CF838544

Overview
NameCF838544
Unique NameCF838544
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7047 contig Csv1_Contig7047:4..766. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPK6_ARATH (CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana GN=CIPK6 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.258e-50
Identity = 102/138 (73.91%), Postives = 113/138 (81.88%), Query Frame = 2
Query:  347 NSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            N + GG     LLHG+YELGR+LGHGTFAKVY ARN+QTGKS+A               +QIKREISVM+MVKH +IVELHEVMASKSKIYFAM+LV+GGELF K+AKGRLREDVARVYFQQLISAVDFCHSRGVYHR
Sbjct:    9 NGSDGGSSTG-LLHGRYELGRLLGHGTFAKVYHARNIQTGKSVAMKVVGKEKVVKVGMVDQIKREISVMRMVKHPNIVELHEVMASKSKIYFAMELVRGGELFAKVAKGRLREDVARVYFQQLISAVDFCHSRGVYHR 145          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.791e-42
Identity = 82/132 (62.12%), Postives = 104/132 (78.79%), Query Frame = 2
Query:  365 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            D    +L  KYELGR+LG GTFAKVY ARN++TG+S+A               +QIKREISVM++V+H H+V LHEVMASK+KIYFAM+ VKGGELF+K++KG+L+E++AR YFQQLI A+D+CHSRGVYHR
Sbjct:    2 DKNGIVLMRKYELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSKGKLKENIARKYFQQLIGAIDYCHSRGVYHR 133          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPK5_ORYSJ (CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.172e-42
Identity = 82/132 (62.12%), Postives = 104/132 (78.79%), Query Frame = 2
Query:  365 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            + + ++L  +YELGRMLG GTFAKVY ARNL + +S+A               +QIKREIS+M++V+H +IV+LHEVMASKSKIYFAM+ V+GGELF+++A+GRL+ED AR YFQQLI AVDFCHSRGVYHR
Sbjct:    2 EKKASILMNRYELGRMLGQGTFAKVYHARNLASNQSVAIKVIDKEKVLRVGMIDQIKREISIMRLVRHPNIVQLHEVMASKSKIYFAMEYVRGGELFSRVARGRLKEDAARKYFQQLIGAVDFCHSRGVYHR 133          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPKJ_ARATH (CBL-interacting serine/threonine-protein kinase 19 OS=Arabidopsis thaliana GN=CIPK19 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.105e-41
Identity = 82/127 (64.57%), Postives = 100/127 (78.74%), Query Frame = 2
Query:  380 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            L+ GKYE+GR+LGHGTFAKVYLARN Q+G+S+A                 IKREIS+++ V+H +IV+L EVMA+KSKIYF M+ VKGGELFNK+AKGRL+E++AR YFQQLISAV FCH RGVYHR
Sbjct:   23 LILGKYEMGRLLGHGTFAKVYLARNAQSGESVAIKVIDKEKVLKSGLIAHIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEYVKGGELFNKVAKGRLKEEMARKYFQQLISAVSFCHFRGVYHR 149          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPKI_ORYSJ (CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.013e-40
Identity = 80/127 (62.99%), Postives = 100/127 (78.74%), Query Frame = 2
Query:  380 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            +L  +YE+G++LG GTFAKVY  RN+ T +S+A               +QIKREISVMK+V+H +IV+L+EVMA+KSKIYF ++ VKGGELFNK+AKGRL+ED AR YFQQL+SAVDFCHSRGVYHR
Sbjct:   10 ILLRRYEIGKLLGQGTFAKVYHGRNIVTSQSVAIKVIDKDKIFKVGLMDQIKREISVMKLVRHPNIVQLYEVMATKSKIYFVLEYVKGGELFNKVAKGRLKEDAARKYFQQLVSAVDFCHSRGVYHR 136          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPK2_ORYSJ (CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.484e-40
Identity = 80/132 (60.61%), Postives = 101/132 (76.52%), Query Frame = 2
Query:  365 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            + R  +L  KYE+G++LG GTFAKVY ARN +T +S+A               +QIKREISVMK+V+H +IV+L+EVMA+K+KIYF ++ VKGGELFNK+ +GRL+ED AR YFQQLI AVDFCHSRGVYHR
Sbjct:    3 EQRGNMLMKKYEMGKLLGQGTFAKVYHARNTETSESVAIKMIDKEKVLKGGLMDQIKREISVMKLVRHPNIVQLYEVMATKTKIYFVLEHVKGGELFNKVQRGRLKEDAARKYFQQLICAVDFCHSRGVYHR 134          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPKI_ARATH (CBL-interacting serine/threonine-protein kinase 18 OS=Arabidopsis thaliana GN=CIPK18 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.856e-40
Identity = 88/176 (50.00%), Postives = 111/176 (63.07%), Query Frame = 2
Query:  233 PQPPPQHKRKPERII*LAKLGTYIHIKGKKDRVEMATSNSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            P PPP H  KP  +  +A L   I I        ++  +       R  +L GKYELG++LGHGTFAKVYLA+N+++G  +A                 IKREIS+++ V+H +IV L EVMA+KSKIYF M+ V GGELFN +AKGRL E+ AR YFQQLIS+V FCH RGVYHR
Sbjct:   21 PPPPPPHP-KPYALRYMADLLGRIGIMDTDKDGNISPQSPRSPRSPRNNILMGKYELGKLLGHGTFAKVYLAQNIKSGDKVAIKVIDKEKIMKSGLVAHIKREISILRRVRHPYIVHLFEVMATKSKIYFVMEYVGGGELFNTVAKGRLPEETARRYFQQLISSVSFCHGRGVYHR 195          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPKC_ARATH (CBL-interacting serine/threonine-protein kinase 12 OS=Arabidopsis thaliana GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.856e-40
Identity = 78/127 (61.42%), Postives = 101/127 (79.53%), Query Frame = 2
Query:  380 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            L+ G+YE+G++LGHGTFAKVYLARN++T +S+A                 IKREIS+++ V+H +IV+L EVMA+K+KIYF M+ V+GGELFNK+AKGRL+E+VAR YFQQLISAV FCH+RGVYHR
Sbjct:   21 LILGRYEMGKLLGHGTFAKVYLARNVKTNESVAIKVIDKEKVLKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVTFCHARGVYHR 147          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPK6_ORYSJ (CBL-interacting protein kinase 6 OS=Oryza sativa subsp. japonica GN=CIPK6 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.648e-40
Identity = 82/136 (60.29%), Postives = 105/136 (77.21%), Query Frame = 2
Query:  356 GGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            GGG    T+L G+YE+GR+LGHG F +V++AR+L+TG+S+A               EQIKREI+VMK V H +IVELHEVMA++SKIY A++LV+GGELF +I + GR+RED AR YF+QL+SAVDFCHSRGVYHR
Sbjct:   14 GGG----TVLQGRYEMGRVLGHGNFGRVHVARDLRTGRSVAVKVVAKEKVVRAGMMEQIKREIAVMKRVSHPNIVELHEVMATRSKIYLALELVRGGELFGRIVRLGRVREDAARHYFRQLVSAVDFCHSRGVYHR 145          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPKF_ARATH (CBL-interacting serine/threonine-protein kinase 15 OS=Arabidopsis thaliana GN=CIPK15 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.796e-39
Identity = 80/132 (60.61%), Postives = 101/132 (76.52%), Query Frame = 2
Query:  365 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            + + ++L  +YE+G+ LG GTFAKVY AR+L+TG S+A               EQIKREIS M++++H +IVELHEVMA+KSKIYF M+ VKGGELFNK++ G+LREDVAR YFQQL+ AVDFCHSRGV HR
Sbjct:    2 EKKGSVLMLRYEVGKFLGQGTFAKVYHARHLKTGDSVAIKVIDKERILKVGMTEQIKREISAMRLLRHPNIVELHEVMATKSKIYFVMEHVKGGELFNKVSTGKLREDVARKYFQQLVRAVDFCHSRGVCHR 133          
The following BLAST results are available for this feature:
BLAST of CF838544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 282
Match NameE-valueIdentityDescription
CIPK6_ARATH1.258e-5073.91CBL-interacting serine/threonine-protein kinase 6 ... [more]
CIPKK_ARATH4.791e-4262.12CBL-interacting serine/threonine-protein kinase 20... [more]
CIPK5_ORYSJ8.172e-4262.12CBL-interacting protein kinase 5 OS=Oryza sativa s... [more]
CIPKJ_ARATH3.105e-4164.57CBL-interacting serine/threonine-protein kinase 19... [more]
CIPKI_ORYSJ2.013e-4062.99CBL-interacting protein kinase 18 OS=Oryza sativa ... [more]
CIPK2_ORYSJ4.484e-4060.61CBL-interacting protein kinase 2 OS=Oryza sativa s... [more]
CIPKI_ARATH5.856e-4050.00CBL-interacting serine/threonine-protein kinase 18... [more]
CIPKC_ARATH5.856e-4061.42CBL-interacting serine/threonine-protein kinase 12... [more]
CIPK6_ORYSJ7.648e-4060.29CBL-interacting protein kinase 6 OS=Oryza sativa s... [more]
CIPKF_ARATH3.796e-3960.61CBL-interacting serine/threonine-protein kinase 15... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06O06_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06O06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838544 ID=CF838544; Name=CF838544; organism=Citrus sinensis; type=EST; length=762bp
AACACTCCCGCGTATACACCATCACCATCTATAAGCGTTTGATTAATAGC
AGCAAATCAAAATCCTTATCGTCTCCCCCCAAGAAAAAATAAATAAGCAA
ACACTAAAAGCCCCTTCAGGGAATGCAGAGAGATGAGAGGACCTTCGTTG
AGATTGCCTGAGCTGTGTTTACGTGCCCAGCGGTGCGTCGGCGGCCGTAA
TTGCCACCGGAAACACGTCGAAGACGGGTGATCCTCAACCACCACCACAA
CACAAAAGAAAACCTGAAAGAATTATTTAATTAGCTAAACTTGGTACATA
TATACATATAAAAGGAAAAAAAGACCGCGTGGAGATGGCTACATCAAACA
GTAACGGCGGAGGCGATGACAGGCCGACGTTGCTACATGGGAAATACGAG
CTGGGGCGTATGTTAGGCCACGGAACCTTCGCGAAGGTGTACCTGGCAAG
AAATTTGCAGACGGGGAAAAGCATGGCCATGAAAGTTGTTGGTAAAGACA
AGGTTATCAAGGTGGGCATGATGGAGCAAATCAAGCGTGAAATCTCTGTC
ATGAAGATGGTGAAGCACAAGCACATCGTTGAGCTACACGAAGTCATGGC
AAGTAAGTCCAAGATTTACTTCGCCATGGACCTCGTCAAAGGCGGCGAGC
TGTTCAACAAGATTGCCAAAGGAAGATTACGAGAAGATGTTGCAAGGGTT
TATTTCCAGCAGCTGATTTCAGCCGTTGATTTCTGCCACAGCCGCGGCGT
TTATCACCGCGA
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