CK739754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739754 vs. ExPASy Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M-type 4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=1 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 4.214e-46 Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 14 KFAEFKGLKVRPXXXXXXXXXXXXXXXXLRRGAQIVCEAQET---AVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKGNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 460 +F EF+GLK + RG +I CEAQ+T AVEVP ++D+ WQ+ VL+S PVLVEFWAPWCGPCRMIHPI+D+L+K + GK K YK NTDESP+ A RYGIRS+PTV+IFK GEKKD++IGAVP+ TL +IE+FL Sbjct: 40 RFLEFRGLKSSRSLVTQSASLGANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191
BLAST of CK739754 vs. ExPASy Swiss-Prot
Match: TRXM_BRANA (Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 6.728e-44 Identity = 79/121 (65.29%), Postives = 102/121 (84.30%), Query Frame = 2 Query: 98 LRRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKGNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 460 LRRG I+CEAQ+TA +P V D+TW+SLVL + PV+V+FWAPWCGPC+MI PI++EL++QY GK+K +K NTD+SP+ +YG+RSIPT+MIF GEKKDT+IGAVPK+TL TSI+KFL Sbjct: 57 LRRGG-IICEAQDTATGIPMVNDSTWESLVLKADEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTDDSPATPGKYGVRSIPTIMIFVKGEKKDTIIGAVPKTTLATSIDKFL 176
BLAST of CK739754 vs. ExPASy Swiss-Prot
Match: TRXM1_ARATH (Thioredoxin M-type 1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.164e-42 Identity = 78/121 (64.46%), Postives = 97/121 (80.17%), Query Frame = 2 Query: 98 LRRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKGNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 460 LRRG ++CEAQ+TA +P V D+TW SLVL + PV V+FWAPWCGPC+MI PI++EL+++Y G+ K YK NTDESP+ +YG+RSIPT+MIF NGEKKDT+IGAV K TL TSI KFL Sbjct: 61 LRRG--VICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179
BLAST of CK739754 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 3.692e-42 Identity = 75/115 (65.22%), Postives = 96/115 (83.48%), Query Frame = 2 Query: 116 IVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKGNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 460 ++ A+E EV V D++W LV+ S +PVLV+FWAPWCGPCRMI PIIDEL+K+Y GK+KCYK NTDESP+ AT+YGIRSIPTV+ FKNGE+KD+VIGAVPK+TL+ +EK++ Sbjct: 58 VLLHAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172
BLAST of CK739754 vs. ExPASy Swiss-Prot
Match: TRXM2_ARATH (Thioredoxin M-type 2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 4.822e-42 Identity = 83/156 (53.21%), Postives = 109/156 (69.87%), Query Frame = 2 Query: 2 SGRRKFA---EFKGLKVRPXXXXXXXXXXXXXXXXLRRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKGNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 460 S RR FA E GL++R R A +VCEAQET ++ V D+TW SLVL + PV+V+FWAPWCGPC+MI P++++L++ Y GK+K YK NTDESP+ +YG+RSIPT+MIF GEKKDT+IGAVPK+TLT+S++KFL Sbjct: 31 SSRRMFAVLPESSGLRIRLSLSPASLTSIHQPRVSRLRRA-VVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185
BLAST of CK739754 vs. ExPASy Swiss-Prot
Match: TRXM_ORYSJ (Thioredoxin M-type, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.074e-41 Identity = 76/121 (62.81%), Postives = 96/121 (79.34%), Query Frame = 2 Query: 98 LRRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKGNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 460 LR ++ C+ EV + W S+VL S +PVLVEFWAPWCGPCRMI P+IDEL+K+YVGK+KC K NTD+SP+IAT YGIRSIPTV++FKNGEKK++VIGAVPK+TL T I+K++ Sbjct: 50 LRPASRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKYV 170
BLAST of CK739754 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 5.331e-41 Identity = 74/119 (62.18%), Postives = 97/119 (81.51%), Query Frame = 2 Query: 104 RGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKGNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 460 R + +VC+A E EV V D++W+ VL+S PV+V+FWAPWCGPC++I P+IDEL+K+Y GK+ YK NTDE+P IAT+Y IRSIPTV+ FKNGE+K+++IGAVPKSTLT SIEK+L Sbjct: 61 RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 179
BLAST of CK739754 vs. ExPASy Swiss-Prot
Match: TRXM_WHEAT (Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.925e-39 Identity = 72/120 (60.00%), Postives = 95/120 (79.17%), Query Frame = 2 Query: 101 RRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKGNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 460 RR ++ VC+ + EV + W ++V+ SPVLVEFWAPWCGPCRMI P+IDEL+K YVGK+KC K NTD+ P+IA+ YGIRSIPTV++FK+GEKK++VIGAVPK+TL T I+K++ Sbjct: 54 RRPSRFVCKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLCTIIDKYI 173
BLAST of CK739754 vs. ExPASy Swiss-Prot
Match: TRXM_MAIZE (Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 8.511e-39 Identity = 71/114 (62.28%), Postives = 90/114 (78.95%), Query Frame = 2 Query: 119 VCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKGNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 460 VC+++ EV + W LV+ +PVLVEFWAPWCGPCRMI P+IDEL+K Y GK+ C K NTD+SP++A+ YGIRSIPTV+IFK GEKK++VIGAVPKSTLTT I+K++ Sbjct: 51 VCQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKDYAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAVPKSTLTTLIDKYI 164
BLAST of CK739754 vs. ExPASy Swiss-Prot
Match: TRXM_CHLRE (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 3.347e-35 Identity = 63/105 (60.00%), Postives = 88/105 (83.81%), Query Frame = 2 Query: 146 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKGNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 460 E AV D T++++VL+S PVLV+FWAPWCGPCR+I P++DE++ +Y KLKC K NTDESP++A+ YGIRSIPT+M+FK G+K +T+IGAVPK+T+ ++EK+L Sbjct: 35 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 139 The following BLAST results are available for this feature:
BLAST of CK739754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739754 ID=CK739754; Name=CK739754; organism=Citrus sinensis; type=EST; length=577bpback to top |