CK739603

Overview
NameCK739603
Unique NameCK739603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length403
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:324..725. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739603 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 2.515e-35
Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 3
Query:   24 IAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEAPFVSVQILG 221
            +A  LVW+EVEA QFDP +SKL WELV+K +FGM TD   VEENEAKLAK+LDVYEA     + LG
Sbjct:   95 MAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLG 160          

HSP 2 Score: 82.0333 bits (201), Expect = 2.515e-35
Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 1
Query:  196 RLSQSKYL-ACDSFTLVDLHHLPNINLLVGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 384
            RL++S+YL A DSFTLVDLHHLP +  L+GT VKKLF+ R HVSAW   I +RP+W K LAL K
Sbjct:  152 RLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKKLFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of CK739603 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.250e-33
Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 1
Query:  196 RLSQSKYLACDSFTLVDLHHLPNINLLVGTPVKKLFDARPHVSAWAADITSRPAWAKVL 372
            RL +SKYLA D FTLVDLH +P I  L+GTP KKLFD RPHVSAW ADITSRP+  KVL
Sbjct:  150 RLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAQKVL 208          

HSP 2 Score: 73.9442 bits (180), Expect = 2.250e-33
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 3
Query:    3 LTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYE 191
            L   GK +A + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE
Sbjct:   86 LLSTGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYE 148          
BLAST of CK739603 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 3.816e-33
Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 1
Query:  196 RLSQSKYLACDSFTLVDLHHLPNINLLVGTPVKKLFDARPHVSAWAADITSRPAWAKVL 372
            RL +SKYLA D FTLVDLH +P I  L+GTP KKLFD RPHVSAW ADITSRP+  KVL
Sbjct:  151 RLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAKKVL 209          

HSP 2 Score: 72.7886 bits (177), Expect = 3.816e-33
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 3
Query:   18 KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYE 191
            K IA + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE
Sbjct:   92 KDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYE 149          
BLAST of CK739603 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 1.178e-31
Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 1
Query:  196 RLSQSKYLACDSFTLVDLHHLPNINLLVGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 384
            RL++S++LA DSFTL DLHHLP I+ L+GT  K LFD+RP VS W   I++RPAWAKV+ L K
Sbjct:  200 RLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKVLFDSRPKVSEWIKKISARPAWAKVIDLQK 262          

HSP 2 Score: 75.485 bits (184), Expect = 1.178e-31
Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 3
Query:   39 VWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEAPFVSVQIL 218
            VW +VE  QFDP +SKL +E V+K MFGMTTDPAAV+E E KL K+LDVYEA     + L
Sbjct:  148 VWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFL 207          
BLAST of CK739603 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.684e-27
Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 1
Query:  196 RLSQSKYLACDSFTLVDLHHLPNINLLVGTPVKKLFDARPHVSAWAADITSRPAWAKVL 372
            RL + KYLA ++FTL DLHH+P I  L+GTP KKLF  RP V+ W A+IT RPA  KVL
Sbjct:  154 RLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKVL 212          

HSP 2 Score: 65.855 bits (159), Expect = 2.684e-27
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 3
Query:   48 EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEA 194
            +VEA QFDP +SKL WE V+K  +G+ TD A V E EAKLAK+LDVYEA
Sbjct:  105 QVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEA 153          
BLAST of CK739603 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 1.701e-26
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 1
Query:  196 RLSQSKYLACDSFTLVDLHHLPNINLLVGTPVKKLFDARPHVSAWAADITSRPAWAKV 369
            RL + KYLA ++FTL DLHH+P I  L+GTP KKLF  RP V+ W A+IT RPA  KV
Sbjct:  154 RLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKV 211          

HSP 2 Score: 64.3142 bits (155), Expect = 1.701e-26
Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 3
Query:   27 APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEA 194
            A + +  +VE  QFDP +SKL +E ++K ++G+TTD A V E EAKLAK+LDVYEA
Sbjct:   98 AIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEA 153          
BLAST of CK739603 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.757e-18
Identity = 44/80 (55.00%), Postives = 57/80 (71.25%), Query Frame = 1
Query:  145 LKKMKLSLPKF*MFTRPRLSQSKYLACDSFTLVDLHHLPNINLLVGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 384
            +K+ ++ L K       RL++SKYL  DSFTLVDLHH+PNI  L+ T VK++FD+RP VSAW ADI +RPAW K L  L+
Sbjct:  133 VKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          

HSP 2 Score: 71.2478 bits (173), Expect = 1.754e-12
Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 3
Query:   18 KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEAPFVSVQILG 221
            K +  + VW EVE  +F+P +SKL WEL  KP+ GMTTD  AV+E+E +L+K+LD+YE      + LG
Sbjct:   91 KKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLG 158          
BLAST of CK739603 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.409e-18
Identity = 40/59 (67.80%), Postives = 46/59 (77.97%), Query Frame = 1
Query:  196 RLSQSKYLACDSFTLVDLHHLPNINLLVGTPVKKLFDARPHVSAWAADITSRPAWAKVL 372
            RL  SKYL  DSFTL DLHH P +N L+GT VK LFD+RPHVSAW ADI +RPAW+K +
Sbjct:  150 RLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRPHVSAWCADILARPAWSKAI 208          

HSP 2 Score: 77.411 bits (189), Expect = 2.448e-14
Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 3
Query:   18 KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEAPFVSVQILGVRQLHLGRFASSPQY*FVGG 281
            K +A + VW EVE+ +FDP +SKL +E+V KPM GM TD AAV ENE KL K+LDVYE+     + LG     L     +P   ++ G
Sbjct:   91 KKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMG 178          
BLAST of CK739603 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.425e-17
Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 1
Query:  145 LKKMKLSLPKF*MFTRPRLSQSKYLACDSFTLVDLHHLPNINLLVGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 384
            +K+ +  L K       +L++SKYL  DSFTLVDLHH+PNI  L+ + VK++FD+RP VSAW ADI +RPAW K L  L+
Sbjct:  133 VKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          

HSP 2 Score: 78.5666 bits (192), Expect = 1.099e-14
Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 3
Query:   18 KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEAPFVSVQILG 221
            K +  + VW EVE  +F+PP++KL WEL  KP+ GMTTD AAV+E+EA+L+K+LD+YE      + LG
Sbjct:   91 KKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLG 158          
BLAST of CK739603 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 5.817e-15
Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 1
Query:  196 RLSQSKYLACDSFTLVDLHHLPNINLLVGTPVKKLFDARPHVSAWAADITSRPAWAKVLALL 381
            RLSQS YLA D  +  DL+H P     +GTP   LFD+ PHV AW   + +RP+  K+ A++
Sbjct:  153 RLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVM 214          

HSP 2 Score: 42.743 bits (99), Expect = 5.817e-15
Identity = 22/53 (41.51%), Postives = 33/53 (62.26%), Query Frame = 3
Query:   39 VWKEVEALQFDPPSSKLNWELVYKP-MFGMTTDPAAVEENEAKLAKILDVYEA 194
            VW EVE  Q++   S + +E +  P M G+ T+   V+E+  KL K+L+VYEA
Sbjct:  100 VWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEA 152          
The following BLAST results are available for this feature:
BLAST of CK739603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
GSTF_SILCU2.515e-3565.15Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF1_ARATH2.250e-3372.88Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GST11_ARATH3.816e-3372.88Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF6_ARATH1.178e-3161.90Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GST16_ARATH2.684e-2761.02Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF4_ARATH1.701e-2660.34Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF2_TOBAC3.757e-1855.00Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF_HYOMU6.409e-1867.80Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF1_TOBAC5.425e-1752.50Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF1_ORYSJ5.817e-1545.16Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5990 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739603 ID=CK739603; Name=CK739603; organism=Citrus sinensis; type=EST; length=403bp
AGTTAACATGCCCAGGCAAGCCCATCGCCCCGTTATTGGTATGGAAGGAG
GTGGAGGCACTCCAGTTCGACCCCCCATCATCGAAGCTCAACTGGGAGCT
CGTGTACAAGCCAATGTTTGGAATGACCACTGATCCAGCTGCGGTTGAAG
AAAATGAAGCTAAGCTTGCCAAAATTTTAGATGTTTACGAGGCCCCGTTT
GTCTCAGTCCAAATACTTGGCGTGCGACAGCTTCACCTTGGTCGATTTGC
ATCATCTCCCCAATATTAATTTGTTGGTGGGGACGCCTGTCAAGAAGCTG
TTTGATGCACGCCCCCATGTTAGCGCATGGGCAGCTGATATCACTTCCAG
ACCGGCTTGGGCTAAGGTCCTTGCCTTGCTCAAACACTGAACACTCTGCC
CGC
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