CK739753

Overview
NameCK739753
Unique NameCK739753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10253 contig Csv1_Contig10253:985..1253. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739753 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 7.463e-43
Identity = 81/88 (92.05%), Postives = 84/88 (95.45%), Query Frame = 1
Query:    1 MTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPNELVKLVEILNPHNK 264
            MT+TEFWTSHECLLLPYEQALTR DSTSG YYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKM P+ELVKL+EILNP NK
Sbjct:  272 MTTTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMVPSELVKLIEILNPQNK 359          
BLAST of CK739753 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 3.704e-42
Identity = 79/88 (89.77%), Postives = 83/88 (94.32%), Query Frame = 1
Query:    1 MTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPNELVKLVEILNPHNK 264
            M +TEFWTSHECLLLPYEQ+LTRRDSTSG YYDCSAH LWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDP+ LVKL+EILNP NK
Sbjct:  309 MKTTEFWTSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNK 396          
BLAST of CK739753 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 3.704e-42
Identity = 77/88 (87.50%), Postives = 85/88 (96.59%), Query Frame = 1
Query:    1 MTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPNELVKLVEILNPHNK 264
            MTST+FWTSHECLLLPYEQ+LTR+DST+G +YDCSAHMLWVGERTRQLDGAHVEFLRG+ANPLGIKVSDKM+P ELVKL+EILNP NK
Sbjct:  315 MTSTDFWTSHECLLLPYEQSLTRQDSTTGHFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPTELVKLIEILNPSNK 402          
BLAST of CK739753 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 8.251e-42
Identity = 78/88 (88.64%), Postives = 82/88 (93.18%), Query Frame = 1
Query:    1 MTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPNELVKLVEILNPHNK 264
            M +TEFWTSHECLLLPYEQALTR DSTSG +YDCSAHMLWVGERTRQLDGAHVEFLRG+ANPLGIKVS KMDPNELV L+EILNP NK
Sbjct:  273 MATTEFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELVNLIEILNPTNK 360          
BLAST of CK739753 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.407e-41
Identity = 78/88 (88.64%), Postives = 83/88 (94.32%), Query Frame = 1
Query:    1 MTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPNELVKLVEILNPHNK 264
            M +TEFWTSHECLLLPYEQ+LTRRDSTSG +YDCSAH LWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDP+ LVKL+EILNP NK
Sbjct:  309 MKTTEFWTSHECLLLPYEQSLTRRDSTSGLHYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNK 396          
BLAST of CK739753 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.838e-41
Identity = 76/88 (86.36%), Postives = 84/88 (95.45%), Query Frame = 1
Query:    1 MTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPNELVKLVEILNPHNK 264
            MT+T+FWTSHECLLLPYEQ+LTR DSTSG +YDCSAHMLWVGERTRQLDGAHVEFLRG+ANPLGIKVSDKM+P +LVKL+EILNP NK
Sbjct:  300 MTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPRDLVKLIEILNPSNK 387          
BLAST of CK739753 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.401e-41
Identity = 75/88 (85.23%), Postives = 84/88 (95.45%), Query Frame = 1
Query:    1 MTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPNELVKLVEILNPHNK 264
            M++T+FWTSHECLLLPYEQALTR DSTSG +YDCSAHM+WVGERTRQLDGAHVEFLRG+ANPLGIKVS KMDPNEL+KL++ILNP NK
Sbjct:  282 MSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELIKLIDILNPANK 369          
BLAST of CK739753 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.985e-41
Identity = 76/88 (86.36%), Postives = 82/88 (93.18%), Query Frame = 1
Query:    1 MTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPNELVKLVEILNPHNK 264
            M +TEFWTSHECLLLPYEQ+LTR DSTSG YYDCSAH +WVGERTRQLDGAHVEFLRG+ANPLGIKVSDKMDP+ LVKL+EILNP NK
Sbjct:  310 MKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPSALVKLIEILNPDNK 397          
BLAST of CK739753 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.191e-40
Identity = 74/88 (84.09%), Postives = 83/88 (94.32%), Query Frame = 1
Query:    1 MTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPNELVKLVEILNPHNK 264
            M++T+FWTSHECLLLPYEQALTR DSTSG +YDCSAHM+WVGERTRQLDGAHVEFLRG+ANPLGIKVS KMDP EL+KL++ILNP NK
Sbjct:  282 MSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPKELIKLIDILNPANK 369          
BLAST of CK739753 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 3.467e-40
Identity = 77/88 (87.50%), Postives = 84/88 (95.45%), Query Frame = 1
Query:    1 MTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPNELVKLVEILNPHNK 264
            MT+T+F+TSHECLLLPYEQ+LTR DSTSG YYDCSAHM+W GERTRQLDGAHVEFLRGIANPLGIKVS+KMDP ELVKLVEILNP+NK
Sbjct:  295 MTTTDFYTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMVWCGERTRQLDGAHVEFLRGIANPLGIKVSNKMDPFELVKLVEILNPNNK 382          
The following BLAST results are available for this feature:
BLAST of CK739753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
AROG_ARATH7.463e-4392.05Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLTU3.704e-4289.77Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ORYSJ3.704e-4287.50Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_CATRO8.251e-4288.64Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]
AROG_SOLLC1.407e-4188.64Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ORYSJ1.838e-4186.36Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_SOLTU2.401e-4185.23Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_TOBAC6.985e-4186.36Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLLC1.191e-4084.09Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ARATH3.467e-4087.50Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6143 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739753 ID=CK739753; Name=CK739753; organism=Citrus sinensis; type=EST; length=269bp
ATGACATCAACAGAATTTTGGACCTCTCATGAATGCTTGCTTTTGCCTTA
TGAGCAAGCACTGACAAGACGAGATTCAACTTCTGGCCAGTACTATGACT
GCTCTGCTCACATGCTTTGGGTTGGGGAGCGTACTCGGCAGCTGGATGGT
GCCCATGTAGAGTTCCTAAGAGGAATTGCCAACCCTCTTGGCATCAAGGT
TAGCGACAAAATGGATCCAAATGAGCTAGTCAAACTTGTTGAAATCTTGA
ACCCACATAACAAGGGTGG
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