CK739745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A1_ARATH (Probable histone H2A.1 OS=Arabidopsis thaliana GN=At1g51060 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.178e-26 Identity = 58/64 (90.62%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADE 256 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTG S A D+ Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASKPSAEDD 132
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A3_ARATH (Probable histone H2A.3 OS=Arabidopsis thaliana GN=At4g27230 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.844e-25 Identity = 58/65 (89.23%), Postives = 60/65 (92.31%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADED 259 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK G+ SK +ED Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGS--SKPTEED 131
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A7_WHEAT (Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 2.409e-25 Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADEDS 262 GNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIA+GGVMPNIHNLLLPKK G S + AAD+DS Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSRLLGMVTIASGGVMPNIHNLLLPKKAGGSKAVAADDDS 134
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A2_ARATH (Probable histone H2A.2 OS=Arabidopsis thaliana GN=At3g20670 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.409e-25 Identity = 58/65 (89.23%), Postives = 60/65 (92.31%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADED 259 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIH+LLLPKK G S +ADED Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGAS-KPSADED 132
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A3_ORYSJ (Probable histone H2A.3 OS=Oryza sativa subsp. japonica GN=Os08g0427700 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.146e-25 Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADED 259 GNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIANGGVMPNIHNLLLPKK G+S AA +D Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKAGSSAKAAAADD 133
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A3_ORYSI (Probable histone H2A.3 OS=Oryza sativa subsp. indica GN=OsI_028288 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.146e-25 Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADED 259 GNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIANGGVMPNIHNLLLPKK G+S AA +D Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKAGSSAKAAAADD 133
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A6_ARATH (Histone H2A.6 OS=Arabidopsis thaliana GN=RAT5 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.008e-25 Identity = 55/57 (96.49%), Postives = 55/57 (96.49%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTS 235 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK G S Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGAS 125
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A2_ORYSJ (Probable histone H2A.2 OS=Oryza sativa subsp. japonica GN=Os07g0545400 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.561e-24 Identity = 55/65 (84.62%), Postives = 58/65 (89.23%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADED 259 GNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIA+GGVMPNIHNLLLPKK G S AA +D Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAGGSAKAAAGDD 133
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A2_ORYSI (Probable histone H2A.2 OS=Oryza sativa subsp. indica GN=OsI_025469 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.561e-24 Identity = 55/65 (84.62%), Postives = 58/65 (89.23%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADED 259 GNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIA+GGVMPNIHNLLLPKK G S AA +D Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAGGSAKAAAGDD 133
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A8_ORYSI (Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.022e-23 Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADED 259 GNAARDNKKTRIVPRHIQLAVRNDEEL+KLLG TIA+GGVMPNIH LLPKK G+S + AD+D Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSKASHADDD 133 The following BLAST results are available for this feature:
BLAST of CK739745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739745 ID=CK739745; Name=CK739745; organism=Citrus sinensis; type=EST; length=359bpback to top |