CK739622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739622 vs. ExPASy Swiss-Prot
Match: SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.027e-31 Identity = 68/139 (48.92%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 1 AIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLN 417 AI++L +AQ+VC SW R+C DP+MWR IDMHNLGDL DMD++LE MCRHAVDRS G L+ I I YFGT +LL YIA + C I+D GF EA+ P E+L VG C +++ KLN Sbjct: 36 AIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLPLEELELSYCSFSV-ESLRVVGQCCLNMKTLKLN 173
BLAST of CK739622 vs. ExPASy Swiss-Prot
Match: FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.103e-28 Identity = 61/148 (41.22%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 1 AIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKI 444 AI++L +AQ+VC W R+C DP+MWR ID+ N D +DLE MCRHAVDRS+G L+ I I Y+GT++L+ YIA V C+ I+D+G +A+ P E+L +G CP L++ KLN R P+I Sbjct: 198 AIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLN----RAPEI 341
BLAST of CK739622 vs. ExPASy Swiss-Prot
Match: FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9 PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.117e-20 Identity = 56/146 (38.36%), Postives = 74/146 (50.68%), Query Frame = 1 Query: 1 AIDVLTSAQRVCSSWLRICHDPAMWRNIDM---HNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQE-ALEAVGSLCPLLRSFKLNNRG 426 AI++L +AQRVC SW R+C DP+MWR ID+ NL + ++ + +E +C AVD S G LL INI+Y L YIA V C + +G EA P +E L+ VG CP LR+ KLN G Sbjct: 38 AIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTG 183
BLAST of CK739622 vs. ExPASy Swiss-Prot
Match: FB221_ARATH (Putative F-box protein At4g05480 OS=Arabidopsis thaliana GN=At4g05480 PE=4 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 6.763e-19 Identity = 52/140 (37.14%), Postives = 73/140 (52.14%), Query Frame = 1 Query: 7 DVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRG 426 D+L +A+++C +W RIC DP+MWR I NL D + D E MCRH VD S G LL INIE+F +D LL YI ++++G I+ P + L+A+G CP L++ KLN+ G Sbjct: 59 DILDNARKLCRAWRRICKDPSMWRKI---NLRDCLMYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEKLPLLETLVIFHSSIKLD-LKAIGHACPQLKTLKLNSLG 194
BLAST of CK739622 vs. ExPASy Swiss-Prot
Match: FBL21_ARATH (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana GN=FBL21 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.842e-16 Identity = 54/146 (36.99%), Postives = 71/146 (48.63%), Query Frame = 1 Query: 7 DVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINI-EYFGTDELLQYIAXXXXXXXXXXXVSCY-NISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCP 438 D+L +AQ+VC W RIC DP+MWR I N D + D MCRH VD S G LL IN+ E+F +D LL YI C+ ++ G AI P + L+A+G CP L++ KLN+ G P Sbjct: 65 DILDNAQKVCKEWRRICKDPSMWRKI---NTRDCLMYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRNLRSLGLG--MCFPRVTKLGVVNAIAKIPLLETLEVTHSCIKLD-LKAIGHACPQLKTLKLNSLGRLWP 204
BLAST of CK739622 vs. ExPASy Swiss-Prot
Match: FBL22_ARATH (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana GN=FBL22 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.473e-15 Identity = 49/139 (35.25%), Postives = 69/139 (49.64%), Query Frame = 1 Query: 4 IDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEY--FGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKL 414 +++L +A++VC SW R+ DP +WR IDM NL L+ + + +E CRH VD S G LL NI+ F T LL Y+A V I+ G EAI P +E + +G CP L++ KL Sbjct: 45 LEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYCI-YAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMA-ERSSNLRRLRVKGGQITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKL 181 The following BLAST results are available for this feature:
BLAST of CK739622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739622 ID=CK739622; Name=CK739622; organism=Citrus sinensis; type=EST; length=446bpback to top |