CK739691

Overview
NameCK739691
Unique NameCK739691
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length219
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4376 contig Csv1_Contig4376:447..665. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739691 vs. ExPASy Swiss-Prot
Match: TCTP_HEVBR (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.014e-33
Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 1
Query:    1 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDG 219
            VDIVDTFRLQEQPAFDKK FVTYMKRFIKLLTPKL EE+QE FKKNIEGATKFLLSKLSDLQFFVGESMHDDG
Sbjct:   68 VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMHDDG 140          
BLAST of CK739691 vs. ExPASy Swiss-Prot
Match: TCTP_ELAGV (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.093e-30
Identity = 64/73 (87.67%), Postives = 69/73 (94.52%), Query Frame = 1
Query:    1 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDG 219
            VDIVDTFRLQEQPAFDKK FVT+MKR+IK LTPKL  E+QE+FKK+IEGATKFLLSKLSDLQFFVGESMHDDG
Sbjct:   68 VDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQFFVGESMHDDG 140          
BLAST of CK739691 vs. ExPASy Swiss-Prot
Match: TCTP_SOLLC (Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.336e-28
Identity = 61/73 (83.56%), Postives = 64/73 (87.67%), Query Frame = 1
Query:    1 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDG 219
            VDIVDTFRLQEQPAFDKK FVT+MKR+IK LTPKL  E QE FKKNIE ATKFLL K+ DLQFFVGESMHDDG
Sbjct:   68 VDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLEGETQEAFKKNIEAATKFLLQKIKDLQFFVGESMHDDG 140          
BLAST of CK739691 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.745e-28
Identity = 62/72 (86.11%), Postives = 66/72 (91.67%), Query Frame = 1
Query:    1 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDD 216
            VDIVDTFRLQEQP FDKK FVT++KR+IKLLTPKL  E+QE FKKNIEGATKFLLSKLSDLQFFVGESM DD
Sbjct:   70 VDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDD 141          
BLAST of CK739691 vs. ExPASy Swiss-Prot
Match: TCTP_MEDSA (Translationally-controlled tumor protein homolog OS=Medicago sativa GN=TCTP PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 6.632e-28
Identity = 58/73 (79.45%), Postives = 66/73 (90.41%), Query Frame = 1
Query:    1 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDG 219
            VDIVD FRLQEQPAFDKK F+ ++KR+IKLLTPKL  E+QE+FKK+IEGATK+LL KL DLQFFVGESMHDDG
Sbjct:   67 VDIVDVFRLQEQPAFDKKQFLGFVKRYIKLLTPKLDAEKQELFKKHIEGATKYLLCKLKDLQFFVGESMHDDG 139          
BLAST of CK739691 vs. ExPASy Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.131e-27
Identity = 60/72 (83.33%), Postives = 62/72 (86.11%), Query Frame = 1
Query:    1 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDD 216
            VDIVDTFRLQEQPAFDKK FVTY+KR+IK LTPKL  E QE FKKNIE ATKFLLSKL D QFFVGE MHDD
Sbjct:   68 VDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLKDFQFFVGEGMHDD 139          
BLAST of CK739691 vs. ExPASy Swiss-Prot
Match: TCTP_SOYBN (Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.477e-27
Identity = 59/72 (81.94%), Postives = 65/72 (90.28%), Query Frame = 1
Query:    1 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDD 216
            VDIVDTFRLQEQPAFDKK FVT+MKRFIK LTPKL  E+QE+FKK+IEGATK+LLSK+ D QFFVGESM DD
Sbjct:   68 VDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKYLLSKIKDFQFFVGESMGDD 139          
BLAST of CK739691 vs. ExPASy Swiss-Prot
Match: TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.930e-27
Identity = 59/73 (80.82%), Postives = 64/73 (87.67%), Query Frame = 1
Query:    1 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDG 219
            VDIVDTFRLQEQP FDKK FVT+MKR+IK L+ KL  E+QE FKKNIEGATK+LL KL DLQFFVGESMHDDG
Sbjct:   68 VDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKYLLGKLKDLQFFVGESMHDDG 140          
BLAST of CK739691 vs. ExPASy Swiss-Prot
Match: TCTP_PEA (Translationally-controlled tumor protein homolog OS=Pisum sativum GN=TCTP PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 4.299e-27
Identity = 57/73 (78.08%), Postives = 64/73 (87.67%), Query Frame = 1
Query:    1 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDG 219
            VDIVD FRLQEQP FDKK F+ ++K++IKLLTPKL  E+QE FKKNIEGATK+LL KL DLQFFVGESMHDDG
Sbjct:   67 VDIVDVFRLQEQPPFDKKQFLGFVKKYIKLLTPKLEAEKQEHFKKNIEGATKYLLGKLKDLQFFVGESMHDDG 139          
BLAST of CK739691 vs. ExPASy Swiss-Prot
Match: TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.299e-27
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 1
Query:    1 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDD 216
            VDIVDTFRLQEQP  DKK F+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKFLL KL D +FFVGESMHDD
Sbjct:   68 VDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKDFRFFVGESMHDD 139          
The following BLAST results are available for this feature:
BLAST of CK739691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
TCTP_HEVBR4.014e-3394.52Translationally-controlled tumor protein homolog O... [more]
TCTP_ELAGV1.093e-3087.67Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLLC1.336e-2883.56Translationally-controlled tumor protein homolog O... [more]
TCTP_FRAAN1.745e-2886.11Translationally-controlled tumor protein homolog O... [more]
TCTP_MEDSA6.632e-2879.45Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLTU1.131e-2783.33Translationally-controlled tumor protein homolog O... [more]
TCTP_SOYBN1.477e-2781.94Translationally-controlled tumor protein homolog O... [more]
TCTP_ORYSJ1.930e-2780.82Translationally-controlled tumor protein homolog O... [more]
TCTP_PEA4.299e-2778.08Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCMA4.299e-2779.17Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6078 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE58E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739691 ID=CK739691; Name=CK739691; organism=Citrus sinensis; type=EST; length=219bp
GTTGACATTGTCGACACATTCAGGCTACAGGAGCAACCCGCTTTTGACAA
GAAGCCGTTTGTAACATACATGAAGAGATTCATCAAGTTGCTGACGCCCA
AGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTGAGGGAGCG
ACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTTGTTGGGGA
GAGCATGCATGATGATGGC
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