CF838533
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838533 vs. ExPASy Swiss-Prot
Match: SERA_ARATH (D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At1g17745 PE=1 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 8.064e-59 Identity = 115/172 (66.86%), Postives = 135/172 (78.49%), Query Frame = 2 Query: 290 KPTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 805 KP +L+ EKLG+AG++LL EF +VDC+Y+LSPE+L K++ DALIVRSGTKV R+VFE++ GRLKVVGRAGVGIDNVDL AATE GCL RNVAQADAS+KAGKW+R+KYVGVSLVGKTLAV+GFGKVG+EVARRAKGLGM VI+HDPY Sbjct: 82 KPRILVTEKLGEAGVNLLREFGDVDCSYDLSPEDLKKKVAESDALIVRSGTKVTREVFEAAKGRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGKWERSKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMTVISHDPY 253
BLAST of CF838533 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.874e-34 Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 2 Query: 299 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 805 +L+ + L + + +L E V+ A L+ EEL KI D L+VRSGTKV RDV E A +LKV+GRAGVG+DN+D+ AATE G + RN+ QA AS+K G+W R ++ G+ L GKTL V+G G++G +V +RAK GM++I +DPY Sbjct: 4 ILVTDPLHEDAIKILEEVGEVEVATGLTKEELLEKIKDADVLVVRSGTKVTRDVIEK-AEKLKVIGRAGVGVDNIDVEAATEKGIIVVNAPDASSISVAELTMGLMLAAARNIPQATASLKRGEWDRKRFKGIELYGKTLGVIGLGRIGQQVVKRAKAFGMNIIGYDPY 171
BLAST of CF838533 vs. ExPASy Swiss-Prot
Match: SERA_METTH (D-3-phosphoglycerate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=serA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.097e-31 Identity = 71/169 (42.01%), Postives = 102/169 (60.36%), Query Frame = 2 Query: 299 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 805 VLIA+ + + G+ L E A V ++PEEL I DA++VRS TKV R+V E+ A RLK++ RAGVG+DNVD+ AAT+ G + R +A AD SVK GKW++N+++G+ L GKTL ++G G++GS+V R K GM ++ +DPY Sbjct: 6 VLIADSINEKGISELEEVAEVVVNTTITPEELLDAIKDFDAIVVRSRTKVTREVIEA-APRLKIIARAGVGVDNVDVKAATDRGIMVINAPESTSITVAEHSIGLMLALARKIAIADRSVKEGKWEKNRFMGIELNGKTLGIIGMGRIGSQVVVRTKAFGMDIMVYDPY 173
BLAST of CF838533 vs. ExPASy Swiss-Prot
Match: SERA_ARCFU (D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus GN=serA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.136e-28 Identity = 67/170 (39.41%), Postives = 103/170 (60.59%), Query Frame = 2 Query: 299 VLIAEKLGQAGLDLLNEFA-NVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 805 VL+AE + + +D + + V+ +S EEL ++ +A++VRS TKV+ +V ++ A LK++GRAGVG+DN+D+ AAT+ G + R + QAD SVK GKW+R K++G+ L GKT V+G G+VG EVA+R K L M+V+A+DP+ Sbjct: 3 VLVAEPISEEAIDYMRKNGLEVEVKTGMSREELIREVPKYEAIVVRSQTKVDAEVIQA-AKNLKIIGRAGVGVDNIDINAATQRGIVVVNAPGGNTISTAEHAIALMLAAARKIPQADRSVKEGKWERKKFMGIELRGKTAGVIGLGRVGFEVAKRCKALEMNVLAYDPF 171
BLAST of CF838533 vs. ExPASy Swiss-Prot
Match: SERA_SYNY3 (D-3-phosphoglycerate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=serA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.797e-27 Identity = 61/169 (36.09%), Postives = 99/169 (58.58%), Query Frame = 2 Query: 299 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 805 VL+++ + Q G+D+L + A VD LS E+ + DA+++RS TKV + ++ + +LK++GRAGVG+DN+D+ AAT G + R++ A+ SVK KW+R +++G + KTL V+G GK+GS VA AK +GM ++A+DP+ Sbjct: 32 VLVSDSIDQVGIDILKQVAQVDVKTGLSEAEIIDIVPEYDAIMLRSATKVTEKIIQAGS-QLKIIGRAGVGVDNIDVPAATRQGIVVVNSPEGNTIAAAEHALAMMMALARHIPDANKSVKESKWERKQFIGTEVYKKTLGVVGLGKIGSHVAGVAKAMGMKLLAYDPF 199
BLAST of CF838533 vs. ExPASy Swiss-Prot
Match: SERA_PONAB (D-3-phosphoglycerate dehydrogenase OS=Pongo abelii GN=PHGDH PE=2 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 2.797e-27 Identity = 67/143 (46.85%), Postives = 85/143 (59.44%), Query Frame = 2 Query: 374 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 802 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GKTL +LG G++G EVA R + LGM I +DP Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVAIRMQSLGMKTIGYDP 176
BLAST of CF838533 vs. ExPASy Swiss-Prot
Match: SERA_PANTR (D-3-phosphoglycerate dehydrogenase OS=Pan troglodytes GN=PHGDH PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.771e-27 Identity = 66/143 (46.15%), Postives = 84/143 (58.74%), Query Frame = 2 Query: 374 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 802 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GKTL +LG G++G EVA R + GM I +DP Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDP 176
BLAST of CF838533 vs. ExPASy Swiss-Prot
Match: SERA_MACFA (D-3-phosphoglycerate dehydrogenase OS=Macaca fascicularis GN=PHGDH PE=2 SV=4) HSP 1 Score: 121.709 bits (304), Expect = 4.771e-27 Identity = 66/143 (46.15%), Postives = 84/143 (58.74%), Query Frame = 2 Query: 374 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 802 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GKTL +LG G++G EVA R + GM I +DP Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDP 176
BLAST of CF838533 vs. ExPASy Swiss-Prot
Match: SERA_HUMAN (D-3-phosphoglycerate dehydrogenase OS=Homo sapiens GN=PHGDH PE=1 SV=4) HSP 1 Score: 121.709 bits (304), Expect = 4.771e-27 Identity = 66/143 (46.15%), Postives = 84/143 (58.74%), Query Frame = 2 Query: 374 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 802 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GKTL +LG G++G EVA R + GM I +DP Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDP 176
BLAST of CF838533 vs. ExPASy Swiss-Prot
Match: SERA_RAT (D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh PE=1 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 1.063e-26 Identity = 65/143 (45.45%), Postives = 83/143 (58.04%), Query Frame = 2 Query: 374 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 802 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW R K++G L GKTL +LG G++G EVA R + GM + +DP Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMLMCLARQIPQATASMKDGKWDRKKFMGTELNGKTLGILGLGRIGREVAARMQAFGMKTVGYDP 176 The following BLAST results are available for this feature:
BLAST of CF838533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838533 ID=CF838533; Name=CF838533; organism=Citrus sinensis; type=EST; length=807bpback to top |