CF836211

Overview
NameCF836211
Unique NameCF836211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF836211_ssr495 microsatellite CF836211_ssr495:495..506. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12843 contig Csv1_Contig12843:634..1416. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.927e-48
Identity = 94/163 (57.67%), Postives = 112/163 (68.71%), Query Frame = -2
Query:  204 MAEEHRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLIS---SSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTAA----NRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQKI 671
            MAEEHR Q PRLC NNCGFFGS  TQNLCSKCFRDLQ + Q SS+AKHAL Q+L +   ++S  +S    P  D                  ++        RC+TCRRRVG+TGF+CRCG VFCGTHRY EQH CSFDFK MGK++IA+ANP+VKA+KL+KI
Sbjct:    1 MAEEHRLQEPRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLAAVGAAASSSVSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI 163          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.710e-42
Identity = 90/170 (52.94%), Postives = 108/170 (63.53%), Query Frame = -2
Query:  204 MAEEHRCQAP---RLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSA-----KHALNQTLISSSSVDLS------LRERPATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQKI 671
            MAEEHRCQ P   RLCVNNCGF GS  T NLCS C+ DL LK QQ SS+     + +L+ +  SSSS ++S      L + P+                    Q    NRC TCR+RVGLTGFKCRCG++FCG HRYPE H CS+DFK  G+E+IA+ANP+VKA KLQKI
Sbjct:    1 MAEEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVSPPSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.726e-39
Identity = 83/166 (50.00%), Postives = 101/166 (60.84%), Query Frame = -2
Query:  204 MAEEHRCQAP---RLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTL-------ISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQKI 671
            MAEEHRC+ P   RLCVNNCGFFGS  T NLCS C+ DL LK QQ +S K  +  +L       + + + +L +   P T                   Q    NRC  CR+RVGLTGF CRCG+ FCG+HRYPE H C+FDFK  G+E+IA+ANP+V A KLQKI
Sbjct:    1 MAEEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVIAPVLENYAAELEI---PTTKKTEEKKPIQIPTEQPSPPQRP--NRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.892e-35
Identity = 68/153 (44.44%), Postives = 95/153 (62.09%), Query Frame = -2
Query:  204 PRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQS------TAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQKI 644
            P+LCV  CGFFGSP+  NLCSKC+RD++   +Q++SAK A+ ++L  +       + +  T                    +      + A RC++C ++VG+TGFKCRCGS FCGTHRYPE H C FDFK + +E IA+ANPVVKA+K+ +I
Sbjct:   16 PKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP5_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica GN=SAP5 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.111e-33
Identity = 77/163 (47.24%), Postives = 95/163 (58.28%), Query Frame = -2
Query:  210 MAEEHRCQ--APRLCVNNCGFFGSPTTQNLCSKCFRDLQ-------LKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQ 671
            MAEE R Q    RLC NNCGFFGSP T +LCSKC+RD Q       +    ++SA  A + +  SSSS    L    A +                      A+RC +CR+RVGLTGF CRCG  FCG HRYPE+HAC FDFK  G++ IARANP++K +KL+
Sbjct:    1 MAEEQRWQEGCHRLCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSPSSSSCPAFLPSSTAAEAGVVVAAV------------AKASRCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKLK 151          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP9_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.895e-33
Identity = 68/163 (41.72%), Postives = 94/163 (57.67%), Query Frame = -2
Query:  207 EHRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTA-----------ANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQK 662
            + +   P+LCV  CGFFGSP+  +LCSKC+R +  +  Q++ AK A+ ++   S    L + E PA                     S              NRC+ C ++VG+ GFKC+CGS FCG HRYPE H CSFDFKE+G+ +IA+ANPVVKA+K+Q+
Sbjct:   13 QSQASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQR 175          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.895e-33
Identity = 69/160 (43.12%), Postives = 97/160 (60.62%), Query Frame = -2
Query:  204 PRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTL-ISSSSVDLSLRERP------------ATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQKI 644
            P+LC N CGFFGSP+  NLCSKC+R L+ +  Q++ AK A+  +L + S S+    ++ P             T                        NRC +C ++VG+ GFKC+CGS FCG+HRYPE+H CSFDFKE+G++ IA+ANP+VKA+K+Q+I
Sbjct:   16 PKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPGQKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.096e-32
Identity = 74/160 (46.25%), Postives = 99/160 (61.88%), Query Frame = -2
Query:  204 KMAEE---HRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQKI 674
            K AEE   H  +AP LCVNNCGFFGS  T+N+CSKC+RD  +KA+  ++      + L S SS  L       TD                  +  + NRC++CR++VGLTGFKCRCG  FC  HRY + H C+FD+K++G+EQIA+ NP+VKA+K+ KI
Sbjct:    8 KEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDT-VKAKTVATVVE--KKPLASLSSTPLVTE---VTDGGSGSVADGKQVMEEDTPKPPS-NRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.040e-31
Identity = 69/152 (45.39%), Postives = 88/152 (57.89%), Query Frame = -2
Query:  204 HRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQKI 659
            H  +AP LCVNNCGFFGS  T N+CSKC+RD       ++        T  SSS   L     PA                    +  + NRC++CR++VGLTGF+CRCG  FC THRY E H C+FD+K+ G++QIA+ NPVV AEK+ KI
Sbjct:   15 HTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKKAFTPASSSKTPLE----PAKPDEVPAAAVEDKQAAQEPPKPPS-NRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.317e-31
Identity = 69/161 (42.86%), Postives = 92/161 (57.14%), Query Frame = -2
Query:  204 QAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSS---------VDL---SLRERPATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQKI 650
            + P+LC NNCGFFGS  T N+CSKC +D+  + +Q +    A++ T  SS+          VD+   S+     +                   +    +RC TC +RVGLTGFKCRCGS+FCGTHRY + H CSF++    +E IA+ANPVVKAEKL KI
Sbjct:   13 EGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGTSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173          
The following BLAST results are available for this feature:
BLAST of CF836211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP3_ARATH7.927e-4857.67Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH1.710e-4252.94Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH6.726e-3950.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ARATH5.892e-3544.44Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ORYSJ1.111e-3347.24Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ARATH1.895e-3341.72Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ARATH1.895e-3343.13Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ2.096e-3246.25Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ1.040e-3145.39Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH2.317e-3142.86Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02J16_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02J16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836211 ID=CF836211; Name=CF836211; organism=Citrus sinensis; type=EST; length=783bp
TTTTTTTTTTTTTTTGTAGTAAAACTTGAAATTATCATCGAATTTTACAT
ACACCACATAATAACACTGCCAACCCCCTCCGGGCCCACCCCTTCGGTTC
CCCCGACCATCACGGCGGCGTCCGACACGAAACGACGCCGTGAAATGCCA
AATTACAAACCAAACGACAGAGAGAAGAATCGTCCGTTCGATTCCATTCA
TCATATCTTTTGAAGCTTCTCAGCCTTCACAACAGGATTTGCCCTCGCAA
TCTGCTCTTTGCCCATCTCTTTGAAATCGAACGAACACGCGTGCTGCTCC
GGGTACCTGTGGGTCCCGCAGAACACCGACCCGCACCTGCACTTGAACCC
CGTGAGCCCCACGCGCCTCCTGCAAGTCATGCACCTGTTCGCCGCCGTCG
ACTGCACCGGAGCGGCCACCTCAGCCGGCGGCTTCTCCGCCTCTGCCGCT
ACCTCCACGTCCGTCGCCGGTCTCTCGCGCAGAGACAAATCAACCGACGA
CGACGAAATCAGGGTTTGGTTAAGGGCGTGTTTGGCCGAGGAAGATTGTT
GTGCTTTCAACTGAAGATCGCGAAAACATTTGGAGCAGAGATTTTGAGTT
GTTGGGCTCCCGAAAAATCCGCAGTTGTTCACGCACAAACGGGGTGCTTG
ACATCTGTGCTCTTCCGCCATCTTCAACCTTTACAGCAAAATTTTCCATT
CCAAATCAGTTGATTGAAATCTTGCAAACTGATATAAAAATTTATAAGAC
TTCGATTTTATCCATATTATTCCTATTTGAAAT
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