CK739778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739778 vs. ExPASy Swiss-Prot
Match: PSAN_ARATH (Photosystem I reaction center subunit N, chloroplastic OS=Arabidopsis thaliana GN=PSAN PE=1 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 4.137e-51 Identity = 108/170 (63.53%), Postives = 125/170 (73.53%), Query Frame = 1 Query: 52 NSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHK----MPVIRAQQVDVSKESRGTDGRRXXXXXXXXXXXXXXXXXXXXXXXGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSHVFWKW 549 NSSVL C+YAI+GS GS ELN K+ V++ G K MPVI+AQ+V V + G++GRR GVIDEYLERSK NKELND+KRLATSGANFARA+TVQFG+CKFPENFTGCQDLAKQKKVPFIS+D+ LEC+GKDKYKCGS+VFWKW Sbjct: 5 NSSVLTCSYAIAGS-GSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRV-VGDDVDGSNGRRSAMVFLAATLFSTAAVSASANA-GVIDEYLERSKTNKELNDKKRLATSGANFARAFTVQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW 171
BLAST of CK739778 vs. ExPASy Swiss-Prot
Match: PSAN_MAIZE (Photosystem I reaction center subunit N, chloroplastic (Fragment) OS=Zea mays GN=PSAN PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.130e-39 Identity = 71/84 (84.52%), Postives = 82/84 (97.62%), Query Frame = 1 Query: 298 VIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSHVFWKW 549 + DEYLE+SKANKELND+KRLATSGANFARAYTV+FG+C+FP NFTGCQDLAKQKKVPFISDDLE+EC+GK+K+KCGS+VFWKW Sbjct: 29 IFDEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKFKCGSNVFWKW 112
BLAST of CK739778 vs. ExPASy Swiss-Prot
Match: PSAN_HORVU (Photosystem I reaction center subunit N, chloroplastic OS=Hordeum vulgare GN=PSAN PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.092e-39 Identity = 71/84 (84.52%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 298 VIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSHVFWKW 549 V DEYLE+SK NKELND+KR ATSGANFARAYTVQFG+CKFP NFTGCQDLAKQKKVPFI+DDLE+EC+GK+K+KCGS+VFWKW Sbjct: 62 VFDEYLEKSKLNKELNDKKRAATSGANFARAYTVQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW 145
BLAST of CK739778 vs. ExPASy Swiss-Prot
Match: PSAN_VOLCA (Photosystem I reaction center subunit N, chloroplastic OS=Volvox carteri GN=PSAN PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.298e-20 Identity = 46/79 (58.23%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 295 GVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGS 531 GV+++ L +S ANK LN++KRLATS AN AR+ TV GTC+FPENF GC++LA K V +I++DL++EC+GKD CGS Sbjct: 54 GVVEDLLAKSAANKALNNKKRLATSYANLARSRTVYDGTCQFPENFFGCEELAFNKGVKYIAEDLKIECEGKDAKSCGS 132 The following BLAST results are available for this feature:
BLAST of CK739778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739778 ID=CK739778; Name=CK739778; organism=Citrus sinensis; type=EST; length=639bpback to top |