CF838549

Overview
NameCF838549
Unique NameCF838549
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.181e-56
Identity = 105/196 (53.57%), Postives = 146/196 (74.49%), Query Frame = 3
Query:  219 LLTQPEEPPKGPELN-LRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNP-FCASNLVATCALSHW-GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            LL   ++    PE+N    KEQECL +LK C N++EFK+VHA  +K   F++  F AS+++A CA S W  SM+YA SIFR ID+P  FDFN++IRG+V  + FEEAL  YNEM +RG EPD+FT+P L KAC +L++++EG QIHG VFKLG E D+FVQNSLINMYG+C ++E +SA+F++++ K+ ASW +++
Sbjct:   10 LLASRDDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMV 205          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.827e-29
Identity = 67/177 (37.85%), Postives = 102/177 (57.63%), Query Frame = 3
Query:  270 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            ++    L++L  CK L+  + +HA ++K G     +  S L+  C LS H+  + YA S+F+ I EP    +N++ RG         AL LY  M   G+ P+ +TFP + K+CAK +A KEG QIHGHV KLG + DL+V  SLI+MY +  ++E A  +F +   + V S+ A+I
Sbjct:   31 IRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALI 207          

HSP 2 Score: 87.8113 bits (216), Expect = 7.486e-17
Identity = 59/188 (31.38%), Postives = 94/188 (50.00%), Query Frame = 3
Query:  261 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----SHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFK--LGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            N+R  E   +T++  C    ++E  ++VH  +   GF       SNL    AL    S  G ++ AC +F ++       +N+LI G+     ++EAL L+ EM   G  P+  T  ++  ACA L A+  G  IH ++ K   G      ++ SLI+MY KC  +E A  +F  +  KS++SW A+I
Sbjct:  261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF------GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442          

HSP 3 Score: 85.8853 bits (211), Expect = 2.845e-16
Identity = 53/200 (26.50%), Postives = 97/200 (48.50%), Query Frame = 3
Query:  294 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVA--------------------------TCALSHWGSMDY---ACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            +LK+C   + FK+   +H HVLK G   + +  ++L++                          T  +  + S  Y   A  +F +I       +N++I G+ +   ++EAL L+ +M +  V PD  T   +  ACA+  +++ G Q+H  +   GF  +L + N+LI++Y KC ++E A  +F+++  K V SW  +I
Sbjct:  140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.454e-28
Identity = 71/202 (35.15%), Postives = 110/202 (54.46%), Query Frame = 3
Query:  198 SVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA-TCALSHWGSMDYACSIFRQIDEPGA-FDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            +VLH S ++       K   LN     +   + LK CK ++E K  H  + K G   +    + LVA +C L    S+ +A  +F   +  G  F +NSLIRG+       EA+ L+  M   G+ PD +TFP    ACAK +A   G+QIHG + K+G+  DLFVQNSL++ Y +C +++ A  +F +M +++V SW ++I
Sbjct:    6 NVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207          

HSP 2 Score: 80.4925 bits (197), Expect = 1.195e-14
Identity = 53/174 (30.46%), Postives = 90/174 (51.72%), Query Frame = 3
Query:  294 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF---NSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            ++  C  LE+ +   KV+A +   G   N    S LV      +  ++D A  +F   DE GA +    N++   +V+     EAL ++N M + GV PD  +  +   +C++L+ +  G   HG+V + GFE    + N+LI+MY KC + + A  IF +M  K+V +W +I+
Sbjct:  242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN--AIDVAKRLF---DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.608e-27
Identity = 64/173 (36.99%), Postives = 94/173 (54.34%), Query Frame = 3
Query:  288 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGV---EPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            L++L+ CK L   K++ A ++  G   +PF +S L+A CALS    +DY+  I + I+ P  F +N  IRGF +    +E+  LY +M   G     PDHFT+P LFK CA L+    G  I GHV KL  E    V N+ I+M+  C  +E A  +F +   + + SW  +I
Sbjct:   57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLI 229          

HSP 2 Score: 72.0182 bits (175), Expect = 4.251e-12
Identity = 36/126 (28.57%), Postives = 67/126 (53.17%), Query Frame = 3
Query:  420 GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            G M+ A  +F +        +N LI G+ K  + E+A+++Y  M   GV+PD  T   L  +C+ L  L  G + + +V + G    + + N+L++M+ KC  +  A  IF  ++++++ SW  +I
Sbjct:  205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMI 330          

HSP 3 Score: 68.9366 bits (167), Expect = 3.598e-11
Identity = 36/126 (28.57%), Postives = 68/126 (53.97%), Query Frame = 3
Query:  420 GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            G +D +  +F  ++E     +N++I G V+  + ++AL L+ EM     +PD  T      AC++L AL  G+ IH ++ K     ++ +  SL++MY KC  +  A ++F  +  ++  ++ AII
Sbjct:  337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.979e-27
Identity = 59/171 (34.50%), Postives = 104/171 (60.82%), Query Frame = 3
Query:  291 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFK--QMDQKSVASWRAII 797
            +++ +  +  + K++HA +L  G  ++ F  + L+   A S +G + +A  +F  +  P  F +N++IRG+ ++  F++AL +Y+ M    V PD FTFP L KAC+ L  L+ G  +H  VF+LGF+ D+FVQN LI +Y KC ++  A  +F+   + ++++ SW AI+
Sbjct:   26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194          

HSP 2 Score: 82.8037 bits (203), Expect = 2.408e-15
Identity = 46/169 (27.22%), Postives = 91/169 (53.85%), Query Frame = 3
Query:  303 TC-KNLEEFKKVHAHVLKWGFFWNP---FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            TC ++L++ + +HA V+K G    P      + + A C     G +  A  +F ++  P    +N++I G+ K+    EA+ +++EM  + V PD  +  +   ACA++ +L++   ++ +V +  +  D+F+ ++LI+M+ KC  VE A  +F +   + V  W A+I
Sbjct:  233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC-----GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396          

HSP 3 Score: 72.7886 bits (177), Expect = 2.492e-12
Identity = 49/173 (28.32%), Postives = 85/173 (49.13%), Query Frame = 3
Query:  294 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA--FDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            +LK C  L   +    VHA V + GF  + F  + L+A  A      +  A ++F  +  P      + +++  + ++ +  EAL ++++M +  V+PD     ++  A   LQ LK+G  IH  V K+G E +  +  SL  MY KC +V  A  +F +M   ++  W A+I
Sbjct:  125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCR--RLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.361e-26
Identity = 61/172 (35.47%), Postives = 98/172 (56.98%), Query Frame = 3
Query:  285 CLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERG-VEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            CL++L +CKNL    ++H   +K+G   + +    L+  CA+S   ++ YA  +     EP AF FN+L+RG+ +  +   ++ ++ EM  +G V PD F+F  + KA    ++L+ G Q+H    K G E  LFV  +LI MYG C  VEFA  +F +M Q ++ +W A+I
Sbjct:    8 CLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI 179          

HSP 2 Score: 70.4774 bits (171), Expect = 1.237e-11
Identity = 38/145 (26.21%), Postives = 72/145 (49.66%), Query Frame = 3
Query:  366 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQK-SVASWRAII 797
            WN   A  + A       G ++ A  IF ++       ++++I G   +  F E+   + E+   G+ P+  +   +  AC++  + + G  +HG V K G+ + + V N+LI+MY +C  V  A  +F+ M +K  + SW ++I
Sbjct:  206 WNVMLAGYIKA-------GELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMI 343          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 8.822e-26
Identity = 58/171 (33.92%), Postives = 98/171 (57.31%), Query Frame = 3
Query:  288 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            L+ L+ C++L E  ++H  ++K     N    S L+  C       ++ YA S+F  ID P  + +NS+IRG+      ++AL  Y EM  +G  PD+FTFP + KAC+ L+ ++ G  +HG V K GFE +++V   L++MY  C +V +   +F+ + Q +V +W ++I
Sbjct:   10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLI 180          

HSP 2 Score: 85.8853 bits (211), Expect = 2.845e-16
Identity = 54/182 (29.67%), Postives = 90/182 (49.45%), Query Frame = 3
Query:  294 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFE--------YDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            +LK C  L + +    VH  V+K GF  N +     V+TC L  +   G ++Y   +F  I +     + SLI GFV + +F +A+  + EM   GV+ +      L  AC + + +  G   HG +  LGF+        +++ +  SLI+MY KC  +  A  +F  M ++++ SW +II
Sbjct:  113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMY-----VSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSII 289          

HSP 3 Score: 73.9442 bits (180), Expect = 1.119e-12
Identity = 48/172 (27.91%), Postives = 84/172 (48.84%), Query Frame = 3
Query:  306 CKNLEEFKKVHAHVLKWGFFWNPFCASN-----LVATCALSHW---GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            CK++   K  H  +   GF  +P+  S      ++AT  +  +   G +  A  +F  + E     +NS+I G+ ++   EEAL ++ +M + G+ PD  TF ++ +A       + G  IH +V K GF  D  +  +L+NMY K    E A   F+ +++K   +W  +I
Sbjct:  221 CKDIVTGKWFHGFLQGLGF--DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVI 390          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.378e-25
Identity = 57/171 (33.33%), Postives = 100/171 (58.48%), Query Frame = 3
Query:  288 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMF-ERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            +++++ C +L + K+ H H+++ G F +P+ AS L A  ALS + S++YA  +F +I +P +F +N+LIR +        +++ + +M  E    P+ +TFP L KA A++ +L  G  +HG   K     D+FV NSLI+ Y  C  ++ A  +F  + +K V SW ++I
Sbjct:   34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMI 204          

HSP 2 Score: 83.9593 bits (206), Expect = 1.081e-15
Identity = 46/157 (29.30%), Postives = 84/157 (53.50%), Query Frame = 3
Query:  327 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            + +H   +K     + F A++L+  C  S  G +D AC +F  I E     +NS+I GFV+    ++AL L+ +M    V+  H T   +  ACAK++ L+ G Q+  ++ +     +L + N++++MY KC  +E A  +F  M++K   +W  ++
Sbjct:  151 QSLHGMAVKSAVGSDVFVANSLIH-CYFS-CGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 305          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP321_ARATH (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 9.754e-25
Identity = 68/194 (35.05%), Postives = 100/194 (51.55%), Query Frame = 3
Query:  261 NLRLKEQECLTILKTC--------------KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            NLRL ++E L  +  C              K+L E ++ HA +LK G F + F AS LVA  A +    ++ YA SI  +I  P  F  NS+IR +      E AL ++ EM    V PD ++F  + KACA     +EG QIHG   K G   D+FV+N+L+N+YG+    E A  +  +M  +   SW +++
Sbjct:   20 NLRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 213          

HSP 2 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 41/153 (26.80%), Postives = 78/153 (50.98%), Query Frame = 3
Query:  342 HVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVE-PDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            +V  W F  + + A+ LV             A  +F  +       +N+++  +     + E L ++N+M +   E PD FT  ++  ACA L +L +G  +H ++ K G E + F+  +L++MY KC K++ A  +F+   ++ V++W +II
Sbjct:  236 NVESWNFMISGYAAAGLVKE-----------AKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSII 377          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP188_ARATH (Pentatricopeptide repeat-containing protein At2g36730 OS=Arabidopsis thaliana GN=PCMP-E44 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.274e-24
Identity = 56/175 (32.00%), Postives = 97/175 (55.43%), Query Frame = 3
Query:  273 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            ++ +CL  LK C +++   ++H  +       + F  S LV   +LS    + +A ++     +     +N L RG+       E++++Y+EM  RG++P+  TFP L KACA    L  G QI   V K GF++D++V N+LI++YG C+K   A  +F +M +++V SW +I+
Sbjct:   12 RKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIM 186          
The following BLAST results are available for this feature:
BLAST of CF838549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
PPR68_ARATH8.181e-5653.57Pentatricopeptide repeat-containing protein At1g31... [more]
PPR21_ARATH3.827e-2937.85Pentatricopeptide repeat-containing protein At1g08... [more]
PP249_ARATH1.454e-2835.15Pentatricopeptide repeat-containing protein At3g22... [more]
PP169_ARATH1.608e-2736.99Pentatricopeptide repeat-containing protein At2g22... [more]
PP224_ARATH7.979e-2734.50Pentatricopeptide repeat-containing protein At3g12... [more]
PP122_ARATH1.361e-2635.47Pentatricopeptide repeat-containing protein At1g74... [more]
PP214_ARATH8.822e-2633.92Putative pentatricopeptide repeat-containing prote... [more]
PP175_ARATH4.378e-2533.33Pentatricopeptide repeat-containing protein At2g29... [more]
PP321_ARATH9.754e-2535.05Pentatricopeptide repeat-containing protein At4g18... [more]
PP188_ARATH1.274e-2432.00Pentatricopeptide repeat-containing protein At2g36... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06O11_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838549 ID=CF838549; Name=CF838549; organism=Citrus sinensis; type=EST; length=797bp
CTGACATACTTTCTTCTGGCTGAAATTCTTTCTCAATTCTCATGGATGAC
ATTCCATTCTTTCTCAAAGTCATGTACTTTTCATGCTCCTTCAGTTCTTC
CCATTTCACTAAAACTTGCAGTTGATTGATGCTTTGCCGAGAACAACAAT
CTTGATTGATAAATAATGGTGTGGATAGCAGCAGCATGACTAGGACGTCT
GTCCTTCACCAGTCCCTTCTCTTGACACAACCTGAAGAACCACCAAAAGG
CCCTGAGCTCAATCTGAGGTTGAAGGAACAAGAATGTTTAACAATATTGA
AGACATGCAAGAACCTGGAAGAATTCAAGAAAGTTCATGCCCATGTCCTG
AAATGGGGTTTCTTTTGGAACCCTTTTTGTGCAAGCAATCTTGTGGCAAC
TTGTGCTCTCTCACACTGGGGCAGCATGGACTACGCCTGCTCAATTTTTC
GACAAATCGATGAACCAGGTGCTTTTGATTTCAATTCTTTGATTAGAGGA
TTTGTTAAGGATGTAAAGTTTGAGGAAGCTTTGTTTCTTTATAATGAGAT
GTTTGAGAGAGGAGTGGAACCTGATCATTTCACATTTCCAGCCCTTTTCA
AGGCATGTGCTAAGTTACAAGCATTGAAAGAGGGAATGCAAATTCATGGG
CATGTATTTAAGCTGGGATTTGAATATGATTTGTTTGTACAGAATTCTTT
AATCAATATGTATGGCAAGTGTGAGAAGGTAGAGTTTGCTTCTGCTATTT
TTAAGCAAATGGATCAAAAGAGTGTTGCTTCTTGGAGGGCTATCATT
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