CF838518

Overview
NameCF838518
Unique NameCF838518
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838518 vs. ExPASy Swiss-Prot
Match: GUN1_PERAE (Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 7.217e-97
Identity = 168/213 (78.87%), Postives = 184/213 (86.38%), Query Frame = 3
Query:  153 YSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVXXXXXXXXXXXSVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELL 791
            YSDAL KSILFFEGQRSG+LP NQ+LTWRG+SGLSDGSSYHVDLVGGYYDAGDN+KFGLPMAFTTT+L+W +IEFG  M   +ENA+AA+RW TDYLLKASTAT  +LYVQVG+PN DH CWERPEDMDTPRNVYKVSTQNPGSDV           S+VF DSD SYSTKLL TA+KVF+FAD+YRGSYSDSL SVVCPFYCSYSGY DELL
Sbjct:   30 YSDALEKSILFFEGQRSGKLPTNQRLTWRGDSGLSDGSSYHVDLVGGYYDAGDNLKFGLPMAFTTTMLAWGIIEFGCLMPEQVENARAALRWSTDYLLKASTATSNSLYVQVGEPNADHRCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASIVFGDSDSSYSTKLLHTAVKVFEFADQYRGSYSDSLGSVVCPFYCSYSGYNDELL 242          
BLAST of CF838518 vs. ExPASy Swiss-Prot
Match: GUN19_ORYSJ (Endoglucanase 19 OS=Oryza sativa subsp. japonica GN=Os08g0114200 PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 5.184e-87
Identity = 147/214 (68.69%), Postives = 176/214 (82.24%), Query Frame = 3
Query:  150 DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVXXXXXXXXXXXSVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELL 791
            +Y+DAL KSI+FFEGQRSG+LPP  ++ WR +SGL+DG+ Y+VDLVGGYYDAGDNVKFGLPMAF+TT+L+WSV++FG  M   L NA+AA+RWG DYLLKA+TATPGALYVQV DPN DH CWERPEDMDTPR+VY+V+   PGSDV           S+VF+ +DP+YS +LL  A +VFDFAD++RGSYSDSL S VCPFYCSYSGY DELL
Sbjct:   54 NYADALAKSIIFFEGQRSGKLPPGNRMPWRADSGLTDGAQYNVDLVGGYYDAGDNVKFGLPMAFSTTMLAWSVLDFGKFMGAELPNARAAVRWGADYLLKAATATPGALYVQVADPNQDHRCWERPEDMDTPRSVYRVTADKPGSDVAGETAAALAASSMVFRRADPAYSARLLHAATQVFDFADRHRGSYSDSLASSVCPFYCSYSGYHDELL 267          
BLAST of CF838518 vs. ExPASy Swiss-Prot
Match: GUN1_ARATH (Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 1.081e-84
Identity = 149/214 (69.63%), Postives = 170/214 (79.44%), Query Frame = 3
Query:  150 DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVXXXXXXXXXXXSVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELL 791
            +Y DAL KSILFFEGQRSG+LPPNQ++TWR NSGLSDGS+ +VDLVGGYYDAGDN+KFG PMAFTTT+LSWS+IEFG  M++ L NAK AIRW TD+LLKA T+ P  +YVQVGDPNMDH CWERPEDMDTPR+V+KV   NPGSD+           S+VF+  DPSYS  LL+ A+ VF FADKYRG YS  L   VCPFYCSYSGY DELL
Sbjct:   43 NYKDALSKSILFFEGQRSGKLPPNQRMTWRSNSGLSDGSALNVDLVGGYYDAGDNMKFGFPMAFTTTMLSWSLIEFGGLMKSELPNAKDAIRWATDFLLKA-TSHPDTIYVQVGDPNMDHACWERPEDMDTPRSVFKVDKNNPGSDIAGEIAAALAAASIVFRKCDPSYSNHLLQRAITVFTFADKYRGPYSAGLAPEVCPFYCSYSGYQDELL 255          
BLAST of CF838518 vs. ExPASy Swiss-Prot
Match: GUN4_ORYSJ (Endoglucanase 4 OS=Oryza sativa subsp. japonica GN=GLU14 PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 1.012e-82
Identity = 153/230 (66.52%), Postives = 173/230 (75.22%), Query Frame = 3
Query:  150 DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNH----------------LENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVXXXXXXXXXXXSVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELL 791
            +Y+DAL K+ILFFE QRSG+LPP Q++ WR +SGLSDGS+  VDL GGYYDAGDNVKFGLPMAFT T+LSWSVIEFG  M                   L+NA+AA+RWG DYLLKA+TATP  LYVQV DP  DH CWERPEDMDTPR+VYKV+ Q+PGSDV           S+VF+ SDPSYS KLL  A  VFDFADKYRGSYSDSL+SVVCPFYCS+S Y DELL
Sbjct:   24 NYADALDKAILFFEAQRSGKLPPGQRVAWRADSGLSDGSADGVDLAGGYYDAGDNVKFGLPMAFTVTMLSWSVIEFGDMMPARRSSFLGGIFGGGGVAQLDNARAAVRWGADYLLKAATATPDTLYVQVADPYQDHRCWERPEDMDTPRSVYKVTPQSPGSDVAGETAAALAAASIVFRVSDPSYSAKLLDAAQLVFDFADKYRGSYSDSLSSVVCPFYCSHS-YHDELL 252          
BLAST of CF838518 vs. ExPASy Swiss-Prot
Match: GUN3_ARATH (Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE=2 SV=2)

HSP 1 Score: 304.679 bits (779), Expect = 3.844e-82
Identity = 145/214 (67.76%), Postives = 165/214 (77.10%), Query Frame = 3
Query:  150 DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVXXXXXXXXXXXSVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELL 791
            +Y +AL KS+LFF+GQRSGRLP +QQL+WR +SGLSDGSS HVDL GGYYDAGDNVKF  PMAFTTT+LSWS +E+G  M   L+N++ AIRW TDYLLK + ATPG LYV VGDPN DH CWERPEDMDTPR VY VS  NPGSDV           S+VF+  DP YS  LL TA KV  FA +YRG+YS+SL+S VCPFYCSYSGY DELL
Sbjct:   24 NYREALSKSLLFFQGQRSGRLPSDQQLSWRSSSGLSDGSSAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSSLEYGKKMGPELQNSRVAIRWATDYLLKCARATPGKLYVGVGDPNGDHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAALAASSMVFRKVDPKYSRLLLATAKKVMQFAIQYRGAYSNSLSSSVCPFYCSYSGYKDELL 237          
BLAST of CF838518 vs. ExPASy Swiss-Prot
Match: GUN17_ARATH (Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 5.021e-82
Identity = 147/214 (68.69%), Postives = 168/214 (78.50%), Query Frame = 3
Query:  150 DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVXXXXXXXXXXXSVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELL 791
            +Y DAL KSILFFEGQRSG+LP NQ+++WR +SGLSDGS+ HVDLVGGYYDAGDN+KFG PMAFTTT+LSWSVIEFG  M++ L+NAK AIRW TDYLLKA T+ P  +YVQVGD N DH CWERPEDMDT R+V+KV    PGSDV           ++VF+ SDPSYS  LLK A+ VF FADKYRG+YS  L   VCPFYCSYSGY DELL
Sbjct:   52 NYKDALTKSILFFEGQRSGKLPSNQRMSWRRDSGLSDGSALHVDLVGGYYDAGDNIKFGFPMAFTTTMLSWSVIEFGGLMKSELQNAKIAIRWATDYLLKA-TSQPDTIYVQVGDANKDHSCWERPEDMDTVRSVFKVDKNIPGSDVAAETAAALAAAAIVFRKSDPSYSKVLLKRAISVFAFADKYRGTYSAGLKPDVCPFYCSYSGYQDELL 264          
BLAST of CF838518 vs. ExPASy Swiss-Prot
Match: GUN9_ARATH (Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE=1 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 4.699e-80
Identity = 141/214 (65.89%), Postives = 162/214 (75.70%), Query Frame = 3
Query:  150 DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVXXXXXXXXXXXSVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELL 791
            +Y +AL KS+LFF+GQRSG LP  QQ++WR +SGLSDGS+ HVDL GGYYDAGDNVKF LPMAFTTT+LSWS +E+G  M   LENA+  IRW TDYLLK + ATPG LYV VGDPN+DH CWERPEDMDTPR VY VS  NPGSDV           S+VF+  D  YS  LL TA  V  FA +Y+G+YSDSL+S VCPFYCSYSGY DEL+
Sbjct:   24 NYKEALSKSLLFFQGQRSGPLPRGQQISWRASSGLSDGSAAHVDLTGGYYDAGDNVKFNLPMAFTTTMLSWSALEYGKRMGPELENARVNIRWATDYLLKCARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSASNPGSDVAAETAAALAAASMVFRKVDSKYSRLLLATAKDVMQFAIQYQGAYSDSLSSSVCPFYCSYSGYKDELM 237          
BLAST of CF838518 vs. ExPASy Swiss-Prot
Match: GUN3_ORYSJ (Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 4.699e-80
Identity = 138/214 (64.49%), Postives = 171/214 (79.91%), Query Frame = 3
Query:  150 DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVXXXXXXXXXXXSVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELL 791
            DY DAL KSILFFEGQRSG+LPP+Q+++WRG+SGLSDGSS  VDLVGGYYDAGDN+KFG P+AF+ T+L+WSV+EFG  M+  L++A+ A+RWG+DYLLKA TA P  +YVQVGD N DH CWERPEDMDTPR VYKV    PG+DV           S+VF+ SDP+Y+++L+  A +VF+FADK+RG+YS  L+  VCP+YCSYSGY DELL
Sbjct:   35 DYRDALTKSILFFEGQRSGKLPPSQRVSWRGDSGLSDGSSIKVDLVGGYYDAGDNMKFGFPLAFSMTMLAWSVVEFGGLMKGELQHARDAVRWGSDYLLKA-TAHPDTVYVQVGDANRDHACWERPEDMDTPRTVYKVDPSTPGTDVAAETAAALAAASLVFRKSDPAYASRLVARAKRVFEFADKHRGTYSTRLSPYVCPYYCSYSGYQDELL 247          
BLAST of CF838518 vs. ExPASy Swiss-Prot
Match: GUN17_ORYSJ (Endoglucanase 17 OS=Oryza sativa subsp. japonica GN=GLU13 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.332e-79
Identity = 140/214 (65.42%), Postives = 163/214 (76.17%), Query Frame = 3
Query:  150 DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVXXXXXXXXXXXSVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELL 791
            DYSDAL KSILFFEGQRSGRLPP+Q+L WR +S L+DG++  VDL GGYYDAGDNVKFG PMAFT TL+SW +I+FG S   H   A+ A+RW TDYL+KA TATP  +YVQVGD   DH CWERPEDMDTPR VYKV   +PGSDV           S+VF+D+DP YS +LL  A++VF+FADKYRG YS SL++ VCP YC YSGY DELL
Sbjct:   24 DYSDALHKSILFFEGQRSGRLPPDQRLRWRRDSALNDGATAGVDLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFGAHAAEAREAVRWATDYLMKA-TATPNTVYVQVGDAFRDHSCWERPEDMDTPRTVYKVDPSHPGSDVAAETAAALAAASIVFRDADPDYSNRLLDRAIQVFEFADKYRGPYSSSLHAAVCPCYCDYSGYKDELL 236          
BLAST of CF838518 vs. ExPASy Swiss-Prot
Match: GUN6_ORYSJ (Endoglucanase 6 OS=Oryza sativa subsp. japonica GN=Os02g0733300 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.512e-78
Identity = 139/214 (64.95%), Postives = 161/214 (75.23%), Query Frame = 3
Query:  150 DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVXXXXXXXXXXXSVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELL 791
            DY DAL KSILFFEGQRSGRLPP+Q+L WR +SGL DG++  VDL GGYYDAGDNVKFG PMAFT TL+SW +I+FG S   H E A+ A+RW TDYL+KA TA P  +YVQVGD   DH CWERPEDMDTPR VYKV   +PGSDV           S+VF+D+DP+YS +LL  A+ VF+FADKYRG YS SL+  VCP YC +SGY DELL
Sbjct:   36 DYGDALHKSILFFEGQRSGRLPPDQRLRWRRDSGLHDGAAASVDLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFGPHKEEARKAVRWATDYLMKA-TAKPNTVYVQVGDAFRDHSCWERPEDMDTPRTVYKVDPSHPGSDVAAETAAALAAGSIVFRDADPAYSKRLLDRAIAVFEFADKYRGPYSSSLHDAVCPCYCDFSGYKDELL 248          
The following BLAST results are available for this feature:
BLAST of CF838518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GUN1_PERAE7.217e-9778.87Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 S... [more]
GUN19_ORYSJ5.184e-8768.69Endoglucanase 19 OS=Oryza sativa subsp. japonica G... [more]
GUN1_ARATH1.081e-8469.63Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE... [more]
GUN4_ORYSJ1.012e-8266.52Endoglucanase 4 OS=Oryza sativa subsp. japonica GN... [more]
GUN3_ARATH3.844e-8267.76Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE... [more]
GUN17_ARATH5.021e-8268.69Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02... [more]
GUN9_ARATH4.699e-8065.89Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE... [more]
GUN3_ORYSJ4.699e-8064.49Endoglucanase 3 OS=Oryza sativa subsp. japonica GN... [more]
GUN17_ORYSJ2.332e-7965.42Endoglucanase 17 OS=Oryza sativa subsp. japonica G... [more]
GUN6_ORYSJ1.512e-7864.95Endoglucanase 6 OS=Oryza sativa subsp. japonica GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06N04_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06N04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838518 ID=CF838518; Name=CF838518; organism=Citrus sinensis; type=EST; length=791bp
GAAATATTATTCCTTTTTCTTATAATTTTTGCATGGTACTGTCAATACTA
CGGCAAATGGATCCTGTTACTAAATTTTCACTAACTTTGCAGATTCTTGG
CTTAACTCTTTGTGCACTTAGCTTATTGTGCTCGGCCTTCACTTTTCAAG
ATTACTCTGATGCTCTTGGGAAGTCCATTCTCTTCTTTGAGGGACAGCGG
TCTGGAAGATTGCCGCCTAACCAGCAGCTTACATGGAGGGGCAATTCCGG
GCTATCTGATGGTTCCTCTTATCATGTTGATCTAGTGGGCGGATATTATG
ATGCTGGTGACAACGTCAAGTTTGGCCTTCCAATGGCTTTCACAACTACA
TTGTTGTCCTGGAGTGTGATTGAATTTGGAAGCTCAATGCAGAACCATCT
TGAGAATGCCAAAGCTGCCATCCGTTGGGGCACAGATTATCTTTTAAAGG
CATCTACTGCCACCCCCGGCGCCTTATACGTCCAGGTAGGGGATCCAAAC
ATGGATCACCACTGCTGGGAGAGACCTGAAGATATGGACACACCACGAAA
TGTTTACAAAGTCTCAACACAGAACCCAGGTTCTGATGTAGCAGCAGAGA
CAGCGGCAGCACTGGCTGCAGCTTCAGTAGTGTTTAAAGACTCCGACCCT
TCTTATTCCACCAAATTGCTTAAAACGGCCATGAAGGTATTTGATTTTGC
AGACAAATATAGAGGTTCTTACAGTGACTCTCTCAACTCAGTGGTCTGCC
CATTTTACTGCTCATATTCAGGATACCTTGATGAGCTCCTT
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