CF836207

Overview
NameCF836207
Unique NameCF836207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1975 contig Csv1_Contig1975:22..761. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.308e-81
Identity = 160/245 (65.31%), Postives = 180/245 (73.47%), Query Frame = 3
Query:   42 MAD-GSYPSVFQKMQGQSYFIS-----------GVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVY 740
            MAD   +P+VFQK   Q    S           GV P +Y  +++  G++ N G Q     A+Q   L + S  SP+FVQAP EK  ++F  DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRLS PYKGI +CFGRT+K+EG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLAND KA+KKGGERQFNGL+DVY
Sbjct:    1 MADMNQHPTVFQKAANQLDLRSSLSQDVHARYGGVQPAIYQRHFAY-GNYSNAGLQRG--QATQDLSL-ITSNASPVFVQAPQEKGFAAFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLSEPYKGIGECFGRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDRKASKKGGERQFNGLVDVY 241          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.972e-81
Identity = 157/244 (64.34%), Postives = 180/244 (73.77%), Query Frame = 3
Query:   45 ADGSYPSVFQKMQGQSYFISGVSPNLYAHNYSVA-----------GSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKK-GGERQFNGLIDVY 740
            AD  +P+V+QK+  Q +  S +S +++A    +            G++ N G Q     A+Q   L + +  SP+FVQAP EK L++F  DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCF RT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAKK GG RQF+GL+DVY
Sbjct:    1 ADNQHPTVYQKVASQMHLSSSLSQDVHARYGGIQRPALSQRRFPYGNYSNAGLQTC--QATQDLSL-IAANASPVFVQAPQEKGLAAFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFSRTIKDEGFAALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGGAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVY 241          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 8.481e-81
Identity = 164/240 (68.33%), Postives = 176/240 (73.33%), Query Frame = 3
Query:   57 YPSVFQKMQGQ-----------SYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALV-SPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVY 740
            +PSV QK+ GQ            Y  S  SP LY    +  G++ N   Q+   A      L++V S  S I VQAP+EK  SSF +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS PYKGI DCF RT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAKKGGERQFNGL+DVY
Sbjct:    6 HPSVMQKVAGQLFRSSHSQDFQGYNGSFRSPALYQRR-AAYGNYSNAALQHPVRAFGD---LSMVPSTASAICVQAPAEKGFSSFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVY 241          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 3.223e-80
Identity = 157/242 (64.88%), Postives = 175/242 (72.31%), Query Frame = 3
Query:   42 MAD-GSYPSVFQKMQGQSYFISGVSPNLYAHNYSVAGS-----FVNRGSQN-SFWAASQGTGLALVSPV--SPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVY 740
            MAD  + P+V  K+ GQ +  S  S  + A N   + S     F  R     S W  S      +  PV  +P+F  AP+EK   +F++DF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS PYKGI+DCF RT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAK GG+RQFNGL+DVY
Sbjct:    1 MADQANQPTVLHKLGGQFHLSSSFSEGVRARNICPSFSPYERRFATRNYMTQSLWGPSMSVSGGINVPVMPTPLFANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIADCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGDRQFNGLVDVY 242          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 4.209e-80
Identity = 154/231 (66.67%), Postives = 173/231 (74.89%), Query Frame = 3
Query:   60 PSVFQKMQGQSYFISGVSPNLYAHNYSVA-GSFVNRGSQNSFWA---ASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVY 740
            P+V QK  GQ +  S  S  + A N   +  S+  R +  S+      + G  + ++S  SPIF  AP+EK   +F++DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD+DGYWKWF GN             FVYSLDYARTRLANDAKAAK GGERQFNGL+DVY
Sbjct:    8 PTVLQKFGGQFHLGSSFSEGVRARNICPSVSSYDRRFTTRSYMTQGLVNGGINVPMMSS-SPIFANAPAEKGGKNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGERQFNGLVDVY 237          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 1.225e-79
Identity = 152/240 (63.33%), Postives = 177/240 (73.75%), Query Frame = 3
Query:   57 YPSVFQKMQGQ-----------SYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKK-GGERQFNGLIDVY 740
            +P++ QK+ GQ            Y  +   P  Y   ++  G++ N   Q    AASQ     + +  SP+FVQAP EK  ++F +DF+MGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRL+ PYKGI DCFGRT++DEGI SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD+DGYWKWFAGN             FVYSLDYARTRLAND+K+AKK GGERQFNGL+DVY
Sbjct:    7 HPTILQKVSGQLLSSSVSQDIRGYASASKRPATY-QKHAAYGNYSNAAFQYPLVAASQ-----IATTTSPVFVQAPGEKGFTNFAIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLTEPYKGIRDCFGRTIRDEGIGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKSAKKGGGERQFNGLVDVY 240          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 295.049 bits (754), Expect = 2.728e-79
Identity = 157/242 (64.88%), Postives = 176/242 (72.73%), Query Frame = 3
Query:   42 MAD-GSYPSVFQKMQGQSYFISGVSPNLYAHNYSVAGSFVNR--GSQN----SFWAASQGTGLALVSPV--SPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVY 740
            MAD  + P+V  K+ GQ +  S +S  + A N   + S   R   ++N    S W  S      +  PV  +P+   AP+EK   +F++DF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS PYKGI DCF RT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAK GGERQFNGL+DVY
Sbjct:    1 MADQANQPTVLHKLGGQFHLRSIISEGVRARNICPSVSSYERRFATRNYMTQSLWGPSMSVSGGINVPVMQTPLCANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIVDCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGERQFNGLVDVY 242          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 3.940e-78
Identity = 155/238 (65.13%), Postives = 174/238 (73.11%), Query Frame = 3
Query:   57 YPSVFQKMQGQSYFISGVS---------PNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKK-GGERQFNGLIDVY 740
            +P++ QK  GQ +  S VS         P++Y   ++  G++ N   Q         T   L +  SP+FVQ P EK  ++F +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAKK GG RQF+GL+DVY
Sbjct:    7 HPTIAQKAAGQ-FMRSSVSKDVQVGYQRPSMY-QRHATYGNYSNAAFQ------FPPTSRMLATTASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVY 236          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.401e-75
Identity = 139/182 (76.37%), Postives = 152/182 (83.52%), Query Frame = 3
Query:  198 GTGLALVSPVSPIFVQAPSEKS-LSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVY 740
            G  + ++SP SP+F  AP EK  + +F +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKR+FNFKKD+DGYWKWF GN             FVYSLDYARTRLANDAKA+K GGERQFNGL+DVY
Sbjct:    6 GISVPIMSP-SPMFANAPPEKKGVKNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYARTRLANDAKASKGGGERQFNGLVDVY 186          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT2_WHEAT (ADP,ATP carrier protein 2, mitochondrial OS=Triticum aestivum GN=ANT-G2 PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.507e-74
Identity = 134/172 (77.91%), Postives = 145/172 (84.30%), Query Frame = 3
Query:  228 SPIFVQAPSEKS-LSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVY 740
            SP+F  AP EK  + +F +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKR+FNFKKD+DGYWKWF GN             FVYSLDY RTRLANDAKA+K GG+RQFNGL+DVY
Sbjct:   15 SPLFANAPPEKKGVKNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYGRTRLANDAKASKGGGDRQFNGLVDVY 186          
The following BLAST results are available for this feature:
BLAST of CF836207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
ADT1_SOLTU1.308e-8165.31ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT2_SOLTU4.972e-8164.34ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT1_GOSHI8.481e-8168.33ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT2_MAIZE3.223e-8064.88ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT_ORYSJ4.209e-8066.67ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT2_ARATH1.225e-7963.33ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT1_MAIZE2.728e-7964.88ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT1_ARATH3.940e-7865.13ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT1_WHEAT1.401e-7576.37ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]
ADT2_WHEAT4.507e-7477.91ADP,ATP carrier protein 2, mitochondrial OS=Tritic... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_02J13_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836207 ID=CF836207; Name=CF836207; organism=Citrus sinensis; type=EST; length=740bp
CACTAGGCGACCTTCTCAGGTCACCATCTTCAGCTGCAAACATGGCAGAT
GGATCGTATCCATCCGTATTTCAGAAAATGCAAGGCCAGTCATACTTCAT
TTCTGGGGTCTCCCCCAATTTGTATGCCCACAACTACAGTGTGGCAGGTT
CCTTTGTTAATAGAGGATCACAGAATTCTTTTTGGGCAGCAAGTCAGGGA
ACTGGCCTGGCACTTGTGTCTCCTGTTTCTCCTATATTCGTACAAGCTCC
ATCAGAAAAAAGTCTTTCTTCTTTTTTGGTGGATTTTCTCATGGGAGGAG
TTTCAGCAGCTGTTTCCAAGACTGCAGCTGCTCCTATTGAGCGGGTTAAG
CTTTTGATTCAGAATCAAGATGAGATGATCAAGAGTGGTCGGCTCTCGCA
TCCGTACAAGGGGATTTCTGATTGCTTTGGTAGAACTGTTAAGGATGAAG
GCATACTATCTCTTTGGAGAGGCAACACTGCCAATGTTATCAGATACTTC
CCTACCCAGGCCCTGAACTTTGCATTCAAGGATTACTTTAAGAGGCTGTT
TAACTTCAAGAAAGACAGAGATGGCTACTGGAAGTGGTTTGCTGGGAACT
TGGCATCTGGTGGGGCTGCTGGTGCTTCATCGCTTCTTTTTGTGTATTCG
CTTGACTATGCAAGAACACGTTTGGCAAATGATGCTAAGGCAGCTAAAAA
GGGTGGGGAAAGGCAGTTTAATGGTTTGATTGATGTCTAC
back to top