CK739593

Overview
NameCK739593
Unique NameCK739593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length209
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3716 contig Csv1_Contig3716:1479..1686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739593 vs. ExPASy Swiss-Prot
Match: UGPA_SOLTU (UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 1.004e-23
Identity = 51/61 (83.61%), Postives = 57/61 (93.44%), Query Frame = 1
Query:    4 FLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGP 186
            FL RFKSIPSII+LDSLKVTGDVWFG+ +TLKGKVT+AAKSG KLEIPDGAV+ NK+INGP
Sbjct:  414 FLGRFKSIPSIIDLDSLKVTGDVWFGSGVTLKGKVTVAAKSGVKLEIPDGAVIANKDINGP 474          
BLAST of CK739593 vs. ExPASy Swiss-Prot
Match: UGPA2_ARATH (Probable UTP--glucose-1-phosphate uridylyltransferase 2 OS=Arabidopsis thaliana GN=At3g03250 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.982e-23
Identity = 51/61 (83.61%), Postives = 57/61 (93.44%), Query Frame = 1
Query:    4 FLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGP 186
            FLSRFKSIPSI+ELDSLKV+GDVWFG++I LKGKVT+AAKSG KLEIPD AV+ENK INGP
Sbjct:  406 FLSRFKSIPSIVELDSLKVSGDVWFGSSIVLKGKVTVAAKSGVKLEIPDRAVVENKNINGP 466          
BLAST of CK739593 vs. ExPASy Swiss-Prot
Match: UGPA1_ARATH (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana GN=At5g17310 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.229e-22
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = 1
Query:    4 FLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGP 186
            FLSRFKSIPSI+ELDSLKV+GDVWFG+ + LKGKVT+ A +G KLEIPD AVLENK+INGP
Sbjct:  407 FLSRFKSIPSIVELDSLKVSGDVWFGSGVVLKGKVTVKANAGTKLEIPDNAVLENKDINGP 467          
BLAST of CK739593 vs. ExPASy Swiss-Prot
Match: UGPA_ASTPN (UTP--glucose-1-phosphate uridylyltransferase OS=Astragalus penduliflorus GN=UGP PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.509e-22
Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 1
Query:    4 FLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPR 189
            FL RFKSIPSI+ELDSLKV GDVWFG  + LKGKV+I AKSG K+EIPDGAV+ NKEINGP+
Sbjct:  408 FLGRFKSIPSIVELDSLKVVGDVWFGTGVILKGKVSIVAKSGVKVEIPDGAVIANKEINGPK 469          
BLAST of CK739593 vs. ExPASy Swiss-Prot
Match: UGPA_PYRPY (UTP--glucose-1-phosphate uridylyltransferase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.396e-22
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = 1
Query:    4 FLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGP 186
            +LSRFKSIPSI+EL+SLKV+GDVWFGA + LKGKVTI AKSG KLEIPD AV+ NK+INGP
Sbjct:  408 YLSRFKSIPSILELESLKVSGDVWFGAGVVLKGKVTITAKSGVKLEIPDNAVIANKDINGP 468          
BLAST of CK739593 vs. ExPASy Swiss-Prot
Match: UGPA_MUSAC (UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.396e-22
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 1
Query:    4 FLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGP 186
            FLSRFKSIPSI+ELDSLKV+GDVWFG  + LKG V+IAAKSG KLEI DGAVLENK INGP
Sbjct:  404 FLSRFKSIPSIVELDSLKVSGDVWFGEGVVLKGNVSIAAKSGVKLEISDGAVLENKVINGP 464          
BLAST of CK739593 vs. ExPASy Swiss-Prot
Match: UGPA_HORVU (UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.603e-21
Identity = 49/61 (80.33%), Postives = 56/61 (91.80%), Query Frame = 1
Query:    4 FLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGP 186
            FL+RFKSIPSI+ELDSLKV+GDV FG+ + LKG VTIAAK+G KLEIPDGAVLENK+INGP
Sbjct:  410 FLARFKSIPSIVELDSLKVSGDVSFGSGVVLKGNVTIAAKAGVKLEIPDGAVLENKDINGP 470          
BLAST of CK739593 vs. ExPASy Swiss-Prot
Match: UGPA1_DICDI (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Dictyostelium discoideum GN=uppA PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.453e-14
Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 1
Query:   13 RFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEING 183
            RFKSIP ++ELD L V+GDV+FG+ ITLKG V I A  GE+++IPDG VLENK ++G
Sbjct:  448 RFKSIPDLLELDHLTVSGDVYFGSRITLKGTVIIVANHGERVDIPDGVVLENKVLSG 504          
BLAST of CK739593 vs. ExPASy Swiss-Prot
Match: UGPA_MOUSE (UTP--glucose-1-phosphate uridylyltransferase OS=Mus musculus GN=Ugp2 PE=2 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 2.098e-13
Identity = 34/60 (56.67%), Postives = 47/60 (78.33%), Query Frame = 1
Query:    4 FLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEING 183
            +L RF+SIP ++ELD L V+GDV FG N++LKG V I A  G++++IP GAVLENK ++G
Sbjct:  442 YLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENKIVSG 501          
BLAST of CK739593 vs. ExPASy Swiss-Prot
Match: UGPA_HUMAN (UTP--glucose-1-phosphate uridylyltransferase OS=Homo sapiens GN=UGP2 PE=1 SV=5)

HSP 1 Score: 74.3294 bits (181), Expect = 2.098e-13
Identity = 34/60 (56.67%), Postives = 47/60 (78.33%), Query Frame = 1
Query:    4 FLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEING 183
            +L RF+SIP ++ELD L V+GDV FG N++LKG V I A  G++++IP GAVLENK ++G
Sbjct:  442 YLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENKIVSG 501          
The following BLAST results are available for this feature:
BLAST of CK739593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
UGPA_SOLTU1.004e-2383.61UTP--glucose-1-phosphate uridylyltransferase OS=So... [more]
UGPA2_ARATH4.982e-2383.61Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA1_ARATH3.229e-2278.69UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA_ASTPN5.509e-2277.42UTP--glucose-1-phosphate uridylyltransferase OS=As... [more]
UGPA_PYRPY9.396e-2278.69UTP--glucose-1-phosphate uridylyltransferase OS=Py... [more]
UGPA_MUSAC9.396e-2281.97UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
UGPA_HORVU1.603e-2180.33UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]
UGPA1_DICDI1.453e-1463.16UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA_MOUSE2.098e-1356.67UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
UGPA_HUMAN2.098e-1356.67UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5980 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739593 ID=CK739593; Name=CK739593; organism=Citrus sinensis; type=EST; length=209bp
GGCTTTTTGAGCCGATTCAAGTCTATTCCTAGTATCATCGAGCTTGATAG
CCTTAAGGTGACCGGTGACGTATGGTTTGGTGCTAATATTACCCTCAAGG
GGAAAGTGACTATTGCTGCCAAATCTGGGGAGAAACTGGAAATTCCTGAT
GGAGCTGTACTTGAAAACAAGGAGATCAATGGCCCCCGGGGATCTGTAAG
GAACATGCT
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