CK739764

Overview
NameCK739764
Unique NameCK739764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length419
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1916 contig Csv1_Contig1916:492..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK739764 vs. ExPASy Swiss-Prot
Match: PGKY_TOBAC (Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 1.380e-65
Identity = 125/139 (89.93%), Postives = 137/139 (98.56%), Query Frame = 2 
Query:    2 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKGDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGGALLLP 418
            N+PEFAKKLASLADLYVNDAFG+AHRAHASTEGVAK+LKP+VAGFLMQKELDYLVGAV+NP+KPFAAIVGGSKVS+KIGVIESLLEK D+LLLGGGMIFTFYKAQG++VGSSLVEEDKLDLATSLMEKAK+KG +LLLP
Sbjct:  130 NEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPAVAGFLMQKELDYLVGAVANPQKPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGYAVGSSLVEEDKLDLATSLMEKAKAKGVSLLLP 268
[Close]
BLAST of CK739764 vs. ExPASy Swiss-Prot
Match: PGKH_SPIOL (Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 3.075e-65
Identity = 127/139 (91.37%), Postives = 133/139 (95.68%), Query Frame = 2 
Query:    2 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKGDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGGALLLP 418
            NDPEFAKKLASLADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYLVGAVSNPK+PFAAIVGGSKVS+KIGVIESLLEK DILLLGGGMIFTFYKAQG SVGSSLVEEDKLDLATSL+ KAK KG +LLLP
Sbjct:  157 NDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGMSVGSSLVEEDKLDLATSLLAKAKEKGVSLLLP 295
[Close]
BLAST of CK739764 vs. ExPASy Swiss-Prot
Match: PGKH_TOBAC (Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 5.244e-65
Identity = 126/139 (90.65%), Postives = 135/139 (97.12%), Query Frame = 2 
Query:    2 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKGDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGGALLLP 418
            N+PEFAKKLASLADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYLVGAVSNPK+PFAAIVGGSKVS+KIGVIESLLEK DILLLGGGMIFTFYKAQG SVGSSLVEEDKL+LATSL+EKAK+KG +LLLP
Sbjct:  204 NEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLEKAKAKGVSLLLP 342
[Close]
BLAST of CK739764 vs. ExPASy Swiss-Prot
Match: PGKH_WHEAT (Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.687e-63
Identity = 124/139 (89.21%), Postives = 133/139 (95.68%), Query Frame = 2 
Query:    2 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKGDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGGALLLP 418
            NDPEFAKKLASLADL+VNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYL GAVSNPK+PFAAIVGGSKVS+KIGVIESLLEK DILLLGGGMIFTFYKAQG SVGSSLVEEDKL+LATSL+ KAK+KG +LLLP
Sbjct:  201 NDPEFAKKLASLADLFVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLAKAKAKGVSLLLP 339
[Close]
BLAST of CK739764 vs. ExPASy Swiss-Prot
Match: PGKH_ARATH (Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 1.687e-63
Identity = 123/139 (88.49%), Postives = 133/139 (95.68%), Query Frame = 2 
Query:    2 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKGDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGGALLLP 418
            N+P+FAKKLASLADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYLVGAVSNPK+PFAAIVGGSKVS+KIGVIESLLEK DILLLGGGMIFTFYKAQG SVGSSLVEEDKL+LAT L+ KAK+KG +LLLP
Sbjct:  202 NEPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATELLAKAKAKGVSLLLP 340
[Close]
BLAST of CK739764 vs. ExPASy Swiss-Prot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 1.094e-62
Identity = 122/139 (87.77%), Postives = 131/139 (94.24%), Query Frame = 2 
Query:    2 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKGDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGGALLLP 418
            NDPEFAKKLAS+ADLYVNDAFG+AHRAHASTEGV KFL+PSVAGFLMQKELDYLVGAV+NPKKPFAAIVGGSKVS+KIGVIESLL K DIL+LGGGMIFTFYKAQG +VG SLVEEDKL+LATSL+E AKSKG  LLLP
Sbjct:  130 NDPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKELDYLVGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGKSLVEEDKLELATSLIETAKSKGVKLLLP 268
[Close]
BLAST of CK739764 vs. ExPASy Swiss-Prot
Match: PGKH_VOLCA (Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 4.920e-55
Identity = 110/139 (79.14%), Postives = 122/139 (87.77%), Query Frame = 2 
Query:    2 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKGDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGGALLLP 418
            NDPEFAKKLAS ADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYL GAVS PK+PF AIVGGSKVS+KI VIE L+EK D +++GGGMIFTFYKA+G  VGSSLVEEDKL+LA +L   AK+KG  LLLP
Sbjct:  191 NDPEFAKKLASNADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSAPKRPFVAIVGGSKVSSKITVIEKLMEKCDKIIIGGGMIFTFYKARGLKVGSSLVEEDKLELAKNLEAIAKAKGVQLLLP 329
[Close]
BLAST of CK739764 vs. ExPASy Swiss-Prot
Match: PGKH_CHLRE (Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 8.392e-55
Identity = 107/139 (76.98%), Postives = 123/139 (88.49%), Query Frame = 2 
Query:    2 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKGDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGGALLLP 418
            N+PEFAKKLA+ ADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYL GAVSNPK+PF AIVGGSKVS+KI VIE+L+EK D +++GGGMIFTFYKA+   VGSSLVE+DK++LA  L E AK+KG  LLLP
Sbjct:  190 NEPEFAKKLAANADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSKVSSKITVIEALMEKCDKIIIGGGMIFTFYKARALKVGSSLVEDDKIELAKKLEEMAKAKGVQLLLP 328
[Close]
BLAST of CK739764 vs. ExPASy Swiss-Prot
Match: PGK_SYNJA (Phosphoglycerate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pgk PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 7.105e-54
Identity = 105/139 (75.54%), Postives = 121/139 (87.05%), Query Frame = 2 
Query:    2 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKGDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGGALLLP 418
            NDPEFA+KLASLADL+VNDAFGSAHRAHAST GV  +L+P+VAG+L++KEL +L GA+ NP++P AAI+GGSKVSTKIGVIE LLEK D LLLGGGMIFTFY+AQG   G SLVE DKLDLA SLMEKAK++G  LLLP
Sbjct:  141 NDPEFARKLASLADLFVNDAFGSAHRAHASTAGVTAYLQPAVAGYLVEKELQFLSGAIENPQRPLAAIIGGSKVSTKIGVIERLLEKVDKLLLGGGMIFTFYQAQGIPTGKSLVETDKLDLARSLMEKAKARGVELLLP 279
[Close]
BLAST of CK739764 vs. ExPASy Swiss-Prot
Match: PGK_PROM4 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=pgk PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.212e-53
Identity = 102/139 (73.38%), Postives = 124/139 (89.21%), Query Frame = 2 
Query:    2 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKGDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGGALLLP 418
            NDP+FAK+L+ LA++YVNDAFG+AHRAHASTEGV KFL P+VAG+LM+KEL YL GA+ +PK+P AAIVGGSKVS+KIGV+ESL++K D +L+GGGMIFTFYKA+G SVG SLVE+DKL+LA +L EKAKSKG  LLLP
Sbjct:  130 NDPDFAKELSELAEVYVNDAFGAAHRAHASTEGVTKFLSPNVAGYLMEKELQYLQGAIDSPKRPLAAIVGGSKVSSKIGVLESLIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEDDKLELAKALEEKAKSKGVELLLP 268
The following BLAST results are available for this feature:
BLAST of CK739764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKY_TOBAC1.380e-6589.93Phosphoglycerate kinase, cytosolic OS=Nicotiana ta... [more]
PGKH_SPIOL3.075e-6591.37Phosphoglycerate kinase, chloroplastic (Fragment) ... [more]
PGKH_TOBAC5.244e-6590.65Phosphoglycerate kinase, chloroplastic OS=Nicotian... [more]
PGKH_WHEAT1.687e-6389.21Phosphoglycerate kinase, chloroplastic OS=Triticum... [more]
PGKH_ARATH1.687e-6388.49Phosphoglycerate kinase, chloroplastic OS=Arabidop... [more]
PGKY_WHEAT1.094e-6287.77Phosphoglycerate kinase, cytosolic OS=Triticum aes... [more]
PGKH_VOLCA4.920e-5579.14Phosphoglycerate kinase, chloroplastic OS=Volvox c... [more]
PGKH_CHLRE8.392e-5576.98Phosphoglycerate kinase, chloroplastic OS=Chlamydo... [more]
PGK_SYNJA7.105e-5475.54Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROM41.212e-5373.38Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6154 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739764 ID=CK739764; Name=CK739764; organism=Citrus sinensis; type=EST; length=419bp
GAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGATCTCTATG
TTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCACTGAGGGT
GTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCAAAAGGA
ACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACCATTTGCTG
CCATTGTTGGTGGTTCAAAGGTGTCAACTAAGATCGGTGTTATTGAATCA
CTTTTGGAGAAGGGTGACATTCTATTGCTCGGTGGAGGAATGATCTTTAC
CTTTTACAAGGCCCAAGGACACTCTGTTGGTTCATCCCTTGTTGAGGAAG
ACAAGCTTGATCTCGCTACGTCACTTATGGAGAAGGCCAAATCTAAAGGG
GGGGCTCTTCTGCTCCCTA
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