CF838469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838469 vs. ExPASy Swiss-Prot
Match: TMM18_RAT (Transmembrane protein 18 OS=Rattus norvegicus GN=Tmem18 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = 2 Query: 251 DWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFATQNYFDPHGVFLSALWSGPLLFIAIIILVNTLFSLCSLIVRWKKAELRHRARISRNKED 607 DW EPWL+GL+AFH + L++ S + Q+ FL + VY AE +N V NW+ FA YFD G+F+S ++S PLLF A++I++ + +++ K + R + R R KE+ Sbjct: 22 DWTEPWLLGLLAFHLLCLLLTCFSAQRYKLQIGHFLCLVVLVYCAEYINEVAAMNWRLFAKYQYFDSRGMFISLVFSAPLLFNAMVIVIMWVRKTLTVMSDLKNLQERRKERKRRRKEE 140
BLAST of CF838469 vs. ExPASy Swiss-Prot
Match: TMM18_HUMAN (Transmembrane protein 18 OS=Homo sapiens GN=TMEM18 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.983e-17 Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 2 Query: 251 DWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFATQNYFDPHGVFLSALWSGPLLFIAIIILVNTLFSLCSLIVRWKKAELRHRARISRNKED 607 DW EPWLMGL FH + +++ S ++ Q+ FL + VY AE +N NW+ F+ YFD G+F+S ++S PLL A+II+V ++ +++ K A+ R + + R KED Sbjct: 22 DWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFSKYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQERRKEKKRRRKED 140
BLAST of CF838469 vs. ExPASy Swiss-Prot
Match: TMM18_MOUSE (Transmembrane protein 18 OS=Mus musculus GN=Tmem18 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.590e-17 Identity = 43/119 (36.13%), Postives = 69/119 (57.98%), Query Frame = 2 Query: 251 DWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFATQNYFDPHGVFLSALWSGPLLFIAIIILVNTLFSLCSLIVRWKKAELRHRARISRNKED 607 DW EPWL+GL+AFH + L++ S + Q+ FL + VY AE +N V NW+ F+ YFD G+F+S ++S PLLF A++I++ + +++ K + + R R KE+ Sbjct: 22 DWTEPWLLGLLAFHLLCLLLTCFSSQRYKLQIGHFLCLVVLVYSAEYINEVAAVNWRLFSKYQYFDSRGMFISLVFSAPLLFNAMLIVIMWVRKTLTVMTDLKTLQEERKERRRRRKEE 140
BLAST of CF838469 vs. ExPASy Swiss-Prot
Match: TMM18_DANRE (Transmembrane protein 18 OS=Danio rerio GN=tmem18 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.590e-17 Identity = 45/123 (36.59%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 236 FFHAIDWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFATQNYFDPHGVFLSALWSGPLLFIAIIILVNTLFSLCSLIVRWKKAELRHRARISRNKE 604 F ++DW EPWLM L+AFH + S K Q+ FLL +A VY AE LN + NW+ F+ YFD G+F+S ++S PLL +II+ ++ S + K +L+ +A +K+ Sbjct: 28 FLQSVDWSEPWLMALLAFHVFCFAFTLLSCKYYRIQICHFLLMVAMVYSAEYLNELAAMNWRSFSKFQYFDSKGMFISLVYSVPLLLNTVIIVAVWVWRTFSTMTELKILQLKRKAARENHKK 150
BLAST of CF838469 vs. ExPASy Swiss-Prot
Match: TMM18_XENTR (Transmembrane protein 18 OS=Xenopus tropicalis GN=tmem18 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.193e-16 Identity = 46/121 (38.02%), Postives = 70/121 (57.85%), Query Frame = 2 Query: 248 IDWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFATQNYFDPHGVFLSALWSGPLLFIAIIILVNTLF-SLCSLIVRWKKAELRHRARISRNKED 607 IDWKEPWL+GL FH + L+V S K+ Q+ FLL + V AE +N +W+ ++ Q YFD G+F+S +S PLL III+V+ ++ +LC + + R +R R K++ Sbjct: 16 IDWKEPWLIGLAVFHILCLIVTYVSFKSYPLQICHFLLMVVLVSCAEYINEFAAMHWRSYSKQQYFDSSGMFISLAFSAPLLCNTIIIVVHWVYKTLCVMTELKTLQQKRKESREKRKKKE 136
BLAST of CF838469 vs. ExPASy Swiss-Prot
Match: TMM18_CHICK (Transmembrane protein 18 OS=Gallus gallus GN=TMEM18 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.379e-16 Identity = 41/117 (35.04%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 251 DWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFATQNYFDPHGVFLSALWSGPLLFIAIIILVNTLFSLCSLIVRWKKAELRHRARISRNK 601 DW EPWL+GL FH + ++ S ++ Q+ FL + VY AE +N + NW+ F+ YFD G+F+S ++S PLL III+VN ++ +++ K + R +A + K Sbjct: 26 DWAEPWLLGLAGFHVLCFLLTCFSFQHYRVQIGHFLCMVCLVYCAEYINELAAMNWRLFSKYQYFDSRGMFISLVFSAPLLVNTIIIVVNWVYRTLNVMTELKTLQQRIKAEKDKKK 142
BLAST of CF838469 vs. ExPASy Swiss-Prot
Match: TMM18_XENLA (Transmembrane protein 18 OS=Xenopus laevis GN=tmem18 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.088e-15 Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 2 Query: 248 IDWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFATQNYFDPHGVFLSALWSGPLLFIAIIILVNTLF-SLCSLIVRWKKAELRHRARISRNKED 607 IDW EPWL+GL AFH + +V S K+ Q+ FLL + V AE +N +W+ ++ Q YFD G+F+S +S PLL III+V+ ++ +LC + + R +R R K++ Sbjct: 16 IDWTEPWLIGLAAFHILCFIVTYISFKSYPLQICHFLLMVVLVSCAEYINEFAAMHWRAYSKQQYFDSSGMFISLAFSAPLLCNTIIIVVHWVYKTLCVMTELKTLQQKRKESREKRKKKE 136
BLAST of CF838469 vs. ExPASy Swiss-Prot
Match: TMM18_BOVIN (Transmembrane protein 18 OS=Bos taurus GN=TMEM18 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.421e-15 Identity = 46/120 (38.33%), Postives = 69/120 (57.50%), Query Frame = 2 Query: 251 DWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFATQNYFDPHGVFLSALWSGPLLFIAIIILVNTLFSLCSLIVRWKKAELRHRARI-SRNKED 607 DW EPWL+GL FH + L++ S + Q+ FL + VY AE +N V NW+ F+ YFD G+F+S ++S PLL A++I+V L+ +L+V LR + R +R KE+ Sbjct: 22 DWTEPWLVGLAGFHVLCLLLTCFSSQRYRLQVGHFLCLVTLVYCAEYINEVAAMNWRLFSKHQYFDSRGMFISLVFSAPLLLNALVIVV--LWVRKTLVVMTDLRSLREQRRARARPKEE 139 The following BLAST results are available for this feature:
BLAST of CF838469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838469 ID=CF838469; Name=CF838469; organism=Citrus sinensis; type=EST; length=801bpback to top |