CK739596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 8.903e-57 Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 3 Query: 3 FIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 FIVE++ IGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLAD Sbjct: 154 FIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLAD 257
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 1.519e-56 Identity = 96/104 (92.31%), Postives = 101/104 (97.12%), Query Frame = 3 Query: 3 FIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 F++E++ IGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLAD Sbjct: 154 FVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLAD 257
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.290e-20 Identity = 51/104 (49.04%), Postives = 63/104 (60.58%), Query Frame = 3 Query: 3 FIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 F++E I + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + E + KEI NGRLAMLA +G QH TG GP DNL+ H++D Sbjct: 142 FVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGI-FNPLNFA-----PTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISD 239
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.907e-20 Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = 3 Query: 3 FIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 F++E I + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + +E + KE+ NGRLAMLA +G QH TG GP +NL+ HL+D Sbjct: 143 FVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD 240
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.532e-19 Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 3 FIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 F++EM +G+AE RR+ D KPG + K G D YPGG F+PLG+G + +KEL+ KEIKNGRLAMLA++G + Q + TG GP NL+ HLAD Sbjct: 156 FVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDE-KSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLAD 260
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.641e-18 Identity = 48/106 (45.28%), Postives = 68/106 (64.15%), Query Frame = 3 Query: 3 FIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 F++EM +G+AE RR+ D KPG + K G + YPGG +F+PLG+G + +KEL+ KE+KNGRLAMLA++G + Q + TG GP NL+ H+AD Sbjct: 158 FVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDE-KSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVAD 262
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.942e-15 Identity = 47/95 (49.47%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 30 WAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 + E RRW DI PG VN DPIF + L + GYPG + F+PL + +P + KE KE+ NGRLAMLA +G QH G GP +NL HLAD Sbjct: 131 YVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRV-FNPLNF---APLENKE---KELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLAD 218
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.041e-13 Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 117 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP+DNL+ HLAD Sbjct: 187 TDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLAD 250
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.296e-12 Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 3 Query: 129 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNLIAHLAD 314 YPGG FDPLG+ S P K +EL+ KEIKNGRLA+LA++G Q Y GTGP++NL HLAD Sbjct: 168 YPGGA-FDPLGY-SKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLAD 228
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.998e-12 Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 3 Query: 117 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL HLAD Sbjct: 194 TDPIYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 257 The following BLAST results are available for this feature:
BLAST of CK739596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739596 ID=CK739596; Name=CK739596; organism=Citrus sinensis; type=EST; length=319bpback to top |