CF838834

Overview
NameCF838834
Unique NameCF838834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838834 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.150e-45
Identity = 89/112 (79.46%), Postives = 100/112 (89.29%), Query Frame = 3
Query:   69 FLVFVSE---IQAKLPAVIVFGDSSVDAGNNNFIPTVARSNFQPYGRDFNGGRATGRFSNGKIATDFISEALGVKPTIPAYLDPAYNISDFATGVTFASAATGYDNATSNVL 395
            FL+ +S       K+PA+IVFGDSSVDAGNNN+IPTVARSNF+PYGRDF GG+ TGRF NGKIATDF+SEALG+KP IPAYLDP+YNISDFATGVTFASAATGYDNATS+VL
Sbjct:   12 FLIAMSSTVTFAGKIPAIIVFGDSSVDAGNNNYIPTVARSNFEPYGRDFVGGKPTGRFCNGKIATDFMSEALGLKPIIPAYLDPSYNISDFATGVTFASAATGYDNATSDVL 123          
BLAST of CF838834 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.850e-43
Identity = 86/123 (69.92%), Postives = 103/123 (83.74%), Query Frame = 3
Query:   30 MAYAYLIWFLLCQFLV-FVSEIQAKLPAVIVFGDSSVDAGNNNFIPTVARSNFQPYGRDFNGGRATGRFSNGKIATDFISEALGVKPTIPAYLDPAYNISDFATGVTFASAATGYDNATSNVL 395
            MA  YL   +LC  L   VS   AK+PA+IVFGDSSVD+GNNNFI T+AR+NF+PYGRDF GGRATGRF NG++++DF SEA G+KPT+PAYLDP+YNISDFATGV FASA TGYDN+T++VL
Sbjct:    1 MATHYLSPSILCIILTTLVSIAGAKIPAIIVFGDSSVDSGNNNFISTMARANFEPYGRDFPGGRATGRFCNGRLSSDFTSEAYGLKPTVPAYLDPSYNISDFATGVCFASAGTGYDNSTADVL 123          
BLAST of CF838834 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.159e-39
Identity = 86/130 (66.15%), Postives = 101/130 (77.69%), Query Frame = 3
Query:   21 KKKMAYAYLIWFLLCQFLVFVSEIQAKLPAVIVFGDSSVDAGNNNFIPTVARSNFQPYGRDFNGGRATGRFSNGKIATDFISEALGVKPTIPAYLDPAYNISDFATGVTFASAATGYDNATSNVLVSVEP 410
            ++    A+L+  L  Q LV + E  AK PA+IVFGDS+VD+GNNN I TV +SNFQPYGRD+  G+ATGRFSNG+IA DFISE LG+K  +PAYLDPAYNI+DFATGV FASA TG DNATS VL SV P
Sbjct:    2 QRNRVLAFLL--LAAQLLVKIPETCAKFPALIVFGDSTVDSGNNNQISTVLKSNFQPYGRDYFDGKATGRFSNGRIAPDFISEGLGLKNAVPAYLDPAYNIADFATGVCFASAGTGLDNATSAVL-SVMP 128          
BLAST of CF838834 vs. ExPASy Swiss-Prot
Match: GDL1_ARATH (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27
Identity = 56/106 (52.83%), Postives = 77/106 (72.64%), Query Frame = 3
Query:   69 FLVFVSEIQAKL-PAVIVFGDSSVDAGNNNFIPTVARSNFQPYGRDFNGGRATGRFSNGKIATDFISEALGVKPTIPAYLDPAYNISDFATGVTFASAATGYDNAT 383
            +++ V+ +   + PA++VFGDS++D GNNN+I T  R+NF PYG +F G  ATGRFSNGK+  DFI+  +G+K T+P +LDP  + SD  TGV FASA +GYDN T
Sbjct:   23 YVINVTNVNVSMFPAILVFGDSTIDTGNNNYIKTYIRANFPPYGCNFPGHNATGRFSNGKLIPDFIASLMGIKDTVPPFLDPHLSDSDIITGVCFASAGSGYDNLT 128          
BLAST of CF838834 vs. ExPASy Swiss-Prot
Match: GDL56_ARATH (GDSL esterase/lipase At3g43570 OS=Arabidopsis thaliana GN=At3g43570 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.598e-27
Identity = 56/121 (46.28%), Postives = 82/121 (67.77%), Query Frame = 3
Query:   45 LIWFLLCQFLVFVSEIQ----AKLPAVIVFGDSSVDAGNNNFIPTVARSNFQPYGRDFNGGRATGRFSNGKIATDFISEALGVKPTIPAYLDPAYNISDFATGVTFASAATGYDNATSNVL 395
            +IW  L   +V  + ++    A +PA+IVFGDS +D GNNN +PT+ + NF PYG+D+ GG ATGRFS+G++ +D I+E +G+  T+PAY++P     D   GVTFAS  TGYD  T+ ++
Sbjct:    5 IIWLTLVLIVVEANAVKQGKNATIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKIGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIM 125          
BLAST of CF838834 vs. ExPASy Swiss-Prot
Match: GDL47_ARATH (GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana GN=At2g40250 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.507e-26
Identity = 61/128 (47.66%), Postives = 86/128 (67.19%), Query Frame = 3
Query:   24 KKMAYAYLIWFLLCQFLVFVSEIQAK-LPAVIVFGDSSVDAGNNNFIPTVARSNFQPYGRDFNGGRATGRFSNGKIATDFISEALGVKPTIPAYLDPAYNISDFATGVTFASAATGYDNATSNVLVSV 404
            K M   +LI  LL Q L   +   +  + A+  FGDS+VD+GNNN+IPT+ +SN  PYG+ F    +TGRFS+GK+ATDFI  +LG+KPT+PAYL+P+    D  TGV+FASA  G D+ T+   +++
Sbjct:    7 KPMFVTFLINILLLQLLNLTNASPSPPITALYAFGDSTVDSGNNNYIPTLFQSNHPPYGKSFPSKLSTGRFSDGKLATDFIVSSLGLKPTLPAYLNPSVKPVDLLTGVSFASAGGGLDDRTAKSSLTI 134          
BLAST of CF838834 vs. ExPASy Swiss-Prot
Match: GDL52_ARATH (GDSL esterase/lipase At3g14820 OS=Arabidopsis thaliana GN=At3g14820 PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.275e-26
Identity = 59/120 (49.17%), Postives = 77/120 (64.17%), Query Frame = 3
Query:   42 YLIWFLLCQFLVFVSE--IQAKLPAVIVFGDSSVDAGNNNFIPTVARSNFQPYGRDFNGGRATGRFSNGKIATDFISEALGVKPTIPAYLDPAYNISDFATGVTFASAATGYDNATSNVL 395
            +L+WF + Q     +   I   +PA+IVFGDS +D GNNN IPT+ +SNF PYGRDF G   TGRFS+GK+ +D I+E+LG+  T+P YL       D   GV FAS  +GYD  TS +L
Sbjct:    8 FLLWFFVVQVTTSSAHRNITTTIPALIVFGDSIMDTGNNNDIPTLLKSNFPPYGRDFPGAIPTGRFSDGKVPSDIIAESLGIAKTLPPYLGSNLKPHDLLKGVIFASGGSGYDPLTSTLL 127          
BLAST of CF838834 vs. ExPASy Swiss-Prot
Match: GDL26_ARATH (GDSL esterase/lipase At1g59030/At1g59406 OS=Arabidopsis thaliana GN=At1g59030 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.277e-26
Identity = 58/125 (46.40%), Postives = 83/125 (66.40%), Query Frame = 3
Query:   30 MAYAYLIWFLLCQFLVFVSEIQAK---LPAVIVFGDSSVDAGNNNFIPTVARSNFQPYGRDFNGGRATGRFSNGKIATDFISEALGVKPTIPAYLDPAYNISDFATGVTFASAATGYDNATSNVL 395
            M    L++ L+  F+   +  Q K   +PA+IVFGDS +D GNNN +PT+ + NF PYG+D+ GG ATGRFS+G++ +D I+E LG+  T+PAY++P     D   GVTFAS  TGYD  T+ ++
Sbjct:    1 MKIQILLFALVLIFVEANAATQGKNTTIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIM 125          
BLAST of CF838834 vs. ExPASy Swiss-Prot
Match: GDL25_ARATH (GDSL esterase/lipase At1g58725 OS=Arabidopsis thaliana GN=At1g58725 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.277e-26
Identity = 58/125 (46.40%), Postives = 83/125 (66.40%), Query Frame = 3
Query:   30 MAYAYLIWFLLCQFLVFVSEIQAK---LPAVIVFGDSSVDAGNNNFIPTVARSNFQPYGRDFNGGRATGRFSNGKIATDFISEALGVKPTIPAYLDPAYNISDFATGVTFASAATGYDNATSNVL 395
            M    L++ L+  F+   +  Q K   +PA+IVFGDS +D GNNN +PT+ + NF PYG+D+ GG ATGRFS+G++ +D I+E LG+  T+PAY++P     D   GVTFAS  TGYD  T+ ++
Sbjct:    1 MKIQILLFALVLIFVEANAATQGKNTTIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIM 125          
BLAST of CF838834 vs. ExPASy Swiss-Prot
Match: GDL55_ARATH (GDSL esterase/lipase At3g43550 OS=Arabidopsis thaliana GN=At3g43550 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 7.295e-26
Identity = 56/121 (46.28%), Postives = 79/121 (65.29%), Query Frame = 3
Query:   45 LIWFLLCQFLVFVSEIQ----AKLPAVIVFGDSSVDAGNNNFIPTVARSNFQPYGRDFNGGRATGRFSNGKIATDFISEALGVKPTIPAYLDPAYNISDFATGVTFASAATGYDNATSNVL 395
            +IW  L    V    ++      +PA+IVFGDS +D GNNN +PT+ + NF PYG+D+ GG ATGRFS+G++ +D I+E LG+  T+PAY++P     D   GVTFAS  TGYD  T+ ++
Sbjct:    5 IIWLALVLIAVETYAVKQGKNVTIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLVKTLPAYMNPYLKPHDLLKGVTFASGGTGYDPLTAKIM 125          
The following BLAST results are available for this feature:
BLAST of CF838834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
GDL34_ARATH3.150e-4579.46GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL48_ARATH3.850e-4369.92GDSL esterase/lipase At2g42990 OS=Arabidopsis thal... [more]
GDL66_ARATH1.159e-3966.15GDSL esterase/lipase At4g26790 OS=Arabidopsis thal... [more]
GDL1_ARATH1.736e-2752.83GDSL esterase/lipase At1g06990 OS=Arabidopsis thal... [more]
GDL56_ARATH6.598e-2746.28GDSL esterase/lipase At3g43570 OS=Arabidopsis thal... [more]
GDL47_ARATH2.507e-2647.66GDSL esterase/lipase At2g40250 OS=Arabidopsis thal... [more]
GDL52_ARATH3.275e-2649.17GDSL esterase/lipase At3g14820 OS=Arabidopsis thal... [more]
GDL26_ARATH4.277e-2646.40GDSL esterase/lipase At1g59030/At1g59406 OS=Arabid... [more]
GDL25_ARATH4.277e-2646.40GDSL esterase/lipase At1g58725 OS=Arabidopsis thal... [more]
GDL55_ARATH7.295e-2646.28GDSL esterase/lipase At3g43550 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06L20_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06L20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838834 ID=CF838834; Name=CF838834; organism=Citrus sinensis; type=EST; length=834bp
GCAAGAGAGACACTATGAAAAAAAAAAAAATGGCTTACGCATACCTCATA
TGGTTCCTTTTATGTCAGTTTCTTGTGTTTGTTTCCGAAATTCAAGCAAA
ACTTCCAGCAGTGATCGTGTTTGGAGACTCATCAGTTGATGCGGGAAACA
ATAATTTTATTCCTACGGTTGCAAGGAGCAATTTTCAGCCGTATGGTCGT
GATTTTAACGGTGGCCGTGCCACCGGAAGGTTCTCTAATGGAAAAATTGC
TACTGATTTTATTTCTGAGGCCTTAGGTGTCAAGCCAACGATTCCTGCTT
ACTTGGATCCTGCATATAATATCTCAGATTTTGCCACTGGTGTTACGTTT
GCTTCTGCTGCAACCGGCTATGATAATGCCACTTCTAATGTACTTGTAAG
TGTAGAGCCAATATTAATTACACTGTTGCTTCATACAAATATTTAGGTAC
TGGCCAACTATCATAGCCAATTTGTACACATTGATCTTCATAGTCTTCTA
TCTTCGTTAGGTTTCTATTTTTCTCTTTTGGGCTTGTTCCATATGTGAAG
CTTTTTAATATTCGTTTAAATTTGTTCGCGCAAGGGCTAATTGCTTTTAG
ATCAAACGTCCAATATTATCAATAACTTTTAAATTTGTTATTAATGATTT
GCATTGTGTCTGGTTAATTCACAGCTTTAATACAGAATAGGTGCAATTAT
TGATCGGCGATATTGCTCACTGAACAATTTTTTATTTTCGGATAATAGCT
GTAAATTAAAGTGATTTTCCTGTCTTATTTTTTGGCTTGTAGGCTGTGAT
ACCTTTGTGGAAGGAGCTGGAGTACTACAAGGAT
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