CK739609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739609 vs. ExPASy Swiss-Prot
Match: RL36_DAUCA (60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 1.114e-30 Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 3 Query: 33 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 239 MAPKQPNTGLFVGLNKGHIVTKKEL PRP+DRKGKTSKR HFVR +IREVAGF PYEKRITELLKVGKD Sbjct: 1 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKD 69
BLAST of CK739609 vs. ExPASy Swiss-Prot
Match: RL362_ARATH (60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.544e-23 Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = 3 Query: 33 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 239 M Q TGLFVGLNKGH+VT++EL PRP RKGKTSKR F+R +I+EVAG APYEKRITELLKVGKD Sbjct: 1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKD 69
BLAST of CK739609 vs. ExPASy Swiss-Prot
Match: RL363_ARATH (60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.547e-23 Identity = 50/62 (80.65%), Postives = 56/62 (90.32%), Query Frame = 3 Query: 54 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 239 TGLFVGLNKGH+VTK+E PPRP +RKGKTSKR F+R +I+EVAG APYEKRITELLKVGKD Sbjct: 4 TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKD 65
BLAST of CK739609 vs. ExPASy Swiss-Prot
Match: RL361_ARATH (60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.116e-22 Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = 3 Query: 54 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 239 TGLFVGLNKGH+VT++EL PRP RKGKTSKR F+R +IREVAG APYEKRITELLKVGKD Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKD 69
BLAST of CK739609 vs. ExPASy Swiss-Prot
Match: RL36A_SCHPO (60S ribosomal protein L36-A OS=Schizosaccharomyces pombe GN=rpl36a PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.561e-16 Identity = 37/61 (60.66%), Postives = 51/61 (83.61%), Query Frame = 3 Query: 57 GLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 239 GL VGLNKG ++TK++LP RP+ RKG+ SKR FVR+++REVAGFAPYE+R+ EL++ +D Sbjct: 4 GLVVGLNKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQD 64
BLAST of CK739609 vs. ExPASy Swiss-Prot
Match: RL36_ENTCP (60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.012e-15 Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = 3 Query: 66 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 239 VGLNKGH VTKK PRP+ RKG S+RV VR V+REVAG+APYE+R+ ELLKVGKD Sbjct: 6 VGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKD 63
BLAST of CK739609 vs. ExPASy Swiss-Prot
Match: RL36B_SCHPO (60S ribosomal protein L36-B OS=Schizosaccharomyces pombe GN=rpl36b PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.012e-15 Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 3 Query: 57 GLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 239 GL VGLNKG +TK++LP RP+ RKG SKR FVR+++REVAGFAPYE+R+ EL++ +D Sbjct: 4 GLVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQD 64
BLAST of CK739609 vs. ExPASy Swiss-Prot
Match: RL36_IXOSC (60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.119e-14 Identity = 39/60 (65.00%), Postives = 43/60 (71.67%), Query Frame = 3 Query: 60 LFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 239 L VGL KGH VTK E PRP+ RKG SK FVR +IREV GFAP+E+R ELLKV KD Sbjct: 7 LAVGLGKGHKVTKNEYKPRPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKD 66
BLAST of CK739609 vs. ExPASy Swiss-Prot
Match: RL36_TRIHM (60S ribosomal protein L36 OS=Trichoderma hamatum GN=rpl36 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.616e-13 Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 3 Query: 33 MAPKQP-NTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 239 MA + P TGL VGLNKGH T + + PR + KG SKR FVR V++EVAG APYE+R+ ELL+ KD Sbjct: 1 MAKEAPAKTGLAVGLNKGHKTTARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYERRVIELLRNSKD 70
BLAST of CK739609 vs. ExPASy Swiss-Prot
Match: RL36_XENTR (60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.599e-13 Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 3 Query: 66 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 239 VGLNKGH VTK PR R+G+ +K FVR +IREV GFAPYE+R ELLKV KD Sbjct: 9 VGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKD 66 The following BLAST results are available for this feature:
BLAST of CK739609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739609 ID=CK739609; Name=CK739609; organism=Citrus sinensis; type=EST; length=240bpback to top |