CK739771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739771 vs. ExPASy Swiss-Prot
Match: PSAH_BRARA (Photosystem I reaction center subunit VI, chloroplastic OS=Brassica rapa GN=PSAH PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.565e-43 Identity = 86/102 (84.31%), Postives = 93/102 (91.18%), Query Frame = 1 Query: 76 AVQPVT-IKGLGGSSLAGTKLTVKPTRQNLRPKSFKAGAVVAKYGDKSVYLDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 378 AVQP + +KGLGGSSL G KL +KP+RQ+ +PKS +AGAVVAKYGDKSVY DLEDLGNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILG Sbjct: 9 AVQPYSAVKGLGGSSLTGAKLFIKPSRQSFKPKSTRAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILG 110
BLAST of CK739771 vs. ExPASy Swiss-Prot
Match: PSAH2_ARATH (Photosystem I reaction center subunit VI-2, chloroplastic OS=Arabidopsis thaliana GN=PSAH2 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.662e-42 Identity = 85/102 (83.33%), Postives = 92/102 (90.20%), Query Frame = 1 Query: 76 AVQP-VTIKGLGGSSLAGTKLTVKPTRQNLRPKSFKAGAVVAKYGDKSVYLDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 378 AVQP +KGLGGSSLAG KL +KP+RQ+ + KS +AGAVVAKYGDKSVY DLEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILG Sbjct: 9 AVQPSAAVKGLGGSSLAGAKLFIKPSRQSFKTKSTRAGAVVAKYGDKSVYFDLEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILG 110
BLAST of CK739771 vs. ExPASy Swiss-Prot
Match: PSAH_SPIOL (Photosystem I reaction center subunit VI, chloroplastic OS=Spinacia oleracea GN=PSAH PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.837e-42 Identity = 80/101 (79.21%), Postives = 91/101 (90.10%), Query Frame = 1 Query: 76 AVQPVTIKGLGGSSLAGTKLTVKPTRQNLRPKSFKAGAVVAKYGDKSVYLDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 378 AVQP T+KGL GSS+AGTKL +KP RQ+ + + ++GA+VAKYGDKSVY DLED+ NTTGQWD+YGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG Sbjct: 9 AVQPTTLKGLAGSSIAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDLEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 109
BLAST of CK739771 vs. ExPASy Swiss-Prot
Match: PSAH1_ARATH (Photosystem I reaction center subunit VI-1, chloroplastic OS=Arabidopsis thaliana GN=PSAH1 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.077e-41 Identity = 83/102 (81.37%), Postives = 91/102 (89.22%), Query Frame = 1 Query: 76 AVQP-VTIKGLGGSSLAGTKLTVKPTRQNLRPKSFKAGAVVAKYGDKSVYLDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 378 AV+P IKGLGGSSLAG KL++KP+R + +PKS +A VVAKYGDKSVY DLEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILG Sbjct: 9 AVKPSAAIKGLGGSSLAGAKLSIKPSRLSFKPKSIRANGVVAKYGDKSVYFDLEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILG 110
BLAST of CK739771 vs. ExPASy Swiss-Prot
Match: PSAH_ORYSJ (Photosystem I reaction center subunit VI, chloroplastic OS=Oryza sativa subsp. japonica GN=PSAH PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.044e-36 Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 1 Query: 76 AVQPVTIKGLGGSSLAGTKLTVKPTRQNL-RPKSFKAGAVVAKYGDKSVYLDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 378 AVQPV +KGL GSS++G KL V+P+ + L R AVVAKYG+KSVY DLED+GNTTGQWDLYGSDAPSPYN LQSKFFETFA PFTKRGLLLKFL+LG Sbjct: 6 AVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRAAVVAKYGEKSVYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLG 107
BLAST of CK739771 vs. ExPASy Swiss-Prot
Match: PSAH_ORYSI (Photosystem I reaction center subunit VI, chloroplastic OS=Oryza sativa subsp. indica GN=PSAH PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.044e-36 Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 1 Query: 76 AVQPVTIKGLGGSSLAGTKLTVKPTRQNL-RPKSFKAGAVVAKYGDKSVYLDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 378 AVQPV +KGL GSS++G KL V+P+ + L R AVVAKYG+KSVY DLED+GNTTGQWDLYGSDAPSPYN LQSKFFETFA PFTKRGLLLKFL+LG Sbjct: 6 AVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRAAVVAKYGEKSVYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLG 107
BLAST of CK739771 vs. ExPASy Swiss-Prot
Match: PSAH_MAIZE (Photosystem I reaction center subunit VI, chloroplastic OS=Zea mays GN=PSAH PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.363e-36 Identity = 76/102 (74.51%), Postives = 89/102 (87.25%), Query Frame = 1 Query: 76 AVQPVTIKGLGGSSLAGTKLTV-KPTRQNLRPKSFKAGAVVAKYGDKSVYLDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 378 +V+PV IKGL GSS++G KL V +P+ +++R +A AVVAKYGDKSVY DL+D+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFL+LG Sbjct: 8 SVKPVAIKGLAGSSISGRKLAVARPSARSIRRP--RAAAVVAKYGDKSVYFDLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLG 107
BLAST of CK739771 vs. ExPASy Swiss-Prot
Match: PSAH_HORVU (Photosystem I reaction center subunit VI, chloroplastic OS=Hordeum vulgare GN=PSAH PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.479e-35 Identity = 71/103 (68.93%), Postives = 84/103 (81.55%), Query Frame = 1 Query: 76 AVQPVTIKGLGGSSLAGTKLTVKPTRQNLRPKSFKA--GAVVAKYGDKSVYLDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 378 AVQP +KGL GSS++G KL V+P+ + + +A AVVAKYG+KSVY DL+D+ NTTGQWDLYGSDAPSPYN LQSKFF TFAAPFTKRGLLLKFL++G Sbjct: 6 AVQPAAVKGLSGSSISGRKLAVRPSSAAVSRSTRRARGAAVVAKYGEKSVYFDLDDIANTTGQWDLYGSDAPSPYNGLQSKFFNTFAAPFTKRGLLLKFLLIG 108
BLAST of CK739771 vs. ExPASy Swiss-Prot
Match: PSAH_PEA (Photosystem I reaction center subunit VI (Fragment) OS=Pisum sativum GN=PSAH PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.717e-13 Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 1 Query: 199 KYGDKSVYLDLEDLGNTTGQWDLYGSDAPSPYNSLQ 306 KYGDKSVY DLED+GNTTGQWDLYGSDAPSPY+ LQ Sbjct: 1 KYGDKSVYFDLEDIGNTTGQWDLYGSDAPSPYSXLQ 36 The following BLAST results are available for this feature:
BLAST of CK739771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739771 ID=CK739771; Name=CK739771; organism=Citrus sinensis; type=EST; length=661bpback to top |