CK739614

Overview
NameCK739614
Unique NameCK739614
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length385
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7835 contig Csv1_Contig7835:328..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.358e-27
Identity = 66/107 (61.68%), Postives = 73/107 (68.22%), Query Frame = 2
Query:   62 NLPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            NLPDGKVERLYGLAPVCKF   K     +  +     + +    +    K   L+ GIPFNKAYGM AF+YHG D RFNKIFN GMS HSTITMKKILE YKGFEGL
Sbjct:   97 NLPDGKVERLYGLAPVCKFLV-KNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGL 202          

HSP 2 Score: 71.633 bits (174), Expect = 1.370e-12
Identity = 42/77 (54.55%), Postives = 51/77 (66.23%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDRI RLLASYSVL C+LR  P  +  E L+    +    +K +  +      LMNQDK+LMESWYYLKDAVLEGG
Sbjct:   77 MLDRIFRLLASYSVLTCTLRNLPDGKV-ERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGG 152          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.177e-26
Identity = 64/107 (59.81%), Postives = 72/107 (67.29%), Query Frame = 2
Query:   62 NLPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            +LPDGKVERLYGLAPVCKF   K     +        + +    +    K   L+ GIPFNKAYGM AF+YHG D RFNK+FN GMS HSTITMKKILE YKGFEGL
Sbjct:   96 DLPDGKVERLYGLAPVCKFLT-KNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGL 201          

HSP 2 Score: 75.0998 bits (183), Expect = 1.239e-13
Identity = 43/77 (55.84%), Postives = 50/77 (64.94%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDRILRLLASYS+L CSL+  P  +        P     +     V   P+ CLMNQDKVLMESWYYLKDA+LEGG
Sbjct:   76 MLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPL-CLMNQDKVLMESWYYLKDAILEGG 151          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.713e-26
Identity = 64/107 (59.81%), Postives = 71/107 (66.36%), Query Frame = 2
Query:   62 NLPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            +LPDGKVERLYGLAPVCKF   K     +        + +    +    K   L  GIPFNKAYGM AF+YHG D RFNK+FN GMS HSTITMKKILE YKGFEGL
Sbjct:   96 DLPDGKVERLYGLAPVCKFLT-KNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGL 201          

HSP 2 Score: 73.9442 bits (180), Expect = 2.760e-13
Identity = 42/77 (54.55%), Postives = 50/77 (64.94%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDRILRLLASYS+L CSL+  P  +        P     +     V   P+ CLMNQDKVLMESWYYLKDA+L+GG
Sbjct:   76 MLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPL-CLMNQDKVLMESWYYLKDAILDGG 151          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.272e-26
Identity = 63/106 (59.43%), Postives = 70/106 (66.04%), Query Frame = 2
Query:   65 LPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            LPDGKVERLYGL PVCKF   K     +  +     + +    +    K   L  GIPFNKAYGM AFDYHG D RFNK+FN GM+ HSTITMKKILE YKGFEGL
Sbjct:   97 LPDGKVERLYGLGPVCKFLT-KNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGL 201          

HSP 2 Score: 67.3958 bits (163), Expect = 2.583e-11
Identity = 40/77 (51.95%), Postives = 51/77 (66.23%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDR+LRLLASYS+L  SLR  P  +  E L+    +     K +  +     CLMNQDKVL+ESWY+LKDAVL+GG
Sbjct:   76 MLDRMLRLLASYSILTYSLRTLPDGKV-ERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGG 151          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.843e-25
Identity = 64/106 (60.38%), Postives = 70/106 (66.04%), Query Frame = 2
Query:   65 LPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            LP GKVERLYGLAPVCKF   K     +   F+     +         K   L+ GIPFNKAYGMN FDYHG D RFNK+FN GMSS+STITMKKILE Y GFEGL
Sbjct:  100 LPSGKVERLYGLAPVCKFLT-KNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGL 204          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.146e-25
Identity = 62/107 (57.94%), Postives = 68/107 (63.55%), Query Frame = 2
Query:   65 LPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLN 385
            LPDGKVERLYGLAPVCKF   K     +        + +    +    K   L  GIPFNKAYGM AF+YHG D RFNK+FN GMS HSTITMKKI E Y GFE LN
Sbjct:  102 LPDGKVERLYGLAPVCKFLT-KNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALN 207          

HSP 2 Score: 75.0998 bits (183), Expect = 1.239e-13
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDR+LRLLASYSV+ CSLR+ P  +  E L+    +     K +  +     CLMNQDKVLMESWYYLKDA+L+GG
Sbjct:   81 MLDRVLRLLASYSVVTCSLRELPDGKV-ERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGG 156          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.195e-24
Identity = 61/106 (57.55%), Postives = 69/106 (65.09%), Query Frame = 2
Query:   65 LPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            L DGKVERLYGL PVCKF   K     +        + +    +    K   L+ GIPFNKAYGM AF+YHG D RFNK+FN GM+ HSTITMKKILE YKGFEGL
Sbjct:   97 LADGKVERLYGLGPVCKFLT-KNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGL 201          

HSP 2 Score: 65.4698 bits (158), Expect = 9.817e-11
Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDR+LRLLASYS+L  SLR     +  E L+    +     K +  +     CLMNQDKVL+ESWY+LKDAVLEGG
Sbjct:   76 MLDRMLRLLASYSILTYSLRTLADGKV-ERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGG 151          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.195e-24
Identity = 62/107 (57.94%), Postives = 71/107 (66.36%), Query Frame = 2
Query:   62 NLPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            NL DG VERLYGLAPVCKF   K     +    +   + +    +    K   L  GIPFNKAYGM AF+YHG D RFNK+FN GMS+HSTITMKKILE Y+GFEGL
Sbjct:   83 NLADGGVERLYGLAPVCKFLT-KNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGL 188          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.038e-24
Identity = 62/113 (54.87%), Postives = 72/113 (63.72%), Query Frame = 2
Query:   44 LIALCANLPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            LI    +LPDGKVERLYGLA VCKF   K     +        + +    +    K   L+ GIPFNKAYGM AF+YHG D RFNK+FN GMS HS + MKKILE+YKGFEGL
Sbjct:   89 LICSLRDLPDGKVERLYGLASVCKFLT-KNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGL 200          

HSP 2 Score: 73.559 bits (179), Expect = 3.605e-13
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDRILRLLASYS+L CSLR  P  +  E L+    +     K +  +     CLMNQDKVLMESWY+LKDA+LEGG
Sbjct:   75 MLDRILRLLASYSILICSLRDLPDGKV-ERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGG 150          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.661e-24
Identity = 59/107 (55.14%), Postives = 73/107 (68.22%), Query Frame = 2
Query:   62 NLPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            +LPDG +ERLY LAPVCKF   K     +  + +   + +    +    K   L+ GIPFNKAYGM AF+YHGKD RFNK+FN GMS+HSTI MKKILE Y+GF+GL
Sbjct:   96 DLPDGGIERLYSLAPVCKFLT-KNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGL 201          

HSP 2 Score: 71.633 bits (174), Expect = 1.370e-12
Identity = 43/77 (55.84%), Postives = 51/77 (66.23%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDRILRLLASYSVLNC+L+  P     E L+    +     K +  +      LMNQDKVLMESWY+LKDAVLEGG
Sbjct:   76 MLDRILRLLASYSVLNCTLKDLPDGGI-ERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGG 151          
The following BLAST results are available for this feature:
BLAST of CK739614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
COMT1_EUCGU3.358e-2761.68Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_POPKI2.177e-2659.81Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM3.713e-2659.81Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_ROSCH8.272e-2659.43Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
IEMT_CLABR1.843e-2560.38(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_CLABR9.146e-2557.94Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_PRUDU1.195e-2457.55Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_COFCA1.195e-2457.94Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT3_POPKI2.038e-2454.87Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_CATRO2.661e-2455.14Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6001 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739614 ID=CK739614; Name=CK739614; organism=Citrus sinensis; type=EST; length=385bp
GTGCTTGATCGTATATTGCGCCTTCTGGCGAGCTATTCAGTCCTTAATTG
CTCTTTGCGCAAATCTCCCCGACGGCAAAGTTGAGAGGCTTTATGGCCTT
GCCCCCGTTTGTAAATTCCCTCACTAAAAATGAAGATGGTGTTACACTTT
CCGATCTTTTGTCTCATGAACCAAGACAAGGTTCTCATGGAGAGCTGGTA
CTACTTAAAAGATGCAGTGCTTGAAGGTGGGCATTCCATTTAACAAGGCC
TATGGGATGAATGCATTCGATTACCATGGCAAAGATCTAAGATTCAACAA
GATTTTCAACAATGGAATGTCTTCTCATTCTACCATTACCATGAAGAAAA
TTCTTGAAAATTACAAAGGGTTTGAAGGCCTCAAC
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