CK739715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739715 vs. ExPASy Swiss-Prot
Match: UBP14_ARATH (Ubiquitin carboxyl-terminal hydrolase 14 OS=Arabidopsis thaliana GN=UBP14 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 9.357e-41 Identity = 72/105 (68.57%), Postives = 81/105 (77.14%), Query Frame = 1 Query: 61 KASGGDIEKATDWIFNNPXXXXXXXXXXXXXXXXQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDTKGGASVDPPKEMGYLYFFERLN 375 KASGGDIEKATDW+FNNP QTPA +GLPDGGGKY+LFGIVSH+GTS CGHYVAHILK+GRW IFND K G S DPPK+MGY+YFF+RL+ Sbjct: 694 KASGGDIEKATDWVFNNPNASVSDMDVSSSNSA-QTPAQSGLPDGGGKYKLFGIVSHMGTSVHCGHYVAHILKEGRWVIFNDDKVGISTDPPKDMGYVYFFQRLD 797 HSP 2 Score: 31.9574 bits (71), Expect = 9.357e-41 Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = 3 Query: 6 VETLLSFGFSEEVARNAFEGIG 71 V+TLLSFGF+E+VAR A + G Sbjct: 676 VDTLLSFGFAEDVARKALKASG 697
BLAST of CK739715 vs. ExPASy Swiss-Prot
Match: UBP5_PONAB (Ubiquitin carboxyl-terminal hydrolase 5 OS=Pongo abelii GN=UBP5 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.826e-21 Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 61 KASGGDIEKATDWIFNN-------PXXXXXXXXXXXXXXXXQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDTKGGASVDPPKEMGYLYFFERLNS 378 +A+ +E+A DWIF++ P + DG GKY+LF +SH+GTST CGHYV HI K+GRW I+ND K AS PPK++GY+YF++R+ S Sbjct: 746 RATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAADSISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCASEKPPKDLGYIYFYQRVAS 858
BLAST of CK739715 vs. ExPASy Swiss-Prot
Match: UBP5_HUMAN (Ubiquitin carboxyl-terminal hydrolase 5 OS=Homo sapiens GN=USP5 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 5.826e-21 Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 61 KASGGDIEKATDWIFNN-------PXXXXXXXXXXXXXXXXQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDTKGGASVDPPKEMGYLYFFERLNS 378 +A+ +E+A DWIF++ P + DG GKY+LF +SH+GTST CGHYV HI K+GRW I+ND K AS PPK++GY+YF++R+ S Sbjct: 746 RATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAADSISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCASEKPPKDLGYIYFYQRVAS 858
BLAST of CK739715 vs. ExPASy Swiss-Prot
Match: UBP5_MOUSE (Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus GN=Usp5 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.609e-21 Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 61 KASGGDIEKATDWIFNN-------PXXXXXXXXXXXXXXXXQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDTKGGASVDPPKEMGYLYFFERLNS 378 +A+ +E+A DWIF++ P + DG GKY+LF +SH+GTST CGHYV HI K+GRW I+ND K AS PPK++GY+YF++R+ S Sbjct: 746 RATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAAESISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCASEKPPKDLGYIYFYQRVVS 858
BLAST of CK739715 vs. ExPASy Swiss-Prot
Match: UBP13_HUMAN (Ubiquitin carboxyl-terminal hydrolase 13 OS=Homo sapiens GN=USP13 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.099e-19 Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = 1 Query: 61 KASGGDIEKATDWIFNNPXXXXXXXXXXXXXXXXQT-------PADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDTKGGASVDPPKEMGYLYFFERLNS 378 +A+ ++E+A DWIF++P P + DG G Y LF +SH+GTST GHY+ HI K+GRW I+ND K AS PPK++GY+YF+ R+ S Sbjct: 751 RATNNNLERALDWIFSHPEFEEDSDFVIEMENNANANIISEAKPEGPRVKDGSGTYELFAFISHMGTSTMSGHYICHIKKEGRWVIYNDHKVCASERPPKDLGYMYFYRRIPS 863
BLAST of CK739715 vs. ExPASy Swiss-Prot
Match: UBPA_DICDI (Ubiquitin carboxyl-terminal hydrolase A OS=Dictyostelium discoideum GN=ubpA PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.533e-16 Identity = 45/121 (37.19%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 31 SQKKLLGMHSKASGGDIEKATDWIFNN--------PXXXXXXXXXXXXXXXXQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDTKGGASVDPPKEMGYLYFFER 369 SQ KL ++K G++E+A DW+F++ T + + DG GKY L G +SH+G + CGHYV HI K+ RW FND S PPKE+GY+YF++R Sbjct: 717 SQAKLALKNTK---GNLERAADWLFSHIDNLDELVAKDNASTSSINPSLIPQSTTSLQPVSDGVGKYELLGFISHLGNNVTCGHYVCHIKKNNRWIKFNDRHVQLSEQPPKELGYIYFYKR 834 The following BLAST results are available for this feature:
BLAST of CK739715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739715 ID=CK739715; Name=CK739715; organism=Citrus sinensis; type=EST; length=641bpback to top |