CF838549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 8.181e-56 Identity = 105/196 (53.57%), Postives = 146/196 (74.49%), Query Frame = 3 Query: 219 LLTQPEEPPKGPELN-LRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNP-FCASNLVATCALSHW-GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 LL ++ PE+N KEQECL +LK C N++EFK+VHA +K F++ F AS+++A CA S W SM+YA SIFR ID+P FDFN++IRG+V + FEEAL YNEM +RG EPD+FT+P L KAC +L++++EG QIHG VFKLG E D+FVQNSLINMYG+C ++E +SA+F++++ K+ ASW +++ Sbjct: 10 LLASRDDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMV 205
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.827e-29 Identity = 67/177 (37.85%), Postives = 102/177 (57.63%), Query Frame = 3 Query: 270 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 ++ L++L CK L+ + +HA ++K G + S L+ C LS H+ + YA S+F+ I EP +N++ RG AL LY M G+ P+ +TFP + K+CAK +A KEG QIHGHV KLG + DL+V SLI+MY + ++E A +F + + V S+ A+I Sbjct: 31 IRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALI 207 HSP 2 Score: 87.8113 bits (216), Expect = 7.486e-17 Identity = 59/188 (31.38%), Postives = 94/188 (50.00%), Query Frame = 3 Query: 261 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----SHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFK--LGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 N+R E +T++ C ++E ++VH + GF SNL AL S G ++ AC +F ++ +N+LI G+ ++EAL L+ EM G P+ T ++ ACA L A+ G IH ++ K G ++ SLI+MY KC +E A +F + KS++SW A+I Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF------GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442 HSP 3 Score: 85.8853 bits (211), Expect = 2.845e-16 Identity = 53/200 (26.50%), Postives = 97/200 (48.50%), Query Frame = 3 Query: 294 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVA--------------------------TCALSHWGSMDY---ACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +LK+C + FK+ +H HVLK G + + ++L++ T + + S Y A +F +I +N++I G+ + ++EAL L+ +M + V PD T + ACA+ +++ G Q+H + GF +L + N+LI++Y KC ++E A +F+++ K V SW +I Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.454e-28 Identity = 71/202 (35.15%), Postives = 110/202 (54.46%), Query Frame = 3 Query: 198 SVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA-TCALSHWGSMDYACSIFRQIDEPGA-FDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +VLH S ++ K LN + + LK CK ++E K H + K G + + LVA +C L S+ +A +F + G F +NSLIRG+ EA+ L+ M G+ PD +TFP ACAK +A G+QIHG + K+G+ DLFVQNSL++ Y +C +++ A +F +M +++V SW ++I Sbjct: 6 NVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207 HSP 2 Score: 80.4925 bits (197), Expect = 1.195e-14 Identity = 53/174 (30.46%), Postives = 90/174 (51.72%), Query Frame = 3 Query: 294 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF---NSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 ++ C LE+ + KV+A + G N S LV + ++D A +F DE GA + N++ +V+ EAL ++N M + GV PD + + +C++L+ + G HG+V + GFE + N+LI+MY KC + + A IF +M K+V +W +I+ Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN--AIDVAKRLF---DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.608e-27 Identity = 64/173 (36.99%), Postives = 94/173 (54.34%), Query Frame = 3 Query: 288 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGV---EPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 L++L+ CK L K++ A ++ G +PF +S L+A CALS +DY+ I + I+ P F +N IRGF + +E+ LY +M G PDHFT+P LFK CA L+ G I GHV KL E V N+ I+M+ C +E A +F + + + SW +I Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLI 229 HSP 2 Score: 72.0182 bits (175), Expect = 4.251e-12 Identity = 36/126 (28.57%), Postives = 67/126 (53.17%), Query Frame = 3 Query: 420 GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 G M+ A +F + +N LI G+ K + E+A+++Y M GV+PD T L +C+ L L G + + +V + G + + N+L++M+ KC + A IF ++++++ SW +I Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMI 330 HSP 3 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 36/126 (28.57%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 420 GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 G +D + +F ++E +N++I G V+ + ++AL L+ EM +PD T AC++L AL G+ IH ++ K ++ + SL++MY KC + A ++F + ++ ++ AII Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.979e-27 Identity = 59/171 (34.50%), Postives = 104/171 (60.82%), Query Frame = 3 Query: 291 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFK--QMDQKSVASWRAII 797 +++ + + + K++HA +L G ++ F + L+ A S +G + +A +F + P F +N++IRG+ ++ F++AL +Y+ M V PD FTFP L KAC+ L L+ G +H VF+LGF+ D+FVQN LI +Y KC ++ A +F+ + ++++ SW AI+ Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194 HSP 2 Score: 82.8037 bits (203), Expect = 2.408e-15 Identity = 46/169 (27.22%), Postives = 91/169 (53.85%), Query Frame = 3 Query: 303 TC-KNLEEFKKVHAHVLKWGFFWNP---FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 TC ++L++ + +HA V+K G P + + A C G + A +F ++ P +N++I G+ K+ EA+ +++EM + V PD + + ACA++ +L++ ++ +V + + D+F+ ++LI+M+ KC VE A +F + + V W A+I Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC-----GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396 HSP 3 Score: 72.7886 bits (177), Expect = 2.492e-12 Identity = 49/173 (28.32%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 294 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA--FDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +LK C L + VHA V + GF + F + L+A A + A ++F + P + +++ + ++ + EAL ++++M + V+PD ++ A LQ LK+G IH V K+G E + + SL MY KC +V A +F +M ++ W A+I Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCR--RLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.361e-26 Identity = 61/172 (35.47%), Postives = 98/172 (56.98%), Query Frame = 3 Query: 285 CLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERG-VEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 CL++L +CKNL ++H +K+G + + L+ CA+S ++ YA + EP AF FN+L+RG+ + + ++ ++ EM +G V PD F+F + KA ++L+ G Q+H K G E LFV +LI MYG C VEFA +F +M Q ++ +W A+I Sbjct: 8 CLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI 179 HSP 2 Score: 70.4774 bits (171), Expect = 1.237e-11 Identity = 38/145 (26.21%), Postives = 72/145 (49.66%), Query Frame = 3 Query: 366 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQK-SVASWRAII 797 WN A + A G ++ A IF ++ ++++I G + F E+ + E+ G+ P+ + + AC++ + + G +HG V K G+ + + V N+LI+MY +C V A +F+ M +K + SW ++I Sbjct: 206 WNVMLAGYIKA-------GELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMI 343
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 8.822e-26 Identity = 58/171 (33.92%), Postives = 98/171 (57.31%), Query Frame = 3 Query: 288 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 L+ L+ C++L E ++H ++K N S L+ C ++ YA S+F ID P + +NS+IRG+ ++AL Y EM +G PD+FTFP + KAC+ L+ ++ G +HG V K GFE +++V L++MY C +V + +F+ + Q +V +W ++I Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLI 180 HSP 2 Score: 85.8853 bits (211), Expect = 2.845e-16 Identity = 54/182 (29.67%), Postives = 90/182 (49.45%), Query Frame = 3 Query: 294 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFE--------YDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +LK C L + + VH V+K GF N + V+TC L + G ++Y +F I + + SLI GFV + +F +A+ + EM GV+ + L AC + + + G HG + LGF+ +++ + SLI+MY KC + A +F M ++++ SW +II Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMY-----VSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSII 289 HSP 3 Score: 73.9442 bits (180), Expect = 1.119e-12 Identity = 48/172 (27.91%), Postives = 84/172 (48.84%), Query Frame = 3 Query: 306 CKNLEEFKKVHAHVLKWGFFWNPFCASN-----LVATCALSHW---GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 CK++ K H + GF +P+ S ++AT + + G + A +F + E +NS+I G+ ++ EEAL ++ +M + G+ PD TF ++ +A + G IH +V K GF D + +L+NMY K E A F+ +++K +W +I Sbjct: 221 CKDIVTGKWFHGFLQGLGF--DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVI 390
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.378e-25 Identity = 57/171 (33.33%), Postives = 100/171 (58.48%), Query Frame = 3 Query: 288 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMF-ERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +++++ C +L + K+ H H+++ G F +P+ AS L A ALS + S++YA +F +I +P +F +N+LIR + +++ + +M E P+ +TFP L KA A++ +L G +HG K D+FV NSLI+ Y C ++ A +F + +K V SW ++I Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMI 204 HSP 2 Score: 83.9593 bits (206), Expect = 1.081e-15 Identity = 46/157 (29.30%), Postives = 84/157 (53.50%), Query Frame = 3 Query: 327 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 + +H +K + F A++L+ C S G +D AC +F I E +NS+I GFV+ ++AL L+ +M V+ H T + ACAK++ L+ G Q+ ++ + +L + N++++MY KC +E A +F M++K +W ++ Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIH-CYFS-CGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 305
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP321_ARATH (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 9.754e-25 Identity = 68/194 (35.05%), Postives = 100/194 (51.55%), Query Frame = 3 Query: 261 NLRLKEQECLTILKTC--------------KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 NLRL ++E L + C K+L E ++ HA +LK G F + F AS LVA A + ++ YA SI +I P F NS+IR + E AL ++ EM V PD ++F + KACA +EG QIHG K G D+FV+N+L+N+YG+ E A + +M + SW +++ Sbjct: 20 NLRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 213 HSP 2 Score: 76.6406 bits (187), Expect = 1.726e-13 Identity = 41/153 (26.80%), Postives = 78/153 (50.98%), Query Frame = 3 Query: 342 HVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVE-PDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +V W F + + A+ LV A +F + +N+++ + + E L ++N+M + E PD FT ++ ACA L +L +G +H ++ K G E + F+ +L++MY KC K++ A +F+ ++ V++W +II Sbjct: 236 NVESWNFMISGYAAAGLVKE-----------AKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSII 377
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP188_ARATH (Pentatricopeptide repeat-containing protein At2g36730 OS=Arabidopsis thaliana GN=PCMP-E44 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.274e-24 Identity = 56/175 (32.00%), Postives = 97/175 (55.43%), Query Frame = 3 Query: 273 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 ++ +CL LK C +++ ++H + + F S LV +LS + +A ++ + +N L RG+ E++++Y+EM RG++P+ TFP L KACA L G QI V K GF++D++V N+LI++YG C+K A +F +M +++V SW +I+ Sbjct: 12 RKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIM 186 The following BLAST results are available for this feature:
BLAST of CF838549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 184
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838549 ID=CF838549; Name=CF838549; organism=Citrus sinensis; type=EST; length=797bpback to top |