CK739705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739705 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 9.343e-81 Identity = 128/147 (87.07%), Postives = 140/147 (95.24%), Query Frame = 1 Query: 49 GQWP--AVVGIFVGQTWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEAGQGKTP 483 G+W AV+GIFVGQ WSGIPWFEAGADPGAIAPFSFG+LLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TAENFAN TGEQGYPGGKFFDPL LAGT+ +GVY+PDTEKL+RLKVAEIKHARLAM+AMLIFYFEAGQGKTP Sbjct: 104 GRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFEAGQGKTP 250 HSP 2 Score: 45.8246 bits (107), Expect = 9.343e-81 Identity = 19/19 (100.00%), Postives = 19/19 (100.00%), Query Frame = 3 Query: 3 AFLKWYREAELIHGRWAMA 59 AFLKWYREAELIHGRWAMA Sbjct: 91 AFLKWYREAELIHGRWAMA 109
BLAST of CK739705 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 3.853e-79 Identity = 126/147 (85.71%), Postives = 140/147 (95.24%), Query Frame = 1 Query: 49 GQWP--AVVGIFVGQTWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEAGQGKTP 483 G+W AV+GIFVGQ W+GIPWFEAGADPGA+APFSFG+LLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWSRTAENF+N+TGEQGYPGGKFFDPL LAGTI +GVY PDT+KL+RLK+AEIKHARLAM+AMLIFYFEAGQGKTP Sbjct: 109 GRWAMLAVLGIFVGQAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTP 255 HSP 2 Score: 44.2838 bits (103), Expect = 3.853e-79 Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 3 AFLKWYREAELIHGRWAM 56 AFLKWYREAELIHGRWAM Sbjct: 96 AFLKWYREAELIHGRWAM 113
BLAST of CK739705 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 3.854e-79 Identity = 125/147 (85.03%), Postives = 139/147 (94.56%), Query Frame = 1 Query: 49 GQWP--AVVGIFVGQTWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEAGQGKTP 483 G+W AV+GIFVGQ WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+TAENFAN TGEQGYPGGKFFDPL LAGT+ +GVY+PDTEKL+RLK+AEIKH+RLAM+AMLIFYFEAGQGKTP Sbjct: 104 GRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFEAGQGKTP 250 HSP 2 Score: 45.8246 bits (107), Expect = 3.854e-79 Identity = 19/19 (100.00%), Postives = 19/19 (100.00%), Query Frame = 3 Query: 3 AFLKWYREAELIHGRWAMA 59 AFLKWYREAELIHGRWAMA Sbjct: 91 AFLKWYREAELIHGRWAMA 109
BLAST of CK739705 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 3.378e-13 Identity = 54/156 (34.62%), Postives = 76/156 (48.72%), Query Frame = 1 Query: 49 GQWPAV--VGIFVGQTWSGIPWFEAGADP--------GAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEAG-QGKTP 483 G+W + +G + +GI W +AG G PFS +L+ ++L++G++E +R + +PE + YPGG +FDPL LA D EKLD LK+AEIKH+RLAMVA LIF +A GK P Sbjct: 145 GRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSEL-DPEKRI----------------------YPGG-YFDPLGLAA---------DPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGP 267 HSP 2 Score: 29.6462 bits (65), Expect = 3.378e-13 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 18 YREAELIHGRWAM 56 +RE ELIHGRWAM Sbjct: 137 FRECELIHGRWAM 149 The following BLAST results are available for this feature:
BLAST of CK739705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739705 ID=CK739705; Name=CK739705; organism=Citrus sinensis; type=EST; length=591bpback to top |