CF838521

Overview
NameCF838521
Unique NameCF838521
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig365 contig Csv1_Contig365:307..1055. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF838521 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 444.891 bits (1143), Expect = 2.180e-124
Identity = 215/237 (90.72%), Postives = 229/237 (96.62%), Query Frame = 1
Query:   37 MESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNE 747
            MEST+KEMRDGASVLD D KSTV GGVEDVYGEDRATEDQLVTPWTISVASGY LLRDP HNKGLAFTEKERDAHYLRGLLPP  ISQQLQEKKLMN+IRQY++PLQKY AMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIF+RPQGLYISLKEKGK+L+VLKNWP++SIQVIVVTDGERILGLGDLGCQG+GIPVGKL+LYTALGG+RPSACLP+T+DVGTNNE
Sbjct:    1 MESTLKEMRDGASVLDMDPKSTVGGGVEDVYGEDRATEDQLVTPWTISVASGYTLLRDPHHNKGLAFTEKERDAHYLRGLLPPTTISQQLQEKKLMNTIRQYQLPLQKYTAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFKRPQGLYISLKEKGKVLDVLKNWPQKSIQVIVVTDGERILGLGDLGCQGIGIPVGKLSLYTALGGVRPSACLPVTIDVGTNNE 237          
BLAST of CF838521 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 433.335 bits (1113), Expect = 6.565e-121
Identity = 210/237 (88.61%), Postives = 227/237 (95.78%), Query Frame = 1
Query:   37 MESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNE 747
            MEST+K++RDGASVLD D K+TV GGVED+YGED ATEDQLVTPWT+SVASGY LLRDPRHNKGLAF +KERDAHYL GLLPP V +Q+LQE+KLMNSIRQY+VPLQKY+AMM+L+ERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPER IQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGG+RPSACLPIT+DVGTNNE
Sbjct:    1 MESTLKDIRDGASVLDLDPKATVGGGVEDLYGEDFATEDQLVTPWTVSVASGYSLLRDPRHNKGLAFNDKERDAHYLCGLLPPVVSTQELQERKLMNSIRQYQVPLQKYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERRIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNE 237          
BLAST of CF838521 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 3.163e-107
Identity = 186/251 (74.10%), Postives = 218/251 (86.85%), Query Frame = 1
Query:   10 KAEKVKRVRMESTMKEMRDGASVLDFDSKS-----TVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNE 747
            + E+   V ++  +K++    +V   DS+S      V GGVEDVYGED ATED  +TPW++SVASGY LLRDP HNKGLAFTEKERDAHYLRGLLPP V++  LQ KK+M++IRQYEVPLQ+Y AMM+L+ERNERLFYKLLI+N+EELLP+VYTPTVGEACQKYG+IF+ PQGLYISLK+KGK+LE+LKNWP++ IQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGGIRPSACLPIT+DVGTNNE
Sbjct:   43 RPERSVGVSVDGAVKDVNAPVAVEVADSESKKPTAVVGGGVEDVYGEDSATEDHFITPWSVSVASGYSLLRDPHHNKGLAFTEKERDAHYLRGLLPPVVVNHDLQVKKMMHNIRQYEVPLQRYQAMMDLQERNERLFYKLLIENIEELLPIVYTPTVGEACQKYGTIFKNPQGLYISLKDKGKVLEILKNWPQKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTNNE 293          
BLAST of CF838521 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 3.497e-106
Identity = 182/213 (85.45%), Postives = 203/213 (95.31%), Query Frame = 1
Query:  109 GGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNE 747
            GGV D+YGED ATED L+TPWT SVASG  LLRDPR+NKGLAFTE ERDAHYLRGLLPP+V +Q+LQEK+LM+++RQYEVPL +Y+A+M+L+ERNERLFYKLLIDNV ELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPE+SIQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGG+RPS+CLP+T+DVGTNNE
Sbjct:   23 GGVRDLYGEDSATEDHLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPSVFNQELQEKRLMHNLRQYEVPLHRYMALMDLQERNERLFYKLLIDNVAELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPVTIDVGTNNE 235          
BLAST of CF838521 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 2.771e-103
Identity = 175/217 (80.65%), Postives = 200/217 (92.17%), Query Frame = 1
Query:   97 STVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNE 747
            + V GGVED+YGED ATED  +TPW++SVASGY LLRDP HNKGLAFTEKERDAH+LRGLLPP V++  LQ KK+M++IRQY+VPLQ+Y AMM+L++RNERLFYKLLI+NVEELLP+VYTPTVGEACQKYGSIF   QGL+ISLK+KG+ILE+LKNWP + IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGG+RPSACLPIT+DVGTNNE
Sbjct:   77 AAVGGGVEDMYGEDTATEDHYITPWSVSVASGYSLLRDPHHNKGLAFTEKERDAHFLRGLLPPVVVNHDLQVKKMMHNIRQYQVPLQRYQAMMDLQQRNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSIFENSQGLFISLKDKGRILEILKNWPHKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITIDVGTNNE 293          
BLAST of CF838521 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 370.933 bits (951), Expect = 4.001e-102
Identity = 172/215 (80.00%), Postives = 203/215 (94.42%), Query Frame = 1
Query:  103 VEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNE 747
            + GGV DVYGE+ AT+DQLVTPW+ SVA G+ LLRDP+HNKGLAFTEKERDAH+LRGLLPP V+SQ+LQEKK + ++RQY+VPLQKY+AMM+L+ERNE+LFYKLL+D+VEELLP+VYTPTVGE CQKYGSIFRRPQGL+ISLK+KG+ILE+L+NWPE+ IQVIVVTDGERILGLGDLGCQGMGIPVGKL+LY+ALGG+ PSACLPIT+DVGTNN+
Sbjct:   17 ITGGVADVYGEEFATQDQLVTPWSFSVACGHSLLRDPQHNKGLAFTEKERDAHFLRGLLPPVVLSQELQEKKFLTTLRQYQVPLQKYMAMMDLQERNEKLFYKLLVDHVEELLPLVYTPTVGEGCQKYGSIFRRPQGLFISLKDKGRILELLRNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGVCPSACLPITLDVGTNNQ 231          
BLAST of CF838521 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 370.163 bits (949), Expect = 6.825e-102
Identity = 182/243 (74.90%), Postives = 210/243 (86.42%), Query Frame = 1
Query:   19 KVKRVRMESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNE 747
            +V+ V MES  +  +        +  +   GGVED+     ATE+  VTPW  SVASGY LLRDP HNKGLAF+EKERDAHYLRGLLPPAV+SQ LQ KK+M+++RQY VPLQ+Y+AMM+L+ERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFR+PQGLY+SLK+KGK+L+VL+NWPER+IQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGG+RPSACLPIT+DVGTNNE
Sbjct:   55 RVEAVAMESAAETEKK-------EEVAAAGGGVEDM-----ATEEVPVTPWAFSVASGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKVLDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNE 285          
BLAST of CF838521 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 8.914e-102
Identity = 175/214 (81.78%), Postives = 199/214 (92.99%), Query Frame = 1
Query:   94 KSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVG 735
            +STV GGV+DVYGED ATEDQ +TPWT+SVASG+ LLR+P +NKGLAF+E+ERD HYLRGLLPP VIS  LQ KK+MNSIR+Y+VPLQ+Y+AMM+L+E NERLFYKLLIDNVEELLP+VYTPTVGEACQKYG IF+RPQGL+ SLKEKGKI EVLKNWPE+ IQVIVVTDGERILGLGDLGCQGMGIPVGKL+LY+ALGGIRPSACLP+T+DVG
Sbjct:    4 ESTVTGGVQDVYGEDSATEDQSITPWTLSVASGFSLLRNPHYNKGLAFSERERDTHYLRGLLPPVVISHDLQVKKMMNSIRKYDVPLQRYMAMMDLQEMNERLFYKLLIDNVEELLPIVYTPTVGEACQKYGWIFKRPQGLFFSLKEKGKIHEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGIRPSACLPVTIDVG 217          
BLAST of CF838521 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 6.841e-94
Identity = 163/202 (80.69%), Postives = 182/202 (90.10%), Query Frame = 1
Query:  142 ATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNE 747
            A+E+  V PW  SVASGY LLRDP HNKGLAFTE+ERD HYLRGLLPPAV+SQ+LQ KK MN++RQY+ PLQ+Y+AMM L+E +ERLFYKLLIDNV ELLP VYTPTVGEACQKYGSIF RPQGLY+SLK+KGK+LEVL+NWP R+IQVI VTDGERILGLGDLGCQGMGIPVGKLALYTALGG+ PS CLPIT+DVGTNNE
Sbjct:   81 ASEELPVMPWATSVASGYTLLRDPHHNKGLAFTEEERDGHYLRGLLPPAVLSQELQIKKFMNTLRQYQTPLQRYIAMMNLQETDERLFYKLLIDNVVELLPFVYTPTVGEACQKYGSIFGRPQGLYVSLKDKGKVLEVLRNWPHRNIQVICVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVDPSVCLPITIDVGTNNE 282          
BLAST of CF838521 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.302e-60
Identity = 108/186 (58.06%), Postives = 140/186 (75.27%), Query Frame = 1
Query:  190 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNE 747
            GY L RDP  NK LAFT +ER    + GLLPP +ISQ+LQ  +++ +  +      +Y+ +M+L++RNE+LFY +L+ +VE+ +P+VYTPTVG ACQ+Y   FR+P+GL+IS+ +KG I  VL  WPE  ++ IVVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLPIT+DVGT NE
Sbjct:   15 GYLLTRDPHLNKDLAFTLEERQQLNIHGLLPPCIISQELQVLRIIKNFERLNSDFDRYLLLMDLQDRNEKLFYSVLMSDVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWPEDVVKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQCLPITLDVGTENE 200          
The following BLAST results are available for this feature:
BLAST of CF838521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_POPTR2.180e-12490.72NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOX_VITVI6.565e-12188.61NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_FLAPR3.163e-10774.10NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_PHAVU3.497e-10685.45NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_FLATR2.771e-10380.65NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_MESCR4.001e-10280.00NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_ORYSJ6.825e-10274.90NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_SOLLC8.914e-10281.78NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOC_MAIZE6.841e-9480.69NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_MOUSE1.302e-6058.06NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06N07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06N07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838521 ID=CF838521; Name=CF838521; organism=Citrus sinensis; type=EST; length=749bp
TTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGAGAATGGAGAGCACCAT
GAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACTCGAAATCCA
CCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGTGCCACCGAG
GACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGGGTACTGTTT
GTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTGAGAAAGAGA
GGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTTATAAGTCAA
CAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATATGAAGTTCC
GCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAAATGAAAGAC
TGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTCCCAGTCGTT
TACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTATCTTCAG
GCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGAAGGGAAAGATTCTTG
AGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCACA
GATGGTGAGCGCATTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGGG
AATTCCTGTTGGGAAATTGGCTTTGTACACAGCACTTGGAGGCATTCGTC
CCTCAGCATGTTTGCCCATAACCGTTGATGTGGGTACAAACAATGAGCA
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