CF838389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838389 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.452e-31 Identity = 91/219 (41.55%), Postives = 110/219 (50.23%), Query Frame = 2 Query: 2 KSHPKQPLKVKNEKAEDSSNKAARVEGKEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF--------------XXXXXXXXXXXXKKRCMPS---PELTQPRFETIGTPPAPAPSPWVGFGYQNEFYQ-PRAVDDEFELSQQISSLESFLGLEPLMSQPSGNGAGGYDSVDFWMLDDVAATQQ 604 K HP + VK E + + A GK +K RKNVYRGIR+RPWGKWAAEIRDP KGVRVWLGTFNT K+IRGDKAKLNF KK C+ S EL+QP F P +GFG +EF + +++L QQISSLESFL L+ ++ VD WMLDDV A+ + Sbjct: 47 KLHPTNQVNVKEEAVK---KEQATEPGKRRK----RKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSF----------PVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAEQPSQLDESVSEVDMWMLDDVIASYE 248
BLAST of CF838389 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.405e-18 Identity = 50/95 (52.63%), Postives = 57/95 (60.00%), Query Frame = 2 Query: 2 KSHPKQPLKVKNEKAEDSSNKAARVEGKEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 286 +S P Q V + K + + +GK R RKN+YRGIRQRPWGKWAAEIRDP KGVRVWLGTF T +IRG KAKLNF Sbjct: 16 ESEPSQLGSVSSRKKRKPVSVSEERDGK-----RERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNF 105
BLAST of CF838389 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.140e-18 Identity = 43/66 (65.15%), Postives = 48/66 (72.73%), Query Frame = 2 Query: 89 KKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 286 K +R RKN +RGIRQRPWGKWAAEIRDP KGVRVWLGTFN+ +RIRG KAK+NF Sbjct: 110 KSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNF 175
BLAST of CF838389 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 4.102e-18 Identity = 44/70 (62.86%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 77 EGKEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 286 E EK ++R RKN YRGIRQRPWGKWAAEIRDP KG R WLGTF+T +RIRG KAK+NF Sbjct: 114 EQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNF 183
BLAST of CF838389 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.357e-18 Identity = 42/67 (62.69%), Postives = 46/67 (68.66%), Query Frame = 2 Query: 86 EKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 286 EK R RKN YRGIRQRPWGKWAAEIRDP +G R+WLGTF T +RIRG KAK+NF Sbjct: 114 EKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNF 180
BLAST of CF838389 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.472e-17 Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 77 EGKEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 286 +GK+K++ R Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT KRIRG KAKLNF Sbjct: 16 DGKKKQSSR-----YKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNF 80
BLAST of CF838389 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.319e-16 Identity = 58/141 (41.13%), Postives = 68/141 (48.23%), Query Frame = 2 Query: 83 KEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNFXXXXXXXXXXXXKKRCMPSPELTQPRFETIGTPPAPAP--SPWVGFGYQNEFYQPRAVDDEFELSQQISSLES 499 +EK R R YRG+RQRPWGKWAAEIRDP K RVWLGTF+T RG KAKLNF + PSP + R I TPP+P P +P + F Q R+ D LS + S S Sbjct: 60 QEKSNSRQRN--YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNF-----PEHIRVNPTQLYPSPATSHDRI--IVTPPSPPPPIAPDILLDQYGHF-QSRSSDSSANLSMNMLSSSS 190
BLAST of CF838389 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.319e-16 Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 2 Query: 47 EDSSNKAARVEGKEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 286 E+S +KA E +EKK + YRG+RQRPWGKWAAEIRDP++ RVWLGTF+T R RG+KAKLNF Sbjct: 59 EESMSKAFPEEAREKKRR------YRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNF 132
BLAST of CF838389 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15 Identity = 37/60 (61.67%), Postives = 39/60 (65.00%), Query Frame = 2 Query: 107 RKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 286 R YRG+RQRPWGKWAAEIRDP+K RVWLGTF T R RG KAKLNF Sbjct: 57 RPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNF 116
BLAST of CF838389 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.106e-14 Identity = 36/61 (59.02%), Postives = 40/61 (65.57%), Query Frame = 2 Query: 104 VRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 286 +RK YRG+RQRPWGKWAAEIRDP K RVWLGTF T + +G KAKLNF Sbjct: 87 LRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNF 147 The following BLAST results are available for this feature:
BLAST of CF838389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838389 ID=CF838389; Name=CF838389; organism=Citrus sinensis; type=EST; length=811bpback to top |