CF838841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838841 vs. ExPASy Swiss-Prot
Match: GDIA_PANTR (Rab GDP dissociation inhibitor alpha OS=Pan troglodytes GN=GDI1 PE=2 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 5.958e-88 Identity = 159/248 (64.11%), Postives = 201/248 (81.05%), Query Frame = 3 Query: 39 MDEEYHVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFKGNEQPPAHLGSSRDYNVDMIPKFIIANGALVHVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPSTDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTIELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGG 779 MDEEY VIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV +L++T+VT+YL FK V+GSFVY GK++KVPST+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + ++ K+ L + IDF GHALAL+R D YL++P L+TV R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGG Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGG 247
BLAST of CF838841 vs. ExPASy Swiss-Prot
Match: GDIA_MOUSE (Rab GDP dissociation inhibitor alpha OS=Mus musculus GN=Gdi1 PE=1 SV=3) HSP 1 Score: 323.939 bits (829), Expect = 5.958e-88 Identity = 158/248 (63.71%), Postives = 201/248 (81.05%), Query Frame = 3 Query: 39 MDEEYHVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFKGNEQPPAHLGSSRDYNVDMIPKFIIANGALVHVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPSTDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTIELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGG 779 MDEEY VIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV +L++T+VT+YL FK V+GSFVY GK++KVPST+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + ++ K+ L + IDF GHALAL+R D YL++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGG Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQILEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGG 247
BLAST of CF838841 vs. ExPASy Swiss-Prot
Match: GDIA_HUMAN (Rab GDP dissociation inhibitor alpha OS=Homo sapiens GN=GDI1 PE=1 SV=2) HSP 1 Score: 323.939 bits (829), Expect = 5.958e-88 Identity = 159/248 (64.11%), Postives = 201/248 (81.05%), Query Frame = 3 Query: 39 MDEEYHVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFKGNEQPPAHLGSSRDYNVDMIPKFIIANGALVHVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPSTDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTIELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGG 779 MDEEY VIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV +L++T+VT+YL FK V+GSFVY GK++KVPST+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + ++ K+ L + IDF GHALAL+R D YL++P L+TV R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGG Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGG 247
BLAST of CF838841 vs. ExPASy Swiss-Prot
Match: GDIA_RAT (Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus GN=Gdi1 PE=1 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.781e-88 Identity = 158/248 (63.71%), Postives = 201/248 (81.05%), Query Frame = 3 Query: 39 MDEEYHVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFKGNEQPPAHLGSSRDYNVDMIPKFIIANGALVHVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPSTDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTIELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGG 779 MDEEY VIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV +L++T+VT+YL FK V+GSFVY GK++KVPST+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + ++ K+ L + IDF GHALAL+R D YL++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGG Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGG 247
BLAST of CF838841 vs. ExPASy Swiss-Prot
Match: GDIA_PONPY (Rab GDP dissociation inhibitor alpha OS=Pongo pygmaeus GN=GDI1 PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.781e-88 Identity = 158/248 (63.71%), Postives = 201/248 (81.05%), Query Frame = 3 Query: 39 MDEEYHVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFKGNEQPPAHLGSSRDYNVDMIPKFIIANGALVHVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPSTDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTIELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGG 779 MDEEY VIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV +L++T+VT+YL FK V+GSFVY GK++KVPST+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + ++ K+ L + IDF GHALAL+R D YL++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGG Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGG 247
BLAST of CF838841 vs. ExPASy Swiss-Prot
Match: GDIA_MACFA (Rab GDP dissociation inhibitor alpha OS=Macaca fascicularis GN=GDI1 PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.781e-88 Identity = 158/248 (63.71%), Postives = 201/248 (81.05%), Query Frame = 3 Query: 39 MDEEYHVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFKGNEQPPAHLGSSRDYNVDMIPKFIIANGALVHVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPSTDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTIELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGG 779 MDEEY VIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV +L++T+VT+YL FK V+GSFVY GK++KVPST+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + ++ K+ L + IDF GHALAL+R D YL++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGG Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGG 247
BLAST of CF838841 vs. ExPASy Swiss-Prot
Match: GDIA_BOVIN (Rab GDP dissociation inhibitor alpha OS=Bos taurus GN=GDI1 PE=1 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.781e-88 Identity = 158/248 (63.71%), Postives = 201/248 (81.05%), Query Frame = 3 Query: 39 MDEEYHVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFKGNEQPPAHLGSSRDYNVDMIPKFIIANGALVHVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPSTDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTIELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGG 779 MDEEY VIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV +L++T+VT+YL FK V+GSFVY GK++KVPST+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + ++ K+ L + IDF GHALAL+R D YL++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGG Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGG 247
BLAST of CF838841 vs. ExPASy Swiss-Prot
Match: GDIA_CANFA (Rab GDP dissociation inhibitor alpha OS=Canis familiaris GN=GDI1 PE=2 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.327e-87 Identity = 157/248 (63.31%), Postives = 201/248 (81.05%), Query Frame = 3 Query: 39 MDEEYHVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFKGNEQPPAHLGSSRDYNVDMIPKFIIANGALVHVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPSTDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTIELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGG 779 MDEEY VIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV +L++T+VT+YL FK V+GSF+Y GK++KVPST+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + ++ K+ L + IDF GHALAL+R D YL++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGG Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPEAMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFIYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQSTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGG 247
BLAST of CF838841 vs. ExPASy Swiss-Prot
Match: GDIB_BOVIN (Rab GDP dissociation inhibitor beta OS=Bos taurus GN=GDI2 PE=2 SV=3) HSP 1 Score: 320.087 bits (819), Expect = 8.603e-87 Identity = 155/248 (62.50%), Postives = 199/248 (80.24%), Query Frame = 3 Query: 39 MDEEYHVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQ-LWKRFKGNEQPPAHLGSSRDYNVDMIPKFIIANGALVHVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPSTDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTIELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGG 779 M+EEY VIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ ++ L+KRFK PPA +G RD+NVD+IPKF++ANG LV +L+ T+VT+YL FK +GSFVY GK++KVPST+ EAL S LMG+FEKRR RKF +YV ++DENDP+T EG+D + + E+ K+ L + IDF GHALAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGG Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGAPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGIDPKKTSMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGG 247
BLAST of CF838841 vs. ExPASy Swiss-Prot
Match: GDIB_PIG (Rab GDP dissociation inhibitor beta OS=Sus scrofa GN=GDI2 PE=2 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 4.270e-86 Identity = 154/248 (62.10%), Postives = 197/248 (79.44%), Query Frame = 3 Query: 39 MDEEYHVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQ-LWKRFKGNEQPPAHLGSSRDYNVDMIPKFIIANGALVHVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPSTDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTIELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGG 779 M+EEY VIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ ++ L+KRF PPA +G RD+NVD+IPKF++ANG LV +L+ T+VT+YL FK +GSFVY GK++KVPST+ EAL S LMG+FEKRR RKF +YV ++DENDP+T EG+D + E+ K+ L + IDF GHALAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGG Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFNIPGAPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGVDPKKTAMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGG 247 The following BLAST results are available for this feature:
BLAST of CF838841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838841 ID=CF838841; Name=CF838841; organism=Citrus sinensis; type=EST; length=781bpback to top |