CK739685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ARATH (Dihydroorotate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=PYRD PE=1 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 8.822e-56 Identity = 108/143 (75.52%), Postives = 121/143 (84.62%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VKIAPDLS+ +LEDIAAVA+AL LDGLIISNTT+SRPD VSNNPVA ET N+L++MY LTRGKIPLIGCGG+SSGEDAY+KIRAGATLVQLYT FAYGGPALIPQIK EL +CL+RDGFKSI EA+GAD+R Sbjct: 318 VKIAPDLSRGELEDIAAVALALHLDGLIISNTTVSRPDAVSNNPVATETGGLSGKPLFALSTNMLRDMYTLTRGKIPLIGCGGVSSGEDAYKKIRAGATLVQLYTGFAYGGPALIPQIKEELVKCLERDGFKSIHEAIGADHR 460
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_AZOC5 (Dihydroorotate dehydrogenase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=pyrD PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.114e-33 Identity = 75/143 (52.45%), Postives = 96/143 (67.13%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VK+APDL LE +A V + L +DG+I+ NTTISRPD + + ET L +Y L RG+IPL+G GGI+SG DAY KIRAGA+LVQLY+A + GPAL+P+IKA+LA LK DGF+S+ +AVGAD R Sbjct: 215 VKVAPDLDDAGLEAVAEVTLELGVDGIIMGNTTISRPDSLRSRHKG-ETGGLSGAPLFTLSTERLGALYRLVRGRIPLVGAGGIASGADAYAKIRAGASLVQLYSALVFHGPALVPRIKADLAARLKADGFRSVADAVGADIR 356
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_HUMAN (Dihydroorotate dehydrogenase, mitochondrial OS=Homo sapiens GN=DHODH PE=1 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 1.049e-32 Identity = 69/143 (48.25%), Postives = 96/143 (67.13%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VKIAPDL+ +D EDIA+V L +DGLI++NTT+SRP + + ET ++EMY LT+G++P+IG GG+SSG+DA KIRAGA+LVQLYTA + GP ++ ++K EL LK GF + +A+GAD+R Sbjct: 253 VKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQG-ALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR 394
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_PONAB (Dihydroorotate dehydrogenase, mitochondrial OS=Pongo abelii GN=DHODH PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.790e-32 Identity = 69/143 (48.25%), Postives = 96/143 (67.13%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VKIAPDL+ +D EDIA+V L +DGLI++NTT+SRP + + ET ++EMY LT+G++P+IG GG+SSG+DA KIRAGA+LVQLYTA + GP ++ ++K EL LK GF + +A+GAD+R Sbjct: 253 VKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQG-ALRSETGGLSGKPPRDLSTETIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFCRVTDAIGADHR 394
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_RAT (Dihydroorotate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Dhodh PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.988e-32 Identity = 70/143 (48.95%), Postives = 98/143 (68.53%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VKIAPDL+ +D EDIA+VA L +DGLI++NTT+SRP + + ET ++EMY LT+G+IP+IG GG+SSG+DA KI+AGA+LVQLYTA + GP ++ ++K EL LK GF ++ +A+GAD+R Sbjct: 253 VKIAPDLTAQDKEDIASVARELGIDGLIVTNTTVSRPVGLQG-ALRSETGGLSGKPLRDLSTQTIREMYALTQGRIPIIGVGGVSSGQDALEKIQAGASLVQLYTALIFLGPPVVVRVKRELEALLKERGFTTVTDAIGADHR 394
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_MOUSE (Dihydroorotate dehydrogenase, mitochondrial OS=Mus musculus GN=Dhodh PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 8.884e-32 Identity = 70/143 (48.95%), Postives = 96/143 (67.13%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VKIAPDL+ +D EDIA+VA L +DGLII+NTT+SRP + + ET ++EMY LT+G IP+IG GG+SSG+DA KI+AGA+LVQLYTA + GP ++ ++K EL LK GF ++ +A+G D+R Sbjct: 253 VKIAPDLTAQDKEDIASVARELGIDGLIITNTTVSRPVGLQG-ALRSETGGLSGKPLRDLSTQTIREMYALTQGTIPIIGVGGVSSGQDALEKIQAGASLVQLYTALTFLGPPVVARVKRELEALLKERGFNTVTDAIGVDHR 394
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BOVIN (Dihydroorotate dehydrogenase, mitochondrial OS=Bos taurus GN=DHODH PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.979e-31 Identity = 67/143 (46.85%), Postives = 94/143 (65.73%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VKIAPDL+ +D EDIA+V L +DGLI++N+T+SRP + + E ++EMY LT+G++P++G GG+SSG+DA KIRAGA+LVQLYTA Y GP ++ +K EL LK GF + +A+GAD+R Sbjct: 253 VKIAPDLTAQDKEDIASVVRELGIDGLIVTNSTVSRPASLQG-ALRSEPGGLSGKPLRDLSTQTIREMYALTQGRVPIVGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVGGVKRELEALLKEQGFARVTDAIGADHR 394
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_RHORT (Dihydroorotate dehydrogenase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=pyrD PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.585e-31 Identity = 69/143 (48.25%), Postives = 97/143 (67.83%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 +K+APDL+ ED+ DIA VA+ LDGLI +NTTI+RP + ++ A ET ++ +Y LT+G +PLIG GGI G +AY +IRAGA+L+Q+Y+A Y GP L+ +IK +LA+ L+ DGF S+ EAVGAD+R Sbjct: 211 LKVAPDLTDEDMADIAEVALGGGLDGLICTNTTIARPKSLVSDH-AGETGGLSGLPLRYRARQVIARLYGLTKGALPLIGVGGIGDGAEAYARIRAGASLIQIYSALVYEGPGLVGRIKRDLAQRLRADGFASVAEAVGADHR 352
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_PARL1 (Dihydroorotate dehydrogenase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=pyrD PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.409e-31 Identity = 75/141 (53.19%), Postives = 94/141 (66.67%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 +KIAPDL+ E+L DIA VA+ LDGLI+SNTTI+R VS A ET +L++MY LT G++PL+G GGISS +DAY KIRAGA+LVQLY+A Y GP L+ +IK LA L DGF + +AVGAD Sbjct: 206 LKIAPDLNAEELGDIAEVALEQGLDGLIVSNTTIAREGLVSGVN-ANETGGLSGAPLFPMSTAVLRDMYRLTGGRLPLVGVGGISSADDAYAKIRAGASLVQLYSALTYDGPPLVARIKQGLAARLAADGFAHLKDAVGAD 345
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ANADF (Dihydroorotate dehydrogenase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=pyrD PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 3.493e-28 Identity = 61/148 (41.22%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR*LRRA 444 VK+APDLS L++ VA+ + G++ +NTT+SR V +P A+E ++++ Y+ G++P++GCGG+ + E AY KIRAGATLVQ+YT YGGP + ++ LA L RDGF+++ EAVGAD RA Sbjct: 215 VKLAPDLSPTALDEAVDVAIDAGVSGIVATNTTLSRAG-VERHPRAREAGGLSGAPLEALATSVVRRCYIRAAGRVPIVGCGGVMNAEGAYAKIRAGATLVQVYTGLVYGGPGFVRRLNDGLARLLARDGFRTVAEAVGADVETAERA 361 The following BLAST results are available for this feature:
BLAST of CK739685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 388
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739685 ID=CK739685; Name=CK739685; organism=Citrus sinensis; type=EST; length=488bpback to top |