CK739709

Overview
NameCK739709
Unique NameCK739709
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7050 contig Csv1_Contig7050:596..1084. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739709 vs. ExPASy Swiss-Prot
Match: CRD1_EUPES (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Euphorbia esula GN=CRD1 PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 3.517e-68
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 1
Query:  124 RLDTWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF 489
            ++  WRYITIYRHLK NPE+QCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF
Sbjct:  217 KIGYWRYITIYRHLKENPEYQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF 338          

HSP 2 Score: 98.2117 bits (243), Expect = 2.053e-20
Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 3
Query:    3 FLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIG---YLEIHYHIQTSQGQP*VPMLSHFQ 203
            FLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIG   Y+ I+ H++ +      P+  +F+
Sbjct:  177 FLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKENPEYQCYPIFKYFE 246          
BLAST of CK739709 vs. ExPASy Swiss-Prot
Match: CRD1_GOSHI (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Gossypium hirsutum GN=CRD1 PE=2 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 1.746e-67
Identity = 114/122 (93.44%), Postives = 119/122 (97.54%), Query Frame = 1
Query:  124 RLDTWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF 489
            ++  WRYITIYRHLK NPE+QCYPIFKYFENWCQDENRHGDFFSAL+KAQPQFLNDWKAKLW+RFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF
Sbjct:  217 KIGYWRYITIYRHLKENPEYQCYPIFKYFENWCQDENRHGDFFSALLKAQPQFLNDWKAKLWSRFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF 338          

HSP 2 Score: 95.1301 bits (235), Expect = 1.738e-19
Identity = 47/70 (67.14%), Postives = 55/70 (78.57%), Query Frame = 3
Query:    3 FLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIG---YLEIHYHIQTSQGQP*VPMLSHFQ 203
            FLNKGLSDFN ALDLGFLTKARKYTFFKPKFIFYATYLSEKIG   Y+ I+ H++ +      P+  +F+
Sbjct:  177 FLNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKENPEYQCYPIFKYFE 246          
BLAST of CK739709 vs. ExPASy Swiss-Prot
Match: CRD1_ARATH (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Arabidopsis thaliana GN=CRD1 PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 1.930e-66
Identity = 113/122 (92.62%), Postives = 118/122 (96.72%), Query Frame = 1
Query:  124 RLDTWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF 489
            ++  WRYITIYRHLK NPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDW+AKLW+RFFCLSVYVTMYLNDCQRT FYEGIGL+TKEFDMHVIIETNRTTARIFPAVLDVENPEF
Sbjct:  221 KIGYWRYITIYRHLKENPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWQAKLWSRFFCLSVYVTMYLNDCQRTNFYEGIGLNTKEFDMHVIIETNRTTARIFPAVLDVENPEF 342          

HSP 2 Score: 94.3597 bits (233), Expect = 2.964e-19
Identity = 47/70 (67.14%), Postives = 55/70 (78.57%), Query Frame = 3
Query:    3 FLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIG---YLEIHYHIQTSQGQP*VPMLSHFQ 203
            FLNKGLSDFN ALDLGFLTKARKYTFFKPKFIFYATYLSEKIG   Y+ I+ H++ +      P+  +F+
Sbjct:  181 FLNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKENPEFQCYPIFKYFE 250          
BLAST of CK739709 vs. ExPASy Swiss-Prot
Match: CRD1_HORVU (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Hordeum vulgare GN=CRD1 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 6.864e-64
Identity = 108/122 (88.52%), Postives = 117/122 (95.90%), Query Frame = 1
Query:  124 RLDTWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF 489
            ++  WRYITI+RHLKANPE+Q YPIFKYFENWCQDENRHGDFFSAL+KAQPQFLNDWKAKLW+RFFCLSVY+TMYLNDCQR+AFYEGIGL+TKEFDMHVI ETNRTTARIFPAV DVENPEF
Sbjct:  229 KIGYWRYITIFRHLKANPEYQVYPIFKYFENWCQDENRHGDFFSALLKAQPQFLNDWKAKLWSRFFCLSVYITMYLNDCQRSAFYEGIGLNTKEFDMHVIYETNRTTARIFPAVPDVENPEF 350          

HSP 2 Score: 94.3597 bits (233), Expect = 2.964e-19
Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 3
Query:    3 FLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIG---YLEIHYHIQTSQGQP*VPMLSHFQ 203
            FLNKGLSDFN ALDLGFLTKARKYTFFKPKFIFYATYLSEKIG   Y+ I  H++ +      P+  +F+
Sbjct:  189 FLNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIFRHLKANPEYQVYPIFKYFE 258          
BLAST of CK739709 vs. ExPASy Swiss-Prot
Match: CTH1_CHLRE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2, chloroplastic OS=Chlamydomonas reinhardtii GN=CTH1 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.028e-51
Identity = 86/122 (70.49%), Postives = 107/122 (87.70%), Query Frame = 1
Query:  124 RLDTWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF 489
            ++  WRYI+IYRHL+ NP+ Q YP+F+YFENWCQDENRHGDFF+A++KA+P+ +NDW AKLW+RFFCLSVY+TMYLND QR AFY  +GL+T +F+ HVIIETN++T RIFPAV DVENPEF
Sbjct:  219 KIGYWRYISIYRHLQRNPDNQLYPLFEYFENWCQDENRHGDFFTAVLKARPEMVNDWAAKLWSRFFCLSVYITMYLNDHQRDAFYSSLGLNTTQFNQHVIIETNKSTERIFPAVPDVENPEF 340          

HSP 2 Score: 92.8189 bits (229), Expect = 8.625e-19
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 3
Query:    3 FLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIG---YLEIHYHIQTSQGQP*VPMLSHFQ 203
            FLNK +SDFN ALDLGFLTK RKYTFFKPKFIFYATYLSEKIG   Y+ I+ H+Q +      P+  +F+
Sbjct:  179 FLNKAMSDFNLALDLGFLTKNRKYTFFKPKFIFYATYLSEKIGYWRYISIYRHLQRNPDNQLYPLFEYFE 248          
BLAST of CK739709 vs. ExPASy Swiss-Prot
Match: ACSF_PORYE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Porphyra yezoensis GN=acsF PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 4.776e-49
Identity = 84/137 (61.31%), Postives = 105/137 (76.64%), Query Frame = 1
Query:   79 FSSQSLSFMPHIYLRRLDTWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF 489
            F S    F       ++  WRYITIYRHL+ +PE + YPIF++FENWCQDENRHGDFF+AL+K+QP FLNDWKAK+W RFF LSV+ TMYLND QR  FY  IGLD++++DM VI +TN + AR+FP  LDV+NP+F
Sbjct:  152 FFSPKFIFYATYLSEKIGYWRYITIYRHLEQHPEHRIYPIFRFFENWCQDENRHGDFFAALLKSQPHFLNDWKAKMWCRFFLLSVFATMYLNDFQRIDFYNAIGLDSRQYDMQVIRKTNESAARVFPVALDVDNPKF 288          

HSP 2 Score: 84.3445 bits (207), Expect = 3.068e-16
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 3
Query:    3 FLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIG---YLEIHYHIQTSQGQP*VPMLSHFQ 203
            FLNK + DFN +LDLGFLTK+RKYTFF PKFIFYATYLSEKIG   Y+ I+ H++        P+   F+
Sbjct:  127 FLNKAIGDFNLSLDLGFLTKSRKYTFFSPKFIFYATYLSEKIGYWRYITIYRHLEQHPEHRIYPIFRFFE 196          
BLAST of CK739709 vs. ExPASy Swiss-Prot
Match: ACSF3_ANASP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 3 OS=Anabaena sp. (strain PCC 7120) GN=acsF3 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 4.776e-49
Identity = 86/143 (60.14%), Postives = 107/143 (74.83%), Query Frame = 1
Query:   61 KLGNTHFSSQSLSFMPHIYLRRLDTWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF 489
            K  N  F      F       ++  WRYITIYRHL+A+PE + YPIF++FENWCQDENRHGDFF A+MK+QPQ LNDWKAKLW+RFF LSV+ TMYLND QR  FY  IGLD +++D++VI +TN T  R+FP +LDV++PEF
Sbjct:  155 KSRNYTFFKPKFIFYATYLSEKIGYWRYITIYRHLEAHPEDRIYPIFRFFENWCQDENRHGDFFDAIMKSQPQMLNDWKAKLWSRFFLLSVFATMYLNDIQRKDFYATIGLDARDYDIYVIKKTNETAGRVFPIILDVDSPEF 297          

HSP 2 Score: 86.2705 bits (212), Expect = 8.072e-17
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 3
Query:    3 FLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIG---YLEIHYHIQTSQGQP*VPMLSHFQ 203
            FLNK +SDFN +LDLGFLTK+R YTFFKPKFIFYATYLSEKIG   Y+ I+ H++        P+   F+
Sbjct:  136 FLNKAMSDFNLSLDLGFLTKSRNYTFFKPKFIFYATYLSEKIGYWRYITIYRHLEAHPEDRIYPIFRFFE 205          
BLAST of CK739709 vs. ExPASy Swiss-Prot
Match: CRD1_CHLRE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=CRD1 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 8.146e-49
Identity = 82/122 (67.21%), Postives = 104/122 (85.25%), Query Frame = 1
Query:  124 RLDTWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF 489
            ++  WRYITIYRHL+ NP+ Q YP+F+YFENWCQDENRHGDF +A +KA+P+ LN ++AKLW++FFCLSVY+TMYLND QRT FYE +GL+T++F+ HVIIETNR T R+FP V DVE+P F
Sbjct:  219 KIGYWRYITIYRHLQRNPDNQFYPLFEYFENWCQDENRHGDFLAACLKAKPELLNTFEAKLWSKFFCLSVYITMYLNDHQRTKFYESLGLNTRQFNQHVIIETNRATERLFPVVPDVEDPRF 340          

HSP 2 Score: 85.8853 bits (211), Expect = 1.054e-16
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 3
Query:    3 FLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIG---YLEIHYHIQTSQGQP*VPMLSHFQ 203
            FLNK LSDFN ALDLGFLTK R YT+FKPKFI YAT+LSEKIG   Y+ I+ H+Q +      P+  +F+
Sbjct:  179 FLNKALSDFNLALDLGFLTKNRTYTYFKPKFIIYATFLSEKIGYWRYITIYRHLQRNPDNQFYPLFEYFE 248          
BLAST of CK739709 vs. ExPASy Swiss-Prot
Match: ACSF_PORPU (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Porphyra purpurea GN=acsF PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 8.146e-49
Identity = 84/137 (61.31%), Postives = 104/137 (75.91%), Query Frame = 1
Query:   79 FSSQSLSFMPHIYLRRLDTWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF 489
            F S    F       ++  WRYITIYRH++  PE + YPIFK+FENWCQDENRHGDFF+AL+K+QP FLNDWKAK+W RFF LSV+ TMYLND QR  FY  IGLD++++DM VI +TN + AR+FP  LDV+NP+F
Sbjct:  152 FFSPKFIFYATYLSEKIGYWRYITIYRHMEQYPEHRIYPIFKFFENWCQDENRHGDFFAALLKSQPHFLNDWKAKMWCRFFLLSVFATMYLNDFQRIDFYNAIGLDSRQYDMQVIRKTNESAARVFPVALDVDNPKF 288          

HSP 2 Score: 83.5741 bits (205), Expect = 5.232e-16
Identity = 41/70 (58.57%), Postives = 49/70 (70.00%), Query Frame = 3
Query:    3 FLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIG---YLEIHYHIQTSQGQP*VPMLSHFQ 203
            FLNK + DFN +LDLGFLTK RKYTFF PKFIFYATYLSEKIG   Y+ I+ H++        P+   F+
Sbjct:  127 FLNKAIGDFNLSLDLGFLTKTRKYTFFSPKFIFYATYLSEKIGYWRYITIYRHMEQYPEHRIYPIFKFFE 196          
BLAST of CK739709 vs. ExPASy Swiss-Prot
Match: ACSF_TRIEI (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Trichodesmium erythraeum (strain IMS101) GN=acsF PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.095e-48
Identity = 81/122 (66.39%), Postives = 102/122 (83.61%), Query Frame = 1
Query:  124 RLDTWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEF 489
            ++  WRYITIYRHL+A+PE + YPIF++FENWCQDENRHGDFF A+M+A+P+FLNDW+AKLW RFF LSV+ TMYLND QR  FY  IGL+  ++D +VI +TN T+ R+FP +LDVENPEF
Sbjct:  176 KIGYWRYITIYRHLEAHPEDRIYPIFRFFENWCQDENRHGDFFDAIMRARPEFLNDWQAKLWCRFFLLSVFATMYLNDIQRADFYASIGLNACDYDKYVIEKTNETSGRVFPVILDVENPEF 297          

HSP 2 Score: 88.1965 bits (217), Expect = 2.124e-17
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 3
Query:    3 FLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIG---YLEIHYHIQTSQGQP*VPMLSHFQ 203
            FLNK +SDFN +LDLGFLTK+RKYTFFKPKFIFYATYLSEKIG   Y+ I+ H++        P+   F+
Sbjct:  136 FLNKAMSDFNLSLDLGFLTKSRKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLEAHPEDRIYPIFRFFE 205          
The following BLAST results are available for this feature:
BLAST of CK739709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CRD1_EUPES3.517e-6895.08Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_GOSHI1.746e-6793.44Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_ARATH1.930e-6692.62Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_HORVU6.864e-6488.52Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CTH1_CHLRE1.028e-5170.49Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PORYE4.776e-4961.31Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF3_ANASP4.776e-4960.14Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_CHLRE8.146e-4967.21Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PORPU8.146e-4961.31Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_TRIEI3.095e-4866.39Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6098 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE58G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739709 ID=CK739709; Name=CK739709; organism=Citrus sinensis; type=EST; length=490bp
GGTTTCTGAACAAGGGGCTATCTGATTTCAATTATGCATTGGACTTGGGC
TTCCTGACAAAAGCTAGGAAATACACATTTTTCAAGCCAAAGTTTATCTT
TTATGCCACATATTTATCTGAGAAGATTGGATACCTGGAGATACATTACC
ATATACAGACATCTCAAGGCCAACCCTGAGTTCCAATGTTATCCCATTTT
CAAGTATTTTGAGAACTGGTGCCAGGATGAGAACCGTCACGGTGATTTCT
TCTCAGCCTTGATGAAGGCACAACCCCAGTTCCTCAATGACTGGAAGGCA
AAGTTGTGGGCCCGATTTTTCTGCCTCTCGGTGTATGTCACAATGTATCT
CAATGACTGCCAGCGTACTGCTTTCTATGAGGGCATTGGACTAGACACCA
AAGAATTTGACATGCATGTCATCATTGAGACCAATCGCACAACGGCTAGA
ATTTTCCCTGCTGTGCTGGATGTTGAAAACCCAGAGTTCA
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