CF836206

Overview
NameCF836206
Unique NameCF836206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3988 contig Csv1_Contig3988:1..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836206 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.932e-67
Identity = 128/158 (81.01%), Postives = 139/158 (87.97%), Query Frame = -3
Query:  352 ANDAKAGKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 825
            ANDAKA KKGGERQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFGMYDSLKPV+LT  MQDSF ASF+LGW IT GA LASYPIDTVRRRMMMTSG+AVKYKSSL AF +I+KNEG KSLFKGAG+NILR         GYDKLQL++F
Sbjct:  220 ANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSMQDSFFASFVLGWLITNGAALASYPIDTVRRRMMMTSGKAVKYKSSLDAFSQILKNEGGKSLFKGAGSNILRAIAGAGVLAGYDKLQLIVF 377          
BLAST of CF836206 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.448e-66
Identity = 128/157 (81.53%), Postives = 137/157 (87.26%), Query Frame = -3
Query:  355 ANDAKAGKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVL 825
            AND KA KKGGERQFNGL+DVYKKTLKSDGIAGLYRGF+ISCVGIIVYRGLYFGMYDSLKPV+LT  +QDSF ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSSL AF +I+KNEG KSLFKGAGANILR         GYDKLQ+++
Sbjct:  220 ANDRKASKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGNLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQIVKNEGPKSLFKGAGANILRAVAGAGVLAGYDKLQVLV 376          
BLAST of CF836206 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.175e-66
Identity = 126/158 (79.75%), Postives = 137/158 (86.71%), Query Frame = -3
Query:  352 ANDAKAGKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 825
            ANDAKA K GGERQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFGMYDSLKPVVLT  +QD+F ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSS+ AF +I+KNEG KSLFKGAGANILR         GYD+LQ++ F
Sbjct:  216 ANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGSLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 373          
BLAST of CF836206 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 1.587e-65
Identity = 125/158 (79.11%), Postives = 137/158 (86.71%), Query Frame = -3
Query:  352 ANDAKAGKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 825
            ANDAKA K GGERQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFG+YDS+KPVVLT  +QD+F ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSSL AFQ+I+K EG KSLFKGAGANILR         GYD+LQ++ F
Sbjct:  221 ANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSIKPVVLTGNLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 378          
BLAST of CF836206 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 3.535e-65
Identity = 124/158 (78.48%), Postives = 137/158 (86.71%), Query Frame = -3
Query:  352 ANDAKAGKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 825
            ANDAKA K GG+RQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFG+YDS+KPVVLT  +QD+F ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSSL AFQ+I+K EG KSLFKGAGANILR         GYD+LQ++ F
Sbjct:  221 ANDAKAAKGGGDRQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSIKPVVLTGSLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 378          
BLAST of CF836206 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 1.754e-64
Identity = 125/159 (78.62%), Postives = 139/159 (87.42%), Query Frame = -3
Query:  352 ANDAKAGKKGGE-RQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 825
            ANDAKA KKGG  RQF+GL+DVY+KTLK+DGIAGLYRGF+ISCVGIIVYRGLYFG+YDS+KPV+LT  +QDSF ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSSL AF++I+KNEG KSLFKGAGANILR         GYDKLQL++F
Sbjct:  214 ANDAKAAKKGGGGRQFDGLVDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGLYDSVKPVLLTGDLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLSGYDKLQLIVF 372          
BLAST of CF836206 vs. ExPASy Swiss-Prot
Match: ADT_CHLRE (ADP,ATP carrier protein OS=Chlamydomonas reinhardtii GN=ABT PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.992e-64
Identity = 121/158 (76.58%), Postives = 137/158 (86.71%), Query Frame = -3
Query:  355 ANDAKAGKKGG-ERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVL 825
            ANDAK+ KKGG +RQFNGL+DVY+KT+ SDGIAGLYRGF+ISCVGI+VYRGLYFGMYDSLKPVVL   + ++FLA+FLLGWGITIGAGLASYPIDT+RRRMMMTSG AVKY SS H FQEI+KNEG KSLFKGAGANILR         GYD+LQ++L
Sbjct:  141 ANDAKSAKKGGGDRQFNGLVDVYRKTIASDGIAGLYRGFNISCVGIVVYRGLYFGMYDSLKPVVLVGPLANNFLAAFLLGWGITIGAGLASYPIDTIRRRMMMTSGSAVKYNSSFHCFQEIVKNEGMKSLFKGAGANILRAVAGAGVLAGYDQLQVIL 298          
BLAST of CF836206 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 3.908e-64
Identity = 124/159 (77.99%), Postives = 136/159 (85.53%), Query Frame = -3
Query:  352 ANDAKAGKKGG-ERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 825
            AND+K+ KKGG ERQFNGL+DVYKKTLKSDGIAGLYRGF+ISC GIIVYRGLYFG+YDS+KPV+LT  +QDSF ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSS  AF +I+K EG KSLFKGAGANILR         GYDKLQL++F
Sbjct:  218 ANDSKSAKKGGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCAGIIVYRGLYFGLYDSVKPVLLTGDLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIVKKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVF 376          
BLAST of CF836206 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 5.104e-64
Identity = 124/159 (77.99%), Postives = 137/159 (86.16%), Query Frame = -3
Query:  352 ANDAKAGKKGGE-RQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 825
            ANDAKA KKGG  RQF+GL+DVY+KTLKSDG+AGLYRGF+ISCVGIIVYRGLYFGMYDSLKPV+LT  M+DSF ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSS  AF +I+KNEG KSLFKGAGAN+LR         GYDKLQ+++F
Sbjct:  219 ANDAKAAKKGGGGRQFDGLVDVYRKTLKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMEDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFNQILKNEGPKSLFKGAGANVLRAVAGAGVLAGYDKLQVIVF 377          
BLAST of CF836206 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 5.104e-64
Identity = 124/158 (78.48%), Postives = 135/158 (85.44%), Query Frame = -3
Query:  352 ANDAKAGKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 825
            ANDAKA K GGERQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFG+YDSLKPV+LT  +Q  F ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSSL AFQ+I+K EG KSLFKGAGANILR         GYD+LQ++ F
Sbjct:  165 ANDAKASKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSLKPVLLTGTLQVCFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 322          
The following BLAST results are available for this feature:
BLAST of CF836206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
ADT1_GOSHI4.932e-6781.01ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT1_SOLTU2.448e-6681.53ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT_ORYSJ4.175e-6679.75ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT1_MAIZE1.587e-6579.11ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT2_MAIZE3.535e-6578.48ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT1_ARATH1.754e-6478.62ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT_CHLRE2.992e-6476.58ADP,ATP carrier protein OS=Chlamydomonas reinhardt... [more]
ADT2_ARATH3.908e-6477.99ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT2_SOLTU5.104e-6477.99ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT1_WHEAT5.104e-6478.48ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02J13_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836206 ID=CF836206; Name=CF836206; organism=Citrus sinensis; type=EST; length=827bp
TTTTTTTTTTTTTTGATAATTTCGTCATCATGTTAAAAACATCACCTTTA
AAGAACACAAACACCATTAACATAAAAGAAGCATCCCTTAACAGATAATA
ATTTCAAGTGAAAACTATTTAAATTATTATCACAACACTTGAGTCTAGTG
CTCAAGCACAAAAACACTCAAATTCAAACAGTTCTTTGACGACTATAATC
TTTTCTTTTATCAAATCCCTAAAAACCGGATAAATATTAATAACACTATC
GATCATCCAAAATTATTCAAACTTGAGAAGAGCACCTATAGAATTTTCAC
CAACATCTTGTACAAGTATTAACCGCCACCACCGGATCCGTATTTCTTGC
CAAATAGAACCAGCTGCAGCTTGTCATAACCGGCAAGCACACCAGCACCT
GCCACAGCACGCAGAATGTTTGCACCAGCACCTTTGAAGAGTGATTTAGT
GCCTTCATTCTTTATAATTTCCTGGAATGCATGCAAAGAGCTCTTGTACT
TCACAGCTTCTCCAGAGGTCATCATCATCCTTCTACGCACCGTATCAATT
GGGTAAGAAGCCAAACCAGCACCAATTGTGATTCCCCAGCCAAGTAAGAA
GCTAGCCAAGAAACTATCCTGCATCCCATCAGTCAACACCACAGGTTTTA
GAGAATCGTACATTCCAAAGTAGAGCCCACGATACACTATAATTCCAACA
CATGAGATGCTGAATCCACGGTAGAGCCCAGCAATGCCATCAGATTTCAG
AGTCTTCTTGTAGACATCAATCAAACCATTAAACTGCCTTTCCCCACCCT
TTTTACCTGCCTTAGCATCATTTGCCA
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