CF838393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 369.007 bits (946), Expect = 1.693e-101 Identity = 172/266 (64.66%), Postives = 191/266 (71.80%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE SQAGGA CP GLCCSKFG+CGNT YC +F+Q+LKHRND ACQGKGFY+Y+AFI AA+SF F RKREIAAF AQTSHETTGGW TAPDGPYAWGYC+ +EQG+PGDYC PS QWPCAPG+KYFGRGPIQIS+NYNYGP G+AI VDLL NPD VA DP ISFK+A WFWMTPQSPKPSCHDVI G+W+PSA D A RLPG+GV+TNIINGG+EC Sbjct: 23 AEQCGSQAGGARCPSGLCCSKFGWCGNTNDYC------GPGNCQSQCPGGPTPTPPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLEC 282
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 365.54 bits (937), Expect = 1.872e-100 Identity = 170/267 (63.67%), Postives = 191/267 (71.54%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKG-FYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE SQAGGA+C GLCCSKFG+CGNT YC +F+Q+L HRND ACQGK FY+Y+AF+ AA SF F RKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCF +EQG+PGDYC PS QWPCAPG+KYFGRGPIQIS+NYNYGP G+AI VDLL NPD VA DP ISFK+A WFWMTPQSPKPSCHDVITG+W+PS +D A R+PG+GV+TNIINGG+EC Sbjct: 22 AEQCGSQAGGALCASGLCCSKFGWCGNTNEYC-------------GPGNCQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLEC 275
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 365.155 bits (936), Expect = 2.445e-100 Identity = 170/266 (63.91%), Postives = 188/266 (70.68%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE QAGG VCPGG CCSKFG+CGNT YC R +F +LKHRN+ +C GKGFYTYDAFIAAAK+F F RKREIAAFLAQTSHETTGGW +APDGPYAWGYC+ +EQG+PG YC PS QWPCA G+KY+GRGPIQISYNYNYG AGKAI VDL+ NPD VA D ISFKTAFWFWMTPQSPKPSCH+VITG W PS +D AGRLPG+GV+TNIINGG+EC Sbjct: 20 AEQCGGQAGGRVCPGGACCSKFGWCGNTADYC------------------GSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVEC 267
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 365.155 bits (936), Expect = 2.445e-100 Identity = 170/266 (63.91%), Postives = 191/266 (71.80%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE SQAGGA C GLCCSKFG+CGNT YC +F+Q+LKHRND ACQGKGFY+Y+AFI AA+SF F RKREIAAF AQTSHETTGGW TAPDGPYAWGYC+ +EQG+PGDYC PS QWPCAPG+KYFGRGPIQIS+NYNYGP G+AI VDLL NPD VA DP ISFK+A WFWMTPQSPKPSCHDVI G+W+PS++D A RLPG+GV+TNIINGG+EC Sbjct: 23 AEQCGSQAGGARCASGLCCSKFGWCGNTNDYC-----------GPGNCQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLEC 277
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 4.171e-100 Identity = 171/267 (64.04%), Postives = 190/267 (71.16%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKG-FYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE QAGGA C GLCCS FG+CGNT YC +F+Q+LKHRND ACQGK FY+Y+AFI AA+SFG F RKREIAAF AQTSHETTGGWPTAPDGPYAWGYCF +EQG+PGDYC PS QWPCAPG+KYFGRGPIQIS+NYNYGP G+AI VDLL NPD VA DP ISFK+A WFWMTPQSPKPSCHDVI G+W+PSA+D A RLPG+GV+TNIINGG+EC Sbjct: 18 AEQCGKQAGGARCAAGLCCSNFGWCGNTNDYC---GPGKCQSQCPSGPSPKPPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLEC 281
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 360.533 bits (924), Expect = 6.023e-99 Identity = 169/267 (63.30%), Postives = 191/267 (71.54%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKG-FYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE SQAGGA+C GLCCSKFG+CGNT YC +F+Q+L HRND ACQGK FY+Y+AFI+AA SF F RKREIAAFLAQTSHETTGGWP+APDGPYAWGYCF +EQG+PGDYC PS QWPCAPG+KYFGRGPIQIS+NYNYGP G+AI VDLL NPD VA D ISFK+A WFWMTPQSPKPSCHDVITG+W+PS +D A R+PG+GV+TNIINGG+EC Sbjct: 18 AEQCGSQAGGALCAPGLCCSKFGWCGNTNDYC-------------GPGNCQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLEC 271
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 360.533 bits (924), Expect = 6.023e-99 Identity = 169/267 (63.30%), Postives = 190/267 (71.16%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKG-FYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE SQAGGA+C GLCCSKFG+CG+T YC +F+Q+L HRND ACQGKG FY+Y+AFI+AA SF F RKREIAAF AQTSHETTGGWPTAPDGPYAWGYCF +EQG+PGDYC PS QWPCAPG+KYFGRGPIQIS+NYNYGP G+AI VDLL NPD VA D ISFK+A WFWMTPQSPKPSCHDVITG+W+PS D A R+PG+GV+TNIINGG+EC Sbjct: 18 AEQCGSQAGGALCASGLCCSKFGWCGDTNDYC-------------GPGNCQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLEC 271
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 358.607 bits (919), Expect = 2.289e-98 Identity = 168/267 (62.92%), Postives = 190/267 (71.16%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKG-FYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE SQAGGA+C GLCCSKFG+CGNT YC +F+Q+L HRND ACQGKG FY+Y+AFI+AA SF F RKREIAAF AQTSHETTGGW +APDGPYAWGYCF +EQG+PGDYC PS QWPCAPG+KYFGRGPIQIS+NYNYGP G+AI VDLL NPD VA D ISFK+A WFWMTPQSPKPSCHDVITG+W+PS +D A R+PG+GV+TNIINGG+EC Sbjct: 18 AEQCGSQAGGALCASGLCCSKFGWCGNTNDYC---------------GPGNCQSQCPGGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLEC 269
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 357.836 bits (917), Expect = 3.904e-98 Identity = 164/266 (61.65%), Postives = 187/266 (70.30%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 A++ SQ GG C G CCSKFG+CGNT YC +F+Q+LKHRN+ +CQGK FY+Y+AFI AA+SF F RKREIAAF AQTSHETTGGW +APDGPYAWGYCF +E+GNPGDYC PS QWPCAPG+KYFGRGPIQIS+NYNYGP G+AI VDLL NPD VA DP ISFKTA WFWMTPQSPKPSCHDVI G+W PS++D A RLPG+GV+TNIINGG+EC Sbjct: 26 AQNCGSQGGGKACASGQCCSKFGWCGNTNDYC----------GSGNCQSQCPGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLEC 281
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 356.681 bits (914), Expect = 8.697e-98 Identity = 163/266 (61.28%), Postives = 185/266 (69.55%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE SQAGGA+CP LCCS +G+CG+T YC ++LFEQLL HRNDAAC +GFYTYDA + AA +F F RKRE+AAFL QTSHETTGGW TAPDGPY+WGYCFK+E G YC PS +WPCAP KKYFGRGPIQ+SYNYNYGPAG+AI DLL NP+ VA+DP +SFKTA WFWMTPQSPKPSCHDVITGQW PS+ D AGR+PGYGV+TNIINGG+EC Sbjct: 23 AEQCGSQAGGALCPNCLCCSSYGWCGSTSDYCGDGCQSQCDGCGGGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLEC 288 The following BLAST results are available for this feature:
BLAST of CF838393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838393 ID=CF838393; Name=CF838393; organism=Citrus sinensis; type=EST; length=800bpback to top |