CF836193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836193 vs. ExPASy Swiss-Prot
Match: SERA_ARATH (D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At1g17745 PE=1 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.135e-49 Identity = 108/163 (66.26%), Postives = 125/163 (76.69%), Query Frame = 1 Query: 205 YTTPPSFT-IRNSLQTALETSELPVSKFQ----DDLNLQAVTPKPTILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQAD 678 Y T T I +L+T +T+ ++F D PKP ILV+EKLGEAG+ +LR FG+V+C YDLSPE L +K+++ DALIVRSGTKVTR VFEAA G+LKVVGRAGVGIDNVDLQAATE GCLVVNAP ANTVAAAEHGIALLASMARNV+QAD Sbjct: 39 YATSVKLTAISAALKTVEQTTLTEDNRFSTVGSDSDEYNPTLPKPRILVTEKLGEAGVNLLREFGDVDCSYDLSPEDLKKKVAESDALIVRSGTKVTREVFEAAKGRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQAD 201
BLAST of CF836193 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25 Identity = 62/116 (53.45%), Postives = 81/116 (69.83%), Query Frame = 1 Query: 328 ILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQA 675 ILV++ L E + IL G VE L+ E L EKI D L+VRSGTKVTR V E A KLKV+GRAGVG+DN+D++AATE G +VVNAP A++++ AE + L+ + ARN+ QA Sbjct: 4 ILVTDPLHEDAIKILEEVGEVEVATGLTKEELLEKIKDADVLVVRSGTKVTRDVIEKAE-KLKVIGRAGVGVDNIDVEAATEKGIIVVNAPDASSISVAELTMGLMLAAARNIPQA 118
BLAST of CF836193 vs. ExPASy Swiss-Prot
Match: SERA_METTH (D-3-phosphoglycerate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=serA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.871e-22 Identity = 51/117 (43.59%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 328 ILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQAD 678 +L+++ + E G++ L V ++PE L + I DA++VRS TKVTR V EAA +LK++ RAGVG+DNVD++AAT+ G +V+NAP + ++ AEH I L+ ++AR ++ AD Sbjct: 6 VLIADSINEKGISELEEVAEVVVNTTITPEELLDAIKDFDAIVVRSRTKVTREVIEAAP-RLKIIARAGVGVDNVDVKAATDRGIMVINAPESTSITVAEHSIGLMLALARKIAIAD 121
BLAST of CF836193 vs. ExPASy Swiss-Prot
Match: SERA_SYNY3 (D-3-phosphoglycerate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=serA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21 Identity = 48/117 (41.03%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 328 ILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQAD 678 +LVS+ + + G+ IL+ V+ LS + + + + DA+++RS TKVT + +A + +LK++GRAGVG+DN+D+ AAT G +VVN+P NT+AAAEH +A++ ++AR++ A+ Sbjct: 32 VLVSDSIDQVGIDILKQVAQVDVKTGLSEAEIIDIVPEYDAIMLRSATKVTEKIIQAGS-QLKIIGRAGVGVDNIDVPAATRQGIVVVNSPEGNTIAAAEHALAMMMALARHIPDAN 147
BLAST of CF836193 vs. ExPASy Swiss-Prot
Match: SERA_ARCFU (D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus GN=serA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.914e-21 Identity = 54/118 (45.76%), Postives = 79/118 (66.95%), Query Frame = 1 Query: 328 ILVSEKLGEAGLAILRSFG-NVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQAD 678 +LV+E + E + +R G VE +S E L ++ + +A++VRS TKV V +AA LK++GRAGVG+DN+D+ AAT+ G +VVNAP NT++ AEH IAL+ + AR + QAD Sbjct: 3 VLVAEPISEEAIDYMRKNGLEVEVKTGMSREELIREVPKYEAIVVRSQTKVDAEVIQAAKN-LKIIGRAGVGVDNIDINAATQRGIVVVNAPGGNTISTAEHAIALMLAAARKIPQAD 119
BLAST of CF836193 vs. ExPASy Swiss-Prot
Match: SERA_MYCLE (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae GN=serA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 53/119 (44.54%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 322 PTILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQAD 678 P +L+++KL ++ +A L V + L + + DAL+VRS T V V AA KLK+V RAGVG+DNVD+ AAT G LVVNAP +N +AAEH +ALL + +R +++AD Sbjct: 4 PVVLIADKLAQSTVAALGDQVEVRWVDGPDRTKLLAAVPEADALLVRSATTVDAEVLAAAP-KLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIAEAD 121
BLAST of CF836193 vs. ExPASy Swiss-Prot
Match: SERA_RAT (D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 56/117 (47.86%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 328 ILVSEKLGEAGLAILRSFG-NVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQA 675 IL+S+ L IL+ G V +LS E L ++ C+ LIVRS TKVT V AA KL+VVGRAG G+DNVDL+AAT G LV+N P N+++AAE +L +AR + QA Sbjct: 9 ILISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAAE-KLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMLMCLARQIPQA 124
BLAST of CF836193 vs. ExPASy Swiss-Prot
Match: SERA_MYCTU (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis GN=serA PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 53/119 (44.54%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 322 PTILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQAD 678 P +L+++KL + +A L V + + L + + DAL+VRS T V V AA KLK+V RAGVG+DNVD+ AAT G LVVNAP +N +AAEH +ALL + +R + AD Sbjct: 4 PVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVLAAAP-KLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAAD 121
BLAST of CF836193 vs. ExPASy Swiss-Prot
Match: SERA_MYCBO (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis GN=serA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 53/119 (44.54%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 322 PTILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQAD 678 P +L+++KL + +A L V + + L + + DAL+VRS T V V AA KLK+V RAGVG+DNVD+ AAT G LVVNAP +N +AAEH +ALL + +R + AD Sbjct: 4 PVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVLAAAP-KLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAAD 121
BLAST of CF836193 vs. ExPASy Swiss-Prot
Match: SERA_BACSU (D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis GN=serA PE=3 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 49/117 (41.88%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 328 ILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQAD 678 +LVS+K+ GL L +E + +A +++ DAL+VRS TKVT +F LK+VGRAGVG+DN+D+ AT+ G +V+NAP NT++ AEH A+++S+ R++ QA+ Sbjct: 4 VLVSDKMSNDGLQPLIESDFIEIVQKNVADAE-DELHTFDALLVRSATKVTEDLFNKMTS-LKIVGRAGVGVDNIDIDEATKHGVIVINAPNGNTISTAEHTFAMISSLMRHIPQAN 118 The following BLAST results are available for this feature:
BLAST of CF836193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836193 ID=CF836193; Name=CF836193; organism=Citrus sinensis; type=EST; length=679bpback to top |