CK739706
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER2_ARATH (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.996e-38 Identity = 58/92 (63.04%), Postives = 70/92 (76.09%), Query Frame = 2
Query: 92 KSSSLHPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367
K + PEGE E+EC DD Y+LDAAE+AGIDLPYSCRAGSCS+CAGK FL+D+QI G+VLTC AYPTSDVT+ETHK+E++
Sbjct: 56 KVKFITPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDI 147 HSP 2 Score: 50.8322 bits (120), Expect = 2.996e-38 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 1 LKAMPNMG-QALFGLKANNNRGGRVIAMATYKVKLITPRG 117
L+++P+ Q+LFGLK+ RGGRV AMATYKVK ITP G
Sbjct: 25 LRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEG 64
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 8.633e-38 Identity = 57/90 (63.33%), Postives = 69/90 (76.67%), Query Frame = 2
Query: 92 KSSSLHPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDE 361
K + PEGEQE+EC +D Y+LDAAE+AG+DLPYSCRAGSCS+CAGK FL+D+Q+ GYVLTCVAYPTSDV +ETHK+E
Sbjct: 56 KVKFITPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKEE 145 HSP 2 Score: 49.6766 bits (117), Expect = 8.633e-38 Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 1
Query: 25 QALFGLKANNNRGGRVIAMATYKVKLITPRG 117
Q+LFGLK++ RGGRV AMATYKVK ITP G
Sbjct: 34 QSLFGLKSSTARGGRVTAMATYKVKFITPEG 64
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.947e-36 Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 2
Query: 92 KSSSLHPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367
K + P+G E +CPD+ YILD AE+AG DLPYSCRAGSCS+CAGK FL+DDQ++ G+VLTCVAYP SDVT+ETHK+ E+
Sbjct: 51 KVKLITPDGPIEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAEL 142 HSP 2 Score: 52.373 bits (124), Expect = 5.947e-36 Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 1 LKAMPNMGQALFGLKANNNRGGRVIAMATYKVKLITPRG 117
LK +PN+G+ALFGLK+ N GG+V MA+YKVKLITP G
Sbjct: 23 LKPIPNVGEALFGLKSAN--GGKVTCMASYKVKLITPDG 59
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER1_SOLLC (Ferredoxin-1, chloroplastic OS=Solanum lycopersicum GN=SEND33 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.747e-36 Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 2
Query: 92 KSSSLHPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 370
K + PEG E ECPDD YILD AE+ G DLPYSCRAGSCS+CAGK FL++DQ AG+VLTCVAYP DVT+ETHK+EE++
Sbjct: 51 KVKLITPEGPIEFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDEDQEAAGFVLTCVAYPKGDVTIETHKEEELT 143 HSP 2 Score: 51.2174 bits (121), Expect = 7.747e-36 Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 1
Query: 1 LKAMPNMGQALFGLKANNNRGGRVIAMATYKVKLITPRG 117
LKA+ N+G+ALFGLK+ N GR+ MA+YKVKLITP G
Sbjct: 23 LKAISNVGEALFGLKSGRN--GRITCMASYKVKLITPEG 59
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER1_SPIOL (Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 3.134e-34 Identity = 58/93 (62.37%), Postives = 69/93 (74.19%), Query Frame = 2
Query: 92 KSSSLHPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 370
K + + P G E +CPDD YILDAAE+ GIDLPYSCRAGSCS+CAGK FL+DDQID G+VLTC AYP SDVT+ETHK+EE++
Sbjct: 54 KVTLVTPTGNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVSDVTIETHKEEELT 146 HSP 2 Score: 38.5058 bits (88), Expect = 3.134e-34 Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 1
Query: 1 LKAMP-NMGQALFGLKANNNRGGRVIAMATYKVKLITPRG 117
+ A+P N G++LFGLK + RGGR+ MA YKV L+TP G
Sbjct: 25 MAALPSNTGRSLFGLKTGS-RGGRM-TMAAYKVTLVTPTG 62
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER_SILPR (Ferredoxin, chloroplastic OS=Silene pratensis GN=PETF PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.532e-33 Identity = 52/85 (61.18%), Postives = 65/85 (76.47%), Query Frame = 2
Query: 116 GEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 370
G +CPDD Y+LD AE+ GIDLPYSCRAGSCS+CAGK FL+DDQI+AG+VLTC AYP++DVT+ETHK+EE++
Sbjct: 61 GTVTFDCPDDVYVLDQAEEEGIDLPYSCRAGSCSSCAGKVVAGSVDQSDQSFLDDDQIEAGWVLTCAAYPSADVTIETHKEEELT 145 HSP 2 Score: 44.2838 bits (103), Expect = 1.532e-33 Identity = 24/31 (77.42%), Postives = 25/31 (80.65%), Query Frame = 1
Query: 16 NMGQALFGLKANNNRGGRVIAMATYKVKLIT 108
NMGQALFGLKA + GRV AMATYKV LIT
Sbjct: 29 NMGQALFGLKAGSR--GRVTAMATYKVTLIT 57
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER_BRANA (Ferredoxin OS=Brassica napus PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.874e-32 Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 2
Query: 92 KSSSLHPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367
K + PEGEQE+EC DD Y+LDAAE+AGIDLPYSCRAGSCS+CAGK FL+DDQI G+VLTC AYPTSDVT+ETHK+EE+
Sbjct: 4 KVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPTSDVTIETHKEEEL 95 HSP 2 Score: 24.6386 bits (52), Expect = 4.874e-32 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 1
Query: 82 ATYKVKLITPRG 117
ATYKVK ITP G
Sbjct: 1 ATYKVKFITPEG 12
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER_SYNY3 (Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803) GN=petF PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 6.348e-32 Identity = 60/86 (69.77%), Postives = 70/86 (81.40%), Query Frame = 2
Query: 110 PEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367
P+GE IEC DDTYILDAAE+AG+DLPYSCRAG+CSTCAGK FL+DDQI+AGYVLTCVAYPTSD T+ETHK+E++
Sbjct: 11 PDGESSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96 HSP 2 Score: 23.8682 bits (50), Expect = 6.348e-32 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 1
Query: 79 MATYKVKLITPRGRA 123
MA+Y VKLITP G +
Sbjct: 1 MASYTVKLITPDGES 15
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 8.268e-32 Identity = 60/86 (69.77%), Postives = 70/86 (81.40%), Query Frame = 2
Query: 110 PEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367
P+GE IEC DDTYILDAAE+AG+DLPYSCRAG+CSTCAGK FL+DDQI+AGYVLTCVAYPTSD T+ETHK+E++
Sbjct: 11 PDGENSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96 HSP 2 Score: 23.483 bits (49), Expect = 8.268e-32 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 1
Query: 79 MATYKVKLITPRG 117
MA+Y VKLITP G
Sbjct: 1 MASYTVKLITPDG 13
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER3_RAPSA (Ferredoxin, leaf L-A OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.077e-31 Identity = 60/92 (65.22%), Postives = 71/92 (77.17%), Query Frame = 2
Query: 92 KSSSLHPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367
K + PEGEQE+EC DD Y+LDAAE+AGIDLPYSCRAGSCS+CAGK FL+DDQI G+VLTC AYPTSDVT+ETH++E+M
Sbjct: 4 KVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIAEGFVLTCAAYPTSDVTIETHREEDM 95 HSP 2 Score: 24.6386 bits (52), Expect = 1.077e-31 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 1
Query: 82 ATYKVKLITPRG 117
ATYKVK ITP G
Sbjct: 1 ATYKVKFITPEG 12 The following BLAST results are available for this feature:
BLAST of CK739706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739706 ID=CK739706; Name=CK739706; organism=Citrus sinensis; type=EST; length=612bpback to top |