 412          
BLAST of CF836179 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 260.766 bits (665), Expect = 6.667e-69
Identity = 132/206 (64.08%), Postives = 158/206 (76.70%), Query Frame = -2
Query:  191 GSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAMSNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVGELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQELYSTFVGIQTGVIEDKKGWTVEV 808
            GSG  LG+  A EYTFL + SPV NYFKEG+A LNLY+EE   RA  GG GGVKA+SNY PVL+ + RAKSRGFSDVLYLD+   KN+EEVS+ NIF+VKGN I TPAT+GTIL GITR+S+IEIA D GY+VEER +PV EL  A++VFCTGTA  VA VGSIT++N R E+K G   V Q+L S  VGIQTG I+D K W +++
Sbjct:  178 GSGASLGVAAASEYTFLVFGSPVQNYFKEGTAALNLYVEEVIPRAYLGGTGGVKAISNYGPVLEVMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNTIVTPATSGTILGGITRKSIIEIALDLGYKVEERSVPVEELKEAEEVFCTGTAAGVASVGSITFKNTRTEYKVGDGIVTQQLRSILVGIQTGSIQDTKDWVLQI 383          
BLAST of CF836179 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.485e-68
Identity = 125/208 (60.10%), Postives = 164/208 (78.85%), Query Frame = -2
Query:  191 IGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAMSNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVGELINADQVFCTGTAVVVAPVGSITYQNKRVEF-KTGSRSVYQELYSTFVGIQTGVIEDKKGWTVEV 811
            +G+G VLGL PAPEYTFL + SPVGNYFKEG AP+NL +E EF RA PGG GGVK + NYA VLKA   AK++G+SDVLYLD ++++ +EEVSSCNIF+VK NVISTP   GTIL GITR+S+IE+AR  G++VEER + V EL+ AD+VFCTGTAVV++PVGSITY+++R  + + G  +V ++LY++   +Q G+ ED   WTV++
Sbjct:  207 MGTGAVLGLAPAPEYTFLIFVSPVGNYFKEGVAPINLIVETEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCLHKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSIIEVARSQGFKVEERNVTVDELVEADEVFCTGTAVVLSPVGSITYKSQRFSYGEDGFGTVSKQLYTSLTSLQMGLSEDNMNWTVQL 414          
BLAST of CF836179 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.045e-66
Identity = 116/207 (56.04%), Postives = 163/207 (78.74%), Query Frame = -2
Query:  191 IGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAMSNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVGELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQELYSTFVGIQTGVIEDKKGWTVEV 811
            +GSG  LG+ PAPEYTFL YASPVG+Y K  S  LNL ++ ++ RA  GG GGVK+ +NY+PV+K+L+ AKS GFSDVL+LD+   +N+EE+++CNIF+VKGN++STP T+GTIL G+TR+S+ E+A D GYQVEER + V EL+ A++VFCTGTAVVV  V ++T+ +K+V+++TG  ++  +L+S    IQ GV+EDKKGW V++
Sbjct:  146 LGSGATLGVAPAPEYTFLIYASPVGDYHKVSSG-LNLKVDHKYHRAHSGGTGGVKSCTNYSPVVKSLLEAKSAGFSDVLFLDAATGRNIEELTACNIFIVKGNIVSTPPTSGTILPGVTRKSISELAHDIGYQVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKYRTGEAALSTKLHSMLTNIQMGVVEDKKGWMVDI 351          
BLAST of CF836179 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.424e-65
Identity = 118/207 (57.00%), Postives = 159/207 (76.81%), Query Frame = -2
Query:  191 IGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAMSNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVGELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQELYSTFVGIQTGVIEDKKGWTVEV 811
            IG+G VLG+  APEYTFL Y SPVGNY K  S  LNL ++    RA  GG GGVK+ +NY+PV+K+LI AKS GFSDVL+LD+   KN+EEVS+CNIF++KGN++STP T+GTIL GITR+S+ E+ARD GY+V+ER + V EL+ A++VFCTGTAVV+  V ++T+ +KRV+++TG  +   +L+     IQ GV+EDKKGW +E+
Sbjct:  149 IGTGAVLGVASAPEYTFLIYTSPVGNYHKASSG-LNLKVDHNHRRAHFGGTGGVKSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEEVSTCNIFILKGNIVSTPPTSGTILPGITRKSICELARDIGYEVQERDLSVDELLEAEEVFCTGTAVVIKAVETVTFHDKRVKYRTGEEAFSTKLHLILTNIQMGVVEDKKGWMMEI 354          
BLAST of CF836179 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 7.894e-62
Identity = 111/206 (53.88%), Postives = 151/206 (73.30%), Query Frame = -2
Query:  191 GSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAMSNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVGELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQELYSTFVGIQTGVIEDKKGWTVEV 808
            GSGP+LG  P PE TF A+A PVG Y K+ S  LNL IE++F RA P G GGVK+++NY PV   L  AK +GFSD+L+LD+   KN+EE+ + N+F++KGNV+STP   GTIL G+TR  V+E+ RD+GYQVEER IP+ + ++AD+ FCTGTA +V  + S+T+++K+  FKTG  ++  +LY T   IQTG +ED KGWTVE+
Sbjct:  146 GSGPILGSFPIPETTFTAFACPVGRYHKDNSG-LNLKIEDQFRRAFPSGTGGVKSITNYCPVWIPLAEAKKQGFSDILFLDAATGKNIEELFAANVFMLKGNVVSTPTIAGTILPGVTRNCVMELCRDFGYQVEERTIPLVDFLDADEAFCTGTASIVTSIASVTFKDKKTGFKTGEETLAAKLYETLSDIQTGRVEDTKGWTVEI 350          
BLAST of CF836179 vs. ExPASy Swiss-Prot
Match: ILVE2_BACSU (Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis GN=ilvK PE=1 SV=5)

HSP 1 Score: 180.259 bits (456), Expect = 1.145e-44
Identity = 95/214 (44.39%), Postives = 130/214 (60.75%), Query Frame = -2
Query:  191 IGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAMSNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVGELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTFVGIQTGVIEDKKGWTVEV 811
            I + P LG+  +  Y  L   SPVG+Y+KEG  P+ + +E EFVRA  GG G  K   NYA  LKA   A+ +GFS VL+LD + +K +EEV S NIF      I TP  NG+ILEGITR SVI + + +G QV ER I + E+I A      ++ F TGTA V++PVG + +Q++ +    G +  + ++LY T  GIQ G + D+ GWT EV
Sbjct:  143 IATEPFLGVAASHTYKLLIILSPVGSYYKEGIKPVKIAVESEFVRAVKGGTGNAKTAGNYASSLKAQQVAEEKGFSQVLWLDGIEKKYIEEVGSMNIFFKINGEIVTPMLNGSILEGITRNSVIALLKHWGLQVSERKIAIDEVIQAHKDGILEEAFGTGTAAVISPVGELIWQDETLSINNGETGEIAKKLYDTITGIQKGAVADEFGWTTEV 356          
BLAST of CF836179 vs. ExPASy Swiss-Prot
Match: ILVE_STAES (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ilvE PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.388e-42
Identity = 93/212 (43.87%), Postives = 130/212 (61.32%), Query Frame = -2
Query:  185 VLGLGPAPEYTFLAYASPVGNYFKEGSAP-LNLYIEEEFVRAAPGGAGGVKAMSNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVGELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTGS-RSVYQELYSTFVGIQTGVIEDKKGWTVEV*K 796
            VLG+  + +Y  L   SP G Y+   +     +Y+E+E+VRA  GG G  K   NYA  L A   A   G+  VL+LD V +K VEEV S NIF V+   + TPA NG+IL GITR+S+I++A D GY+VEER + + EL NA       +VF +GTA V++PVG++ Y+++ +         + Q+LY T+ GIQ+G +EDK GW VEV K
Sbjct:  146 VLGVRSSHQYKLLIILSPSGAYYGGDTLKSTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYVEEVGSMNIFFVENGKVVTPALNGSILPGITRKSIIQLAEDLGYEVEERRVSIEELFNAYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNEPGKITQKLYDTYTGIQSGKLEDKYGWRVEVPK 357          
BLAST of CF836179 vs. ExPASy Swiss-Prot
Match: ILVE_STAEQ (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ilvE PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.119e-42
Identity = 92/212 (43.40%), Postives = 130/212 (61.32%), Query Frame = -2
Query:  185 VLGLGPAPEYTFLAYASPVGNYFKEGSAP-LNLYIEEEFVRAAPGGAGGVKAMSNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVGELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTGS-RSVYQELYSTFVGIQTGVIEDKKGWTVEV*K 796
            +LG+  + +Y  L   SP G Y+   +     +Y+E+E+VRA  GG G  K   NYA  L A   A   G+  VL+LD V +K VEEV S NIF V+   + TPA NG+IL GITR+S+I++A D GY+VEER + + EL NA       +VF +GTA V++PVG++ Y+++ +         + Q+LY T+ GIQ+G +EDK GW VEV K
Sbjct:  146 ILGVRSSHQYKLLIILSPSGAYYGGDTLKSTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYVEEVGSMNIFFVENGKVVTPALNGSILPGITRKSIIQLAEDLGYEVEERRVSIEELFNAYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNEPGKITQKLYDTYTGIQSGKLEDKYGWRVEVPK 357          
The following BLAST results are available for this feature:
BLAST of CF836179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
BCAT2_ARATH1.688e-8875.85Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT3_ARATH1.029e-6961.54Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT1_ARATH6.667e-6964.08Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT5_ARATH1.485e-6860.10Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT6_ARATH4.045e-6656.04Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT7_ARATH3.424e-6557.00Putative branched-chain-amino-acid aminotransferas... [more]
BCAT4_ARATH7.894e-6253.88Probable branched-chain-amino-acid aminotransferas... [more]
ILVE2_BACSU1.145e-4444.39Branched-chain-amino-acid aminotransferase 2 OS=Ba... [more]
ILVE_STAES2.388e-4243.87Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAEQ3.119e-4243.40Probable branched-chain-amino-acid aminotransferas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02I21_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02I21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836179 ID=CF836179; Name=CF836179; organism=Citrus sinensis; type=EST; length=812bp
TTTTTTTTTTTTTTTTCCACGAGTTAATGTTCATATTTCTTTCATCTTTA
AAACCAGCTTTGTGGGATTTAAAAATACATGGAACCTTTTATTTTTTACC
TTACATAATATGGGGCCAACAGCATTTTGTAACGACATTCTGTAAGTAAG
CATAGCATTAACATTATTGGTGTTTAAACTTTGATTTTTAAACCTCGACA
GTCCATCCTTTCTTATCCTCAATAACACCCGTTTGAATTCCTACGAAAGT
TGAGTACAATTCCTGATACACCGAGCGTGACCCCGTTTTAAATTCAACTC
TTTTATTTTGATATGTGATACTGCCCACTGGAGCAACAACTACAGCGGTT
CCAGTGCAAAATACTTGGTCGGCATTGATCAGTTCGCCCACAGGAATAAC
ACGTTCCTCAACCTGATAGCCATAATCCCTGGCAATTTCAATTACACTTC
TTCTGGTAATCCCTTCTAGAATAGTTCCATTTGTAGCGGGAGTTGAAATT
ACATTGCCCTTTACAACAAAAATGTTACAAGAAGAGACTTCCTCCACATT
TTTCCTATTGACCGAGTCAAGGTACAAGACATCCGAAAATCCTCTGCTCT
TGGCTCGGATTAATGCTTTCAGAACAGGAGCATAATTGCTCATTGCTTTT
ACCCCTCCAGCGCCACCGGGGGCAGCACGAACAAATTCCTCTTCAATGTA
CAAATTCAGTGGTGCCGAACCTTCCTTGAAATAGTTTCCGACAGGGGAGG
CATATGCGAGGAAAGTGTATTCAGGTGCTGGACCCAAACCCAACACAGGG
CCGCTTCCTATG
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