CF838463

Overview
NameCF838463
Unique NameCF838463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838463 vs. ExPASy Swiss-Prot
Match: C94A1_VICSA (Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.397e-45
Identity = 95/225 (42.22%), Postives = 145/225 (64.44%), Query Frame = 3
Query:  135 SYLTFSWLKDFNNLCDWYTHLLAKSPTGTIHLHA-LGNT--VTSNPENVEYILKTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQRKIASVELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQ 800
            SYL+F   K+ +    W + ++  SP+ T  L   LG    +T NP  V++ILK +F NY KG  F+  L D LG GIFN +G +WKFQR++AS E  + + + +   +V  E+  RLIP+L+S+  + NNILD QD+ +RF+FD+IC  +FG DPE L  +   SKFA A++ A+++S++R   P PI+WKIK+  NIGSEK+LK A+  V   A+ ++ ++++
Sbjct:   56 SYLSFR--KNLHRRIQWLSDIVQISPSATFQLDGTLGKRQIITGNPSTVQHILKNQFSNYQKGTTFTNTLSDFLGTGIFNTNGPNWKFQRQVASHEFNTKSIRNFVEHIVDTELTNRLIPILTSST-QTNNILDFQDILQRFTFDNICNIAFGYDPEYLTPSTNRSKFAEAYEDATEISSKRFRLPLPIIWKIKKYFNIGSEKRLKEAVTEVRSFAKKLVREKKR 277          
BLAST of CF838463 vs. ExPASy Swiss-Prot
Match: C94A2_VICSA (Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.899e-42
Identity = 93/221 (42.08%), Postives = 133/221 (60.18%), Query Frame = 3
Query:  147 FSWLKDFNNLCDWYTHLLAKSPTGTIHLH---ALGNTVTSNPENVEYILKTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQRKIASVELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQ 800
            FS L +F+    W + +L   P+ T  LH         T+ P  V++IL+T F  Y KG  F   + D LG GIFN DG SWKFQR+I+S E  + + + +   +V  E+  RL+P+LS A+N     LD QD+ +R +FD+IC  +FG DPE L+ +LP   FA AFD +S+LS ER  A  P++WK+KR LNIG E+QLK A+  V  LA  ++  +++
Sbjct:   53 FSLLANFHRRIQWTSDILQTIPSSTFVLHRPFGARQVFTAQPAVVQHILRTNFTCYGKGLTFYQSINDFLGDGIFNADGESWKFQRQISSHEFNTRSLRKFVETVVDVELSDRLVPVLSQASNS-QTTLDFQDILQRLTFDNICMIAFGYDPEYLLPSLPEIPFAKAFDESSQLSIERLNALIPLLWKVKRFLNIGVERQLKEAVAEVRGLATKIVKNKKK 272          
BLAST of CF838463 vs. ExPASy Swiss-Prot
Match: C86A1_ARATH (Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 8.545e-35
Identity = 83/195 (42.56%), Postives = 120/195 (61.54%), Query Frame = 3
Query:  246 TVTSNPENVEYILKTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQRKIASVELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLL 830
            TVT +P+NVE+ILKTRFDNYPKG  +     DLLG GIFN DG++W  QRK A++E  +   +      V   I+ RL  +L  A    N  +DLQD+F R +FD+IC  +FG DPE L L+LP + F+ AFD A++ + +R L  +  +W+I++ + IGSE +LK ++++V       I  R+    S  +DLL
Sbjct:   85 TVTCHPKNVEHILKTRFDNYPKGPMWRAAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNGTIKNRLWLILDRAVQN-NKPVDLQDLFLRLTFDNICGLTFGKDPETLSLDLPDNPFSVAFDTATEATLKRLLY-TGFLWRIQKAMGIGSEDKLKKSLEVVETYMNDAIDARKN---SPSDDLL 274          
BLAST of CF838463 vs. ExPASy Swiss-Prot
Match: C86A2_ARATH (Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CYP86A2 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.590e-33
Identity = 76/202 (37.62%), Postives = 118/202 (58.42%), Query Frame = 3
Query:  246 TVTSNPENVEYILKTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQRKIASVELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQ-------MGFSKKNDLL 830
            TVT +P+N+E++LKTRFDNYPKG  +  +  D LG GIFN DG++W FQRK A++E  +   +      V   I+ R  P+L +A N    + DLQD+  R +FD+IC  +FG D       LP + FA+AFD A++ S +R + P   +W++K+ L +G E  L  ++  ++   + +I+ R+Q        G  + +DLL
Sbjct:   82 TVTCDPKNIEHMLKTRFDNYPKGPTWQAVFHDFLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMGRWVNRGIKLRFCPILETAQNNYEPV-DLQDLILRLTFDNICGLAFGKDTRTCAPGLPENGFASAFDRATEASLQRFILPE-FLWRLKKWLGLGLEVSLSRSLGEIDGYLDAVINTRKQELLSQRESGVQRHDDLL 281          
BLAST of CF838463 vs. ExPASy Swiss-Prot
Match: C04C1_PINTA (Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.573e-31
Identity = 87/225 (38.67%), Postives = 127/225 (56.44%), Query Frame = 3
Query:  162 DFNNLCDWYTHLLAKSPTGTIHLHALGNTVTSNPENVEYILKTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQRKIASVELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNL----PVSKFATAFDLASKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKND 824
            +F  L D++T    +  T  +         T++P NVE+ILKT F NY KG     I+ DLLG GIFNVDG+ W+ QRK+AS E  S   K ++   V      +L  +L+ AA K+N  +++QD+F R S DSICK  FG+D   L  +     P + FA AFD+A+ +   R +  S   WK++R  N+GSE  L+  IK+V++    +IH R+Q  FS + +
Sbjct:   49 NFERLHDYHTDQAQRYKTFRVVYPTCSYVFTTDPVNVEHILKTNFANYDKGTFNYDIMKDLLGDGIFNVDGDKWRQQRKLASSEFASKVLKDFS-SGVFCNNAAKLANILAQAA-KLNLSVEMQDLFMRSSLDSICKVVFGIDINSLSSSKAESGPEASFAKAFDVANAMVFHRHMVGS--FWKVQRFFNVGSEAILRDNIKMVDDFLYKVIHFRRQEMFSAEKE 269          
The following BLAST results are available for this feature:
BLAST of CF838463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
C94A1_VICSA2.397e-4542.22Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE... [more]
C94A2_VICSA1.899e-4242.08Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE... [more]
C86A1_ARATH8.545e-3542.56Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CY... [more]
C86A2_ARATH3.590e-3337.62Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CY... [more]
C04C1_PINTA2.573e-3138.67Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_06K13_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838463 ID=CF838463; Name=CF838463; organism=Citrus sinensis; type=EST; length=832bp
AGGCCTTGTGGTTGCAATCTTTCGGCGACACTTTAAGCTTCATGTTCTTC
ACTTTCACAATTTTGTTTTCTTTGTTTTCTTTGTTGATCTTTGTGCTGAG
GCTGAAACCCTGGTGCCAATGTGATGTTTGCCGGAGCTATCTCACATTCA
GTTGGTTAAAAGATTTCAATAATCTTTGCGATTGGTACACTCATCTTCTT
GCAAAATCACCGACTGGGACAATTCATCTTCACGCTCTTGGCAACACCGT
CACATCCAATCCTGAAAACGTTGAGTACATTCTCAAAACAAGATTCGATA
ATTACCCAAAAGGGAAGCCCTTCTCAGTAATCTTGGGTGATCTTTTGGGT
GGAGGTATTTTCAACGTTGATGGCAATTCTTGGAAGTTTCAAAGGAAAAT
AGCAAGTGTCGAGCTTGGTAGTTTTAACTTTAAAATGTATGCTTTCGAGC
TTGTGACGGCTGAGATTCGTTTCAGGCTCATTCCTCTCTTATCATCAGCA
GCTAATAAAGTCAACAATATCTTAGATCTACAAGATGTGTTTCGTCGATT
TTCATTTGATAGTATTTGCAAATTCTCCTTCGGTTTAGACCCCGAGTGCC
TCATGTTAAATCTGCCAGTTTCAAAATTTGCGACAGCATTTGATCTTGCA
TCAAAACTGTCAGCAGAACGAGCACTGGCGCCGTCGCCAATTGTATGGAA
GATCAAGCGGCTATTGAATATAGGCTCCGAGAAGCAGCTCAAAGGAGCAA
TAAAGCTGGTGAATGAACTAGCTGAGACGATGATACATCAACGGCAGCAA
ATGGGTTTCTCCAAGAAGAACGATCTGTTATC
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