CF838516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_NOSP7 (Isoleucyl-tRNA synthetase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ileS PE=3 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 6.312e-81 Identity = 153/285 (53.68%), Postives = 188/285 (65.96%), Query Frame = 2 Query: 2 AVFRMVSAPPSTSGLLNEFLPDLGLXXXXXXXXXXXXXXXXXXXXKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 A F + S + LL E+ DLG+ L YAVVE+ S + A K + ++IVA+DLV L + G +L +K T G+DLE+ Y HP+ +R+ P+V+GGDYITTESGTGLVHTAPGHGQEDY+ +YGLPIL+PVDD G FT+EAG+F+GL+VLGDGN AV+ L SL+ EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A+ AI VKW+P Q NRI+ M + RSDWCI RQR+WGVPI Sbjct: 216 AAFPVTSLAEAVKPLLAEYQSDLGVAIWTTTPWTIPGNLAVAVNADLNYAVVEV-------SQSEAQSKFK-----------YLIVAADLVERLSSTLGLELTLKATFKGNDLEHTTYRHPLFDRESPIVVGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDDNGNFTQEAGEFAGLNVLGDGNQAVIDALAAAGSLLKEEPYPHKYPYDWRTKKPTIFRATEQWFASVEGFREEALKAIATVKWIPAQGENRITPMVAERSDWCISRQRSWGVPI 482
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_ANASP (Isoleucyl-tRNA synthetase OS=Anabaena sp. (strain PCC 7120) GN=ileS PE=3 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 2.399e-80 Identity = 154/285 (54.04%), Postives = 187/285 (65.61%), Query Frame = 2 Query: 2 AVFRMVSAPPSTSGLLNEFLPDLGLXXXXXXXXXXXXXXXXXXXXKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 A F + S + LL E+LPDLG+ L Y++VE+ SR G + K ++IVA+DLV L A +L +K T G +LE+ Y HP+ +R+ PVV+GGDYITTESGTGLVHTAPGHGQEDYV L+YGLPIL+PVDD G FT+EAG+F+GL+VLG+GN AV+ L SL+ EE Y HKYPYDWRTKKPTIFRATEQWFASVEGFR A+ AI VKW+P Q NRI+ M + RSDWCI RQR+WGVPI Sbjct: 216 AAFPVTSFAEAAKPLLGEYLPDLGVAIWTTTPWTIPGNLAVAVNGDLNYSLVEV---------------SRIGAETQSNFK-YLIVAADLVERLAATISAQLTVKATFKGKELEHTTYRHPLFDRESPVVVGGDYITTESGTGLVHTAPGHGQEDYVVGLRYGLPILAPVDDNGDFTQEAGQFAGLNVLGEGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKPTIFRATEQWFASVEGFRDEALKAIAAVKWIPAQGENRITPMVAERSDWCISRQRSWGVPI 484
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_CYAP7 (Isoleucyl-tRNA synthetase OS=Cyanothece sp. (strain PCC 7424) GN=ileS PE=3 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 3.133e-80 Identity = 150/285 (52.63%), Postives = 187/285 (65.61%), Query Frame = 2 Query: 2 AVFRMVSAPPSTSGLLNEFLPDLGLXXXXXXXXXXXXXXXXXXXXKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 AVF + A + +L +L DLG+ L YAVVE S P K + IVA+DLV L A + T L +K TL G DLE+ Y HP+ +R+ ++IGGDY+TTESGTGLVHTAPGHGQEDY+ +YGLP+LSPVD++G FT EAG+F+GL+VL D N A++K L+E+ +L+ EEPY+HKYPYDWRTKKPTIFRATEQWFASVEGFR A++AI V W+PPQ NRI+ M + RSDWCI RQR+WGVPI Sbjct: 216 AVFPITKASDTAKKVLTPYLKDLGVAIWTTTPWTLPGNLAVALNPDLTYAVVE--------SGKPVCKHQ------------YFIVAADLVDKLSATFETPLTVKATLKGEDLEHTTYRHPLFDRESEILIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPVLSPVDEKGNFTSEAGQFAGLNVLKDANEAIIKELEEKGALLKEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDTALEAIKNVTWIPPQGENRITPMVADRSDWCISRQRSWGVPI 480
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_CYAP8 (Isoleucyl-tRNA synthetase OS=Cyanothece sp. (strain PCC 8801) GN=ileS PE=3 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 4.524e-79 Identity = 151/285 (52.98%), Postives = 187/285 (65.61%), Query Frame = 2 Query: 2 AVFRMVSAPPSTSGLLNEFLPDLGLXXXXXXXXXXXXXXXXXXXXKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 A F ++ + +L+ FL +LG+ +L YA+VE S N+ Q +IIVA+DLV L A + T+L +K TL G LE+ Y HP+ +R+ +VIGGDY+TTESGTGLVHTAPGHGQEDY+ +YGL +LSPVDD G FTEEAG+FSGL+VL D N A++ L + SL+ EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR+AA++AI V W+PPQ NRI+ M S RSDWCI RQR+WGVPI Sbjct: 216 AAFPIIKSSKDAQEILDPFLSNLGVAIWTTTPWTLPGNLAVALNPELTYAIVEQTS-----------------NLCNYQ---YIIVAADLVERLSATFSTELTVKATLPGQILEHTIYRHPLYDRESEIVIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLQVLSPVDDAGNFTEEAGQFSGLNVLKDANQAIINELKNKGSLLKEEPYLHKYPYDWRTKKPTIFRATEQWFASVEGFREAALEAIKSVNWIPPQGENRITPMVSDRSDWCISRQRSWGVPI 480
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_SYNY3 (Isoleucyl-tRNA synthetase OS=Synechocystis sp. (strain PCC 6803) GN=ileS PE=3 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.232e-76 Identity = 148/283 (52.30%), Postives = 176/283 (62.19%), Query Frame = 2 Query: 8 FRMVSAPPSTSGLLNEFLPDLGLXXXXXXXXXXXXXXXXXXXXKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 F + A + +L ++ DL + +L YAVVE +S + S ++IVA DLV L +G KL +K TL G LEN Y HP+ +R P+VIGGDY+TTESGTGLVHTAPGHGQEDYV +YGLPILSPVD G TEEAGKF+GL+VL D N A++ L +Q L+ EE YEHKYPYDWRTKKPTIFRATEQWFASVEGFR A+ AI +V W+P Q NRI+ M RSDWCI RQR WGVPI Sbjct: 218 FPITQAGEKAAEILAPYIDDLAVAIWTTTPWTLPGNLAVALNPELTYAVVETESHIFHRS--------------------YLIVALDLVEKLSETFGVKLTVKVTLQGESLENTCYQHPLFDRVSPIVIGGDYVTTESGTGLVHTAPGHGQEDYVVGQRYGLPILSPVDAAGNLTEEAGKFAGLNVLNDANEAIINALQDQKVLLKEEAYEHKYPYDWRTKKPTIFRATEQWFASVEGFRDQALKAIKEVTWIPTQGENRITPMVGDRSDWCISRQRAWGVPI 480
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_MICAN (Isoleucyl-tRNA synthetase OS=Microcystis aeruginosa (strain NIES-843) GN=ileS PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.153e-74 Identity = 128/212 (60.38%), Postives = 167/212 (78.77%), Query Frame = 2 Query: 221 NVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 +V++ + ++IVA+DLV L + L IK T+ G +LE+ +Y HP+ +R+ ++IGGDY+TT+SGTGLVHTAPGHGQEDY+ +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++ L E+ +L+ EE Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI V+W+P NRI++M S RSDWCI RQR+WGVPI Sbjct: 262 SVVETSESNYLIVATDLVEKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_CYAP4 (Isoleucyl-tRNA synthetase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ileS PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 4.381e-74 Identity = 146/283 (51.59%), Postives = 180/283 (63.60%), Query Frame = 2 Query: 8 FRMVSAPPSTSGLLNEFLPDLGLXXXXXXXXXXXXXXXXXXXXKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 F + S + +L ++LP+L + L YAVVE KD +++VA++LV LE G L IK T+AG LE+ Y HP+ +RQ P+V+G DY+TT+SGTGLVHTAPGHGQEDYV YGLPILSPVD G+FTEEAG+F+GL VL +GN AV++ L + +L+ EE Y HKYPYDWRTKKP I RATEQWFASVEGFR+AA+ AI QV+W+P Q NRI+AM S RSDWCI RQR WGVPI Sbjct: 218 FALTSLSATAEAVLKDYLPNLKVAIWTTTPWTIPGNLAVALNPDLTYAVVE-----------------------KDGS--YLLVANELVERLETTLGVSLPIKTTIAGQALEHSTYQHPLFDRQGPLVMG-DYVTTDSGTGLVHTAPGHGQEDYVVGQHYGLPILSPVDGNGRFTEEAGQFAGLKVLDEGNEAVIQALQQVGALLKEEAYSHKYPYDWRTKKPVILRATEQWFASVEGFREAALQAIAQVQWIPAQGENRITAMVSERSDWCISRQRNWGVPI 474
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_CYAA5 (Isoleucyl-tRNA synthetase OS=Cyanothece sp. (strain ATCC 51142) GN=ileS PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.665e-73 Identity = 145/285 (50.88%), Postives = 181/285 (63.51%), Query Frame = 2 Query: 2 AVFRMVSAPPSTSGLLNEFLPDLGLXXXXXXXXXXXXXXXXXXXXKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 A F ++ A T +L FL LG+ L YAVVE S +V Q ++IVA+DLV L + T+L +K TL G LE+ Y HP+ +R+ ++IGGDY+TTESGTGLVHTAPGHGQEDY+ +YGL ILSPVD +G FTEEA +F+GL+VL D N ++ L E+ SL+ EE Y+HKYPYDWRTKKPTIFRATEQWFASV+GFR AA+ AI V+W+P Q NRI+ M S RSDWCI RQR+WG+PI Sbjct: 216 AAFPIIKASKDTEEILQPFLNKLGVAIWTTTPWTLPGNLAVALNPDLNYAVVEQNS-----------------DVCNYQ---YLIVAADLVERLSTTFETELTVKATLPGKALEHTIYRHPLYDRESEILIGGDYVTTESGTGLVHTAPGHGQEDYMVGQRYGLGILSPVDAKGNFTEEARQFAGLNVLKDANEVIINELKEKGSLLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVKGFRDAALTAIKTVQWIPAQGENRITPMVSDRSDWCISRQRSWGLPI 480
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_THEEB (Isoleucyl-tRNA synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=ileS PE=3 SV=2) HSP 1 Score: 275.789 bits (704), Expect = 2.174e-73 Identity = 132/202 (65.35%), Postives = 155/202 (76.73%), Query Frame = 2 Query: 251 IIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 +IVA DLV L G L + T G+DLE+ RY HP+ R+ ++IGGDY+TTESGTGLVHTAPGHG EDY +YGLPILSPVD+ G FT EAG F+GL+VL +GN AV+ L E +L+ EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR AA+ AI +VKW+P Q NRI+AM + RSDWCI RQR+WGVPI Sbjct: 279 LIVAKDLVERLSDTLGRTLKVVATAKGADLEHSRYRHPLFEREGKILIGGDYVTTESGTGLVHTAPGHGLEDYGVGQRYGLPILSPVDENGCFTAEAGPFAGLNVLQEGNAAVIAALQECGALLKEEPYVHKYPYDWRTKKPTIFRATEQWFASVEGFRDAALRAIAEVKWIPAQGENRITAMVAERSDWCISRQRSWGVPI 480
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_SYNP6 (Isoleucyl-tRNA synthetase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ileS PE=3 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.488e-69 Identity = 123/203 (60.59%), Postives = 154/203 (75.86%), Query Frame = 2 Query: 251 IIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 +IVA++L +L + T+L + T GS LE+ RY HP+ +R+ PVVIGGDYITTESGTGLVHTAPGHGQ+D++ +YGL + PVDD+G FT G + G +VL D N AV+++L E +L+ EE Y H+YPYDWRTKKPTIFRATEQWFASVEGFR+ A+ AI +V W+P Q NRI++M S RSDWCI RQRTWGVPI Sbjct: 273 LIVAAELAESLSKTFATELTVLATFPGSVLEHSRYRHPLYDRESPVVIGGDYITTESGTGLVHTAPGHGQDDFIVGNRYGLEVFCPVDDKGDFTAAVGDRLVGKNVLKDANAAVIEWLTEVGALLKEESYAHRYPYDWRTKKPTIFRATEQWFASVEGFREQALQAIAEVDWIPAQGENRITSMVSERSDWCISRQRTWGVPI 475 The following BLAST results are available for this feature:
BLAST of CF838516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838516 ID=CF838516; Name=CF838516; organism=Citrus sinensis; type=EST; length=858bpback to top |