CK739750

Overview
NameCK739750
Unique NameCK739750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK739750_ssr17 microsatellite CK739750_ssr17:17..28. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1150 contig Csv1_Contig1150:388..940. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK33_ARATH (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 7.934e-52
Identity = 101/146 (69.18%), Postives = 113/146 (77.40%), Query Frame = 3
Query:   60 EPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSG---SRALPDXXXXXXXXXXXXXXXXGTLPVRASAVAHHPN 488
            EPEAKRWK + E+ G +  GS+TVREPR+VVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCT  GCPVRKHVERASHD+RAVITTYEGKHNHDVPAARGSG   +RA  D                 ++P+R +A+A H N
Sbjct:  322 EPEAKRWKGDNETNGGNGGGSKTVREPRIVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTIGCPVRKHVERASHDMRAVITTYEGKHNHDVPAARGSGYATNRAPQD---------------SSSVPIRPAAIAGHSN 452          

HSP 2 Score: 81.6481 bits (200), Expect = 2.666e-15
Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 3
Query:  180 DDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVIT--TYEGKHNHDVP 359
            +DGY WRKYGQK VKG+ NPRSYYKCT P CP +K VER+   L   IT   Y+G HNH  P
Sbjct:  184 EDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERS---LEGQITEIVYKGSHNHPKP 242          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.733e-44
Identity = 84/106 (79.25%), Postives = 93/106 (87.74%), Query Frame = 3
Query:   57 DEPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGS 374
            DE E+KR K+E  +  +S   +R +REPRVVVQTTSD+DILDDGYRWRKYGQKVVKGNPNPRSYYKCT PGC VRKHVERASHDL++VITTYEGKHNHDVPAAR S
Sbjct:  447 DESESKRRKLEAFAAEMSG-STRAIREPRVVVQTTSDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTAPGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNS 551          

HSP 2 Score: 77.411 bits (189), Expect = 5.028e-14
Identity = 38/67 (56.72%), Postives = 45/67 (67.16%), Query Frame = 3
Query:  180 DDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNH-DVPAARGSG 377
            +DGY WRKYGQK+VKG+  PRSYYKCT+P C V+K VER S +       Y+G HNH   P  R SG
Sbjct:  273 EDGYNWRKYGQKLVKGSEYPRSYYKCTNPNCQVKKKVER-SREGHITEIIYKGAHNHLKPPPNRRSG 338          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.658e-41
Identity = 78/116 (67.24%), Postives = 95/116 (81.90%), Query Frame = 3
Query:   42 DDFDEDEPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRAL 389
            D+ D+D+P +KR ++EG  E    P  + +REPRVVVQT S++DILDDGYRWRKYGQKVV+GNPNPRSYYKCT  GCPVRKHVERASHD +AVITTYEGKH+HDVP ++ S +  +
Sbjct:  337 DEPDDDDPFSKRRRMEGAME--ITPLVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTAHGCPVRKHVERASHDPKAVITTYEGKHDHDVPTSKSSSNHEI 450          

HSP 2 Score: 82.8037 bits (203), Expect = 1.197e-15
Identity = 41/73 (56.16%), Postives = 47/73 (64.38%), Query Frame = 3
Query:  174 ILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNH--DVPAARGSGSRA 386
            + DDGY WRKYGQK VKG+  PRSYYKCTHP C V+K  ER SHD +     Y+G H+H    P  R SG  A
Sbjct:  209 LADDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFER-SHDGQITDIIYKGTHDHPKPQPGRRNSGGMA 280          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRKY4_ARATH (Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 3.127e-40
Identity = 78/113 (69.03%), Postives = 90/113 (79.65%), Query Frame = 3
Query:   51 DEDEPEAKRWKIEGE-SEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRA 386
            DE+EP+ KR   E   SE   A   RTV EPR++VQTTS++D+LDDGYRWRKYGQKVVKGNP PRSYYKCT PGC VRKHVERA+ D +AV+TTYEGKHNHD+PAA+ S   A
Sbjct:  365 DENEPDPKRRSTEVRISEPAPAASHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPAAKSSSHAA 477          

HSP 2 Score: 87.4261 bits (215), Expect = 4.858e-17
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 3
Query:  180 DDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSR 383
            DDGY WRKYGQK VKG+  PRSYYKCT+PGCPV+K VER S D +     Y+G+HNH+ P     G++
Sbjct:  229 DDGYNWRKYGQKQVKGSEFPRSYYKCTNPGCPVKKKVER-SLDGQVTEIIYKGQHNHEPPQNTKRGNK 295          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRKY3_ARATH (Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 6.967e-40
Identity = 77/114 (67.54%), Postives = 88/114 (77.19%), Query Frame = 3
Query:   54 EDEPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRALPD 395
            EDEP+ KR   E       A   RTV EPR++VQTTS++D+LDDGYRWRKYGQKVVKGNP PRSYYKCT P C VRKHVERA+ D +AV+TTYEGKHNHDVPAAR S  +  P+
Sbjct:  373 EDEPDPKRRNTEVRVSEPVASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPDCGVRKHVERAATDPKAVVTTYEGKHNHDVPAARTSSHQLRPN 486          

HSP 2 Score: 92.4337 bits (228), Expect = 1.510e-18
Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 3
Query:  180 DDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGS 380
            DDGY WRKYGQK VKG+  PRSYYKCTHP CPV+K VER S D +     Y+G+HNH++P  RG+ +
Sbjct:  250 DDGYNWRKYGQKQVKGSDFPRSYYKCTHPACPVKKKVER-SLDGQVTEIIYKGQHNHELPQKRGNNN 315          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK58_ARATH (Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.516e-39
Identity = 77/115 (66.96%), Postives = 90/115 (78.26%), Query Frame = 3
Query:   42 DDFDEDEPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRA 386
            D+ DED P +K  +I+G S        RTV EP+++VQT S++D+LDDGYRWRKYGQKVVKGNP+PRSYYKCT P C VRKHVERAS D +AVITTYEGKHNHDVPAAR   + A
Sbjct:  265 DEDDEDLPASKIRRIDGVSTT-----HRTVTEPKIIVQTKSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTTPNCTVRKHVERASTDAKAVITTYEGKHNHDVPAARNGTAAA 374          

HSP 2 Score: 83.9593 bits (206), Expect = 5.372e-16
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 3
Query:  180 DDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPA-ARGSGSR 383
            DDGY WRKYGQK +KG   PRSYYKCTH  CPV+K VER+S D +     Y+G+H+H+ P   RG G R
Sbjct:  167 DDGYNWRKYGQKPIKGCEYPRSYYKCTHVNCPVKKKVERSS-DGQITQIIYKGQHDHERPQNRRGGGGR 234          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK25_ARATH (Probable WRKY transcription factor 25 OS=Arabidopsis thaliana GN=WRKY25 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 5.898e-39
Identity = 74/107 (69.16%), Postives = 88/107 (82.24%), Query Frame = 3
Query:   45 DFDEDEPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAA 365
            D +E++PE KR K EGE EG+S   S+ V+EPRVVVQT SDID+L DG+RWRKYGQKVVKGN NPRSYYKCT  GC V+K VER++ D RAV+TTYEG+HNHD+P A
Sbjct:  283 DEEEEQPEMKRMKREGEDEGMSIEVSKGVKEPRVVVQTISDIDVLIDGFRWRKYGQKVVKGNTNPRSYYKCTFQGCGVKKQVERSAADERAVLTTYEGRHNHDIPTA 389          

HSP 2 Score: 72.7886 bits (177), Expect = 1.238e-12
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 3
Query:  123 RTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVP 359
            R ++ P  +V   S+     DGY WRKYGQK VK + NPRSY+KCT+P C  +K VE AS D +     Y+G HNH  P
Sbjct:  152 RQIKIPAYMVSRNSN-----DGYGWRKYGQKQVKKSENPRSYFKCTYPDCVSKKIVETAS-DGQITEIIYKGGHNHPKP 224          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 2.927e-38
Identity = 77/108 (71.30%), Postives = 81/108 (75.00%), Query Frame = 3
Query:   45 DFDEDEPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAAR 368
            D  EDE EAKRWK E             V+EPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCT  GC VRKHVERA  D ++VITTYEGKH H +P  R
Sbjct:  200 DIGEDETEAKRWKRE-----------ENVKEPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTFTGCFVRKHVERAFQDPKSVITTYEGKHKHQIPTPR 296          

HSP 2 Score: 79.7221 bits (195), Expect = 1.013e-14
Identity = 40/96 (41.67%), Postives = 54/96 (56.25%), Query Frame = 3
Query:  138 PRVVVQTTSDIDIL-----------DDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVP-AARGSGSRAL 389
            P +V Q    +D+            DDGY WRKYGQK VKG+ NPRSY+KCT+P C  +K VE +    + +   Y+G HNH  P + + S S A+
Sbjct:   92 PSMVTQPLPQLDLFKSEIMSSNKTSDDGYNWRKYGQKQVKGSENPRSYFKCTYPNCLTKKKVETSLVKGQMIEIVYKGSHNHPKPQSTKRSSSTAI 187          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK34_ARATH (Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.897e-37
Identity = 77/110 (70.00%), Postives = 86/110 (78.18%), Query Frame = 3
Query:   45 DFDEDEPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGS 374
            D + +E E+KR K+E  +   S   +R  REPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCT  GC V KHVERAS D ++V+TTY GKH H VPAAR S
Sbjct:  328 DGEVEESESKRRKLEAYATETSG-STRASREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTANGCTVTKHVERASDDFKSVLTTYIGKHTHVVPAARNS 436          

HSP 2 Score: 78.1814 bits (191), Expect = 2.947e-14
Identity = 35/60 (58.33%), Postives = 40/60 (66.67%), Query Frame = 3
Query:  180 DDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVP 359
            DDGY WRKYGQK+VKG+  PRSYYKCTHP C  +K VER S +   +   Y G H H  P
Sbjct:  178 DDGYNWRKYGQKLVKGSEYPRSYYKCTHPNCEAKKKVER-SREGHIIEIIYTGDHIHSKP 236          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRKY1_ARATH (WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.032e-31
Identity = 62/106 (58.49%), Postives = 79/106 (74.53%), Query Frame = 3
Query:   51 DEDEPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAAR 368
            D + P AKR K  G  E   +P  R+  + R+VV T +  DI++DGYRWRKYGQK VKG+P PRSYY+C+ PGCPV+KHVER+SHD + +ITTYEGKH+HD+P  R
Sbjct:  266 DYNSPTAKRRKKGGNIE--LSPVERSTNDSRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGKHDHDMPPGR 369          

HSP 2 Score: 79.7221 bits (195), Expect = 1.013e-14
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 3
Query:  174 ILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAA 365
            +++DGY WRKYGQK+VKGN   RSYY+CTHP C  +K +ER++   + V T Y G+H+H  P A
Sbjct:  109 VMEDGYNWRKYGQKLVKGNEFVRSYYRCTHPNCKAKKQLERSAGG-QVVDTVYFGEHDHPKPLA 171          
The following BLAST results are available for this feature:
BLAST of CK739750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK33_ARATH7.934e-5269.18Probable WRKY transcription factor 33 OS=Arabidops... [more]
WRKY2_ARATH2.733e-4479.25Probable WRKY transcription factor 2 OS=Arabidopsi... [more]
WRK20_ARATH1.658e-4167.24Probable WRKY transcription factor 20 OS=Arabidops... [more]
WRKY4_ARATH3.127e-4069.03Probable WRKY transcription factor 4 OS=Arabidopsi... [more]
WRKY3_ARATH6.967e-4067.54Probable WRKY transcription factor 3 OS=Arabidopsi... [more]
WRK58_ARATH4.516e-3966.96Probable WRKY transcription factor 58 OS=Arabidops... [more]
WRK25_ARATH5.898e-3969.16Probable WRKY transcription factor 25 OS=Arabidops... [more]
WRK26_ARATH2.927e-3871.30Probable WRKY transcription factor 26 OS=Arabidops... [more]
WRK34_ARATH1.897e-3770.00Probable WRKY transcription factor 34 OS=Arabidops... [more]
WRKY1_ARATH2.032e-3158.49WRKY transcription factor 1 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6139 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739750 ID=CK739750; Name=CK739750; organism=Citrus sinensis; type=EST; length=553bp
CACAGAAGAGTAAATCAGGAGGAGGAGGAGCTGGAGGAGGAGATGATTTT
GATGAAGATGAACCTGAGGCCAAAAGATGGAAAATTGAGGGTGAAAGTGA
AGGCATTTCAGCTCCTGGAAGTAGAACAGTGAGAGAACCAAGAGTTGTTG
TTCAAACCACCAGTGACATTGACATTCTAGATGATGGGTACAGATGGAGG
AAATATGGCCAAAAAGTTGTAAAGGGGAATCCAAATCCAAGGAGTTATTA
CAAGTGTACGCATCCAGGTTGTCCAGTGAGAAAGCATGTTGAGAGAGCAT
CACACGATCTTAGAGCAGTGATCACAACCTATGAGGGAAAGCACAACCAT
GATGTTCCGGCAGCTCGCGGCAGCGGCAGCAGGGCTCTGCCGGATAATAG
CAGCAATAATAACCATAACAGTAACAGCAATAGTAACAACAACGGGACAC
TGCCCGTAAGGGCATCGGCAGTGGCTCATCATCCTAACAACAACTCGATT
CTCAATCCTGTTCACAATCTGAGGGTATCCTCATCTGAAGGCCAAGCACC
CTA
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