CK739730

Overview
NameCK739730
Unique NameCK739730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length475
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1379 contig Csv1_Contig1379:16..490. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739730 vs. ExPASy Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 9.132e-31
Identity = 63/145 (43.45%), Postives = 88/145 (60.69%), Query Frame = 3
Query:   42 AKNMTLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEM 473
            A+  +L G+LETE+E K SA  FH + + RPHH S  TPD + G ELHEG+WGK G+++ W Y HDG                N  TFKV+EG L+++Y SF  T+Q  PK GE   +A W ++YEK SE+V  P+ ++   +E+
Sbjct:    2 AEASSLVGKLETEVEIKASAKKFHHMFTERPHHVSKATPDKIHGCELHEGDWGKVGSIVIWKYVHDGKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPKQGESGSIAHWHLEYEKISEEVAHPETLLQFCVEI 146          
BLAST of CK739730 vs. ExPASy Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.458e-28
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 3
Query:   45 KNMTLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEM 473
            ++ +L G+LET++E K SA  FH + + RPHH S  TP  +QG ELHEG+WGK G+++ W Y HDG                N  TF+VIEG LL +Y SF +T+Q  PK G    +  W ++YEK  + V  P+  ++  +E+
Sbjct:   16 ESSSLCGKLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVGSIVFWNYVHDGEAKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVEYEKIDDKVAHPETFLDFCVEV 159          
BLAST of CK739730 vs. ExPASy Swiss-Prot
Match: MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.105e-27
Identity = 55/141 (39.01%), Postives = 84/141 (59.57%), Query Frame = 3
Query:   54 TLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEM 473
            +L G+LET++E K SA  FH + + +PHH S  +P ++QG +LHEG+WG  G+++ W Y HDG                N  TF+VIEG L+ +Y SF +T+Q  PK G    +  W ++YEK SE+V  P+ ++   +E+
Sbjct:   21 SLVGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEVAHPETLLQFCVEV 161          

HSP 2 Score: 117.857 bits (294), Expect = 2.328e-26
Identity = 53/141 (37.59%), Postives = 84/141 (59.57%), Query Frame = 3
Query:   54 TLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEM 473
            +L G+LET++E K SA  FH + + +PHH S  +P ++QG +LHEG+WG+ G+++ W Y HD                 N  TF+VI+G L+ +Y SF +T+Q  PK G    +  W ++YEK SE+V  P+ ++   +E+
Sbjct:  183 SLVGKLETDVEIKASAEKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGQVGSIVFWNYVHDREAKVAKERIEAVEPNKNLITFRVIDGDLMKEYKSFLLTIQVTPKLGGPGSIVHWHLEYEKISEEVAHPETLLQFCVEV 323          
BLAST of CK739730 vs. ExPASy Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 6.125e-27
Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 3
Query:   54 TLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEM 473
            +L G+LETE+E K SA  FH + + +PHH S  +P ++Q  +LHEG+WG  G+++ W Y HDG                N  TF+VIEG L+ +Y SF +T+Q  PK G    +  W ++YEK S++V  P+ ++   +E+
Sbjct:    8 SLVGKLETEVEIKASAGQFHHMFAGKPHHVSKASPGNIQSCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPEKNLITFRVIEGDLMKEYKSFLITIQVTPKHGGPGSIVHWHLEYEKISDEVAHPETLLQFCVEV 148          

HSP 2 Score: 119.783 bits (299), Expect = 6.125e-27
Identity = 56/151 (37.09%), Postives = 85/151 (56.29%), Query Frame = 3
Query:   24 EYLF*SAKNMTLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEM 473
            E+L    + +  +  LETE+E K SA  FH + + +PHH S  TP ++Q  +LHEG+WG  G+++ W Y HDG                N  TF+VIEG L+ +Y SF +T+Q  PK G    +  W  +YEK +E+V  P+ ++  A+E+
Sbjct:  154 EHLLSEEEEVKTTETLETEVEIKASAEKFHHMFAGKPHHVSKATPGNIQSCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSGSVVHWHFEYEKINEEVAHPETLLQFAVEV 304          
BLAST of CK739730 vs. ExPASy Swiss-Prot
Match: ML328_ARATH (MLP-like protein 328 OS=Arabidopsis thaliana GN=MLP328 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.566e-12
Identity = 41/145 (28.28%), Postives = 68/145 (46.90%), Query Frame = 3
Query:   51 MTLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPKGEHSCLARWTIKYEKKSEDVPDPQG----IVNLAIEM 473
            M  SG   TE+  K SA   +       H F +    H+QGV +H+GEW   G +  W Y  DG                 + TF+ +EGH++++   + V  Q I K     + + T+ +EK+++D+P+P      + +LA +M
Sbjct:    1 MATSGTYVTEVPLKGSAEKHYKRWRSENHLFPDAIGHHIQGVTIHDGEWDSHGAIKIWNYTCDG-KPEVFKERREIDDENMAVTFRGLEGHVMEQLKVYDVIFQFIQKSPDDIICKITMIWEKQNDDMPEPSNYMKFVKSLAADM 144          
BLAST of CK739730 vs. ExPASy Swiss-Prot
Match: ML168_ARATH (MLP-like protein 168 OS=Arabidopsis thaliana GN=MLP168 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.240e-11
Identity = 41/139 (29.50%), Postives = 70/139 (50.36%), Query Frame = 3
Query:   57 LSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIE 470
            +  ++E ++E K +A  F  + S R  H S  T  +VQG +L EGEWG+ G+++ W    DG                N   ++V+EG L ++Y+ F  T++  PK G    + +W +KYE+  E V   + ++   +E
Sbjct:    2 VEAEVEVDVEIKSTADKFF-MFSRRSQHASKATR-YVQGCDLLEGEWGEVGSILLWKLTVDGEPKVSKDMIEAIDMKMNMIQWRVLEGPLKEEYNIFSKTMKVSPKQGGSGSVVKWNLKYERIDEKVAHLERLLQFFVE 138          
BLAST of CK739730 vs. ExPASy Swiss-Prot
Match: ML165_ARATH (MLP-like protein 165 OS=Arabidopsis thaliana GN=MLP165 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.115e-11
Identity = 39/138 (28.26%), Postives = 68/138 (49.28%), Query Frame = 3
Query:   66 QLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAI-PK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEM 473
            ++E +++ K  A  FH  +  R  H    T  +++G +L EGEWGK G+++ W    DG                N    +V+EG L  +Y SF  T++ + PK G    + +W +KYE+  ++V  P  ++   +E+
Sbjct:    5 EIEVDVDIKTRADKFHKFIR-RSQHVPKAT-HYIKGCDLLEGEWGKVGSILLWKLVFDGEPRVSKDMIEVIDEEKNVIQLRVLEGPLKKEYKSFLKTMKVMSPKHGGPGSVVKWNMKYERIDQNVDHPNRLLQFFVEV 140          
The following BLAST results are available for this feature:
BLAST of CK739730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MLP43_ARATH9.132e-3143.45MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP... [more]
MLP31_ARATH1.458e-2840.28MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP... [more]
MLP28_ARATH2.105e-2739.01MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP... [more]
MLP34_ARATH6.125e-2738.30MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP... [more]
ML328_ARATH5.566e-1228.28MLP-like protein 328 OS=Arabidopsis thaliana GN=ML... [more]
ML168_ARATH1.240e-1129.50MLP-like protein 168 OS=Arabidopsis thaliana GN=ML... [more]
ML165_ARATH2.115e-1128.26MLP-like protein 165 OS=Arabidopsis thaliana GN=ML... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6119 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739730 ID=CK739730; Name=CK739730; organism=Citrus sinensis; type=EST; length=475bp
GAAAGTACTTATCATTTCCTTGTGAATATCTATTTTAATCCGCTAAAAAC
ATGACCCTATCTGGTCAGTTGGAGACTGAATTAGAGGCCAAGGTTTCGGC
TAGTATTTTTCATGATGTGCTTAGCTGCAGGCCACACCATTTCTCCAATA
TGACTCCTGATCATGTACAAGGTGTTGAACTGCACGAAGGTGAATGGGGA
AAACCAGGCACTGTCATTACCTGGACTTATAAGCATGATGGGGTTACAGA
AATTGCCAAGGAGATAATTGAAGAAATAGATGACGAAAAGAACTCGACAA
CTTTTAAAGTAATTGAAGGGCATCTACTGGACAAGTACAGCAGCTTCTAT
GTTACCGTTCAAGCCATTCCGAAGGGTGAACATAGTTGCTTGGCTCGTTG
GACTATCAAGTATGAGAAGAAGAGCGAGGACGTGCCTGATCCCCAAGGAA
TTGTAAATTTGGCAATCGAAATGAC
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