CF838457

Overview
NameCF838457
Unique NameCF838457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length271
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF838457 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.793e-12
Identity = 48/94 (51.06%), Postives = 55/94 (58.51%), Query Frame = 3 
Query:   12 RSRANQLSS--SKDLPDLRRNANLSVPCTAXXXXXXXXXXXX-PTIPKAE---PQPPNN--PRMSTEFSEAFAFSGPAPERINWRLAMIGFVAA 269
            RSR NQ ++  S  +P LRRN +L V   A             PT P A    PQP     P+MST+FS+  AFSGPAPERIN RLAMIGFVAA
Sbjct:   20 RSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAA 113
The following BLAST results are available for this feature:
BLAST of CF838457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ELI_PEA1.793e-1251.06Early light-induced protein, chloroplastic OS=Pisu... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_06K07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06K07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838457 ID=CF838457; Name=CF838457; organism=Citrus sinensis; type=EST; length=271bp
CTGGTATAAGGAGATCCCGGGCAAACCAACTTTCCTCCTCCAAGGACTTG
CCTGATCTGCGTAGAAATGCCAACTTATCCGTGCCCTGCACGGCAGAGGA
TGAGCAGCAGCAACAGCAGAAAGATGATCAACCAACCATACCGAAAGCTG
AGCCTCAGCCACCAAATAATCCGCGGATGAGCACGGAGTTCTCTGAGGCG
TTCGCGTTCAGCGGGCCGGCACCGGAGAGGATAAACTGGAGGCTTGCGAT
GATTGGGTTCGTGGCTGCATT
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