CK739739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739739 vs. ExPASy Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 2.487e-36 Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 2 Query: 320 SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKGAESLELPCKYY 526 SV+ELLECPVCTNSMYPPIHQCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEK AESLELPCKYY Sbjct: 39 SVYELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY 107
BLAST of CK739739 vs. ExPASy Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.612e-35 Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 2 Query: 320 SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKGAESLELPCKY 523 SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEK AESLELPCK+ Sbjct: 56 SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKH 123
BLAST of CK739739 vs. ExPASy Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.001e-35 Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = 2 Query: 320 SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKGAESLELPCKYY 526 SV+ELLECPVCT SMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEK AESLELPCK+Y Sbjct: 57 SVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFY 125
BLAST of CK739739 vs. ExPASy Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 6.560e-29 Identity = 55/67 (82.09%), Postives = 60/67 (89.55%), Query Frame = 2 Query: 323 VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKGAESLELPCKY 523 V+ELLECPVCTN MYPPIHQC NGHTLCS+CK RV N CPTCR ELG+IRCLALEK AESLE+PC+Y Sbjct: 51 VYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRY 117
BLAST of CK739739 vs. ExPASy Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.568e-29 Identity = 55/67 (82.09%), Postives = 59/67 (88.06%), Query Frame = 2 Query: 323 VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKGAESLELPCKY 523 V+ELLECPVCTN MYPPIHQC NGHTLCS CK RV N CPTCR ELG+IRCLALEK AESLE+PC+Y Sbjct: 54 VYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRY 120
BLAST of CK739739 vs. ExPASy Swiss-Prot
Match: SIAH1_RAT (E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus GN=Siah1 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 4.564e-14 Identity = 35/64 (54.69%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 332 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKGAESLELPCKY 523 L ECPVC + + PPI QC +GH +CS C+ ++ CPTCR LG IR LA+EK A S+ PCKY Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKY 100
BLAST of CK739739 vs. ExPASy Swiss-Prot
Match: SIAH1_HUMAN (E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens GN=SIAH1 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 4.564e-14 Identity = 35/64 (54.69%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 332 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKGAESLELPCKY 523 L ECPVC + + PPI QC +GH +CS C+ ++ CPTCR LG IR LA+EK A S+ PCKY Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKY 100
BLAST of CK739739 vs. ExPASy Swiss-Prot
Match: SIAH1_DANRE (E3 ubiquitin-protein ligase Siah1 OS=Danio rerio GN=siah1 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 4.564e-14 Identity = 35/64 (54.69%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 332 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKGAESLELPCKY 523 L ECPVC + + PPI QC +GH +CS C+ ++ CPTCR LG IR LA+EK A S+ PCKY Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKY 100
BLAST of CK739739 vs. ExPASy Swiss-Prot
Match: SIA1A_MOUSE (E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus GN=Siah1a PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.564e-14 Identity = 35/64 (54.69%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 332 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKGAESLELPCKY 523 L ECPVC + + PPI QC +GH +CS C+ ++ CPTCR LG IR LA+EK A S+ PCKY Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKY 100
BLAST of CK739739 vs. ExPASy Swiss-Prot
Match: SINL6_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g37870 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.961e-14 Identity = 28/65 (43.08%), Postives = 45/65 (69.23%), Query Frame = 2 Query: 329 ELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKGAESLELPCKY 523 ++L+CP+C ++ P+ QC NGH CS+C ++ N+CP C +G IRC A+E+ ES+ +PC+Y Sbjct: 41 DILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRY 105 The following BLAST results are available for this feature:
BLAST of CK739739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739739 ID=CK739739; Name=CK739739; organism=Citrus sinensis; type=EST; length=528bpback to top |