CF838476

Overview
NameCF838476
Unique NameCF838476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838476 vs. ExPASy Swiss-Prot
Match: ANGLT_ROSHC (Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hybrid cultivar GN=RhGT1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31
Identity = 81/201 (40.30%), Postives = 114/201 (56.72%), Query Frame = 3
Query:  273 DTIVLYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVTSAGT----------DDYIASVSATAPSVTFHQLPPPVSRIPDTLRSPADFPALVYELGELNNPNLHETLITISKRSNLKAFVIDFLCNPAFQVSSSTLSIPTYYYFTTAGSVLAANLYLPTLHKNTTKSFRELGSALLNFPGFPPFPARDMALPMHD 845
            D IVLY  PG GHL SMVELGKL+LT+HP FSI I+  TAP   +A             +YI +VSA  P++ FH L P +S +P+ +        L +E   L  PN+ + L T+  +S+LKA ++D  C+  F V+   L+IPT+Y++T+AG  LA  L +PT H+ TT S  + G   ++  G PP P   M   + D
Sbjct:    4 DAIVLYPYPGLGHLISMVELGKLLLTHHPSFSITILASTAPTTIAATAKLVASSNDQLTNYIKAVSADNPAINFHHL-PTISSLPEHIEK----LNLPFEYARLQIPNILQVLQTL--KSSLKALILDMFCDALFDVTKD-LNIPTFYFYTSAGRSLAVLLNIPTFHR-TTNSLSDFGDVPISISGMPPIPVSAMPKLLFD 195          
The following BLAST results are available for this feature:
BLAST of CF838476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ANGLT_ROSHC3.429e-3140.30Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hy... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_06L03_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06L03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838476 ID=CF838476; Name=CF838476; organism=Citrus sinensis; type=EST; length=846bp
GTTTTCCCAAAATCCTCCTCCACTTGTGAAAGTATCTTTAAGCTCCCTTT
ACTTCAACCAAATTCTCTCAACCAACAATTCTTTGCCCTTTTAAACCTGT
AGCCTACAAGCTTCCACTTTTTCGTCGTGGGTGTCGATGCATAAAAGTGT
ATTGCGGTTTGCAAACACAGAGGAGCCCTTTATCACTCTCATTCTCTTTC
ACTGTAATCTCTCACCATTTCTACTGTTTTTTTTATTTTAACTTGTAAAA
TTAAAGATTAAAAAAAATGAAAGATACGATTGTCCTTTATACTTCTCCAG
GAAGAGGTCACTTAAATTCCATGGTAGAATTAGGAAAATTGATACTCACG
TACCACCCTTGCTTCTCCATCGACATCATAATCCCCACCGCCCCGTTCGT
AACAAGCGCCGGTACCGATGATTACATCGCCTCCGTCTCCGCCACAGCTC
CCTCCGTTACCTTCCACCAGCTCCCTCCTCCGGTTTCCCGCATACCCGAC
ACTTTACGTTCACCAGCTGACTTCCCAGCCTTAGTGTACGAGCTTGGCGA
GCTCAACAACCCTAATCTCCACGAAACCCTAATAACAATTTCCAAACGCT
CAAACCTGAAAGCCTTTGTTATCGATTTCCTTTGCAACCCCGCGTTTCAA
GTTTCCTCGAGTACTCTCAGTATCCCTACTTACTATTACTTCACCACCGC
AGGAAGCGTACTCGCTGCTAACCTCTACTTACCAACTCTTCATAAAAACA
CCACAAAGAGCTTCAGAGAACTCGGCAGCGCGCTTTTAAATTTCCCCGGA
TTTCCGCCTTTTCCAGCAAGAGACATGGCGTTACCCATGCATGATC
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