CK739781

Overview
NameCK739781
Unique NameCK739781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length579
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1707 contig Csv1_Contig1707:125..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739781 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 6.931e-57
Identity = 110/192 (57.29%), Postives = 134/192 (69.79%), Query Frame = 2
Query:    2 KKQELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPID 577
            K+  L+HL F+RIA I  L  VS+LY+YAK+NSGPL+S V  VE AVT VV PVYQKFK VP            E S KFDEHAPP+AK+V +Q H LI  A++KAQ+ V EA+TGGP+AA +YAA E K  +VTNSVK W KLN Y   H M D A+P AA +S +YN LV +MT  GY++ GYLPLVP+D
Sbjct:    9 KEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVD 200          
BLAST of CK739781 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 8.531e-31
Identity = 79/207 (38.16%), Postives = 111/207 (53.62%), Query Frame = 2
Query:    2 KKQELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGGPRAAVH------YAAAE-------SKHLLVTN--SVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPID 577
            +++ L++L F+++AAI  +VC SSLY+YAK NSGPL+  V TVE  V  V+GPVY+KF  VP             +  + + H P L KR + Q  ++ + A + A  + SE Q  G            Y+  E       SK+  V    +V AW  LN   LF  +A + VPTAA WS+KYN  V    ++GYTV  YLPL+P +
Sbjct:   16 EEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTE 222          
BLAST of CK739781 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.828e-28
Identity = 78/209 (37.32%), Postives = 110/209 (52.63%), Query Frame = 2
Query:    2 KKQELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGG-----------------PRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPID 577
            +K+ L++L F++ AA++AL+  + +Y  AK  SGPL+  V +VE AV  VVGPVY+K+  VP             +  + D   PP+ K+V++Q  S  + A   A+ L SE +  G                 P A   YA  E K      +V AW KLN   LF  +A +AVPTAA  S+KYN  VV+  +KGY V  Y+PLVP +
Sbjct:   18 EKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPK--AEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTE 224          
BLAST of CK739781 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.319e-23
Identity = 71/201 (35.32%), Postives = 105/201 (52.24%), Query Frame = 2
Query:    2 KKQELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXEASRKFDEHAPP-------LAKRVASQVH--SLIETASQKAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPID 577
            +++ LR+L F++ AA Q LV  ++ Y YAK+ +GPLR  V  VE  V AVVGPVY +F GVP            E+ ++ D   PP       LA+  A++V    L+ TA+  A++ ++ A+   PRA   Y   E   +    + +AW  LN   L  ++    +P AA  S +YN  V +  K+G  V  YLPLVP +
Sbjct:   31 EEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAE---PRARDLYTRYEP--VAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTE 226          
BLAST of CK739781 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.319e-23
Identity = 71/201 (35.32%), Postives = 105/201 (52.24%), Query Frame = 2
Query:    2 KKQELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXEASRKFDEHAPP-------LAKRVASQVH--SLIETASQKAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPID 577
            +++ LR+L F++ AA Q LV  ++ Y YAK+ +GPLR  V  VE  V AVVGPVY +F GVP            E+ ++ D   PP       LA+  A++V    L+ TA+  A++ ++ A+   PRA   Y   E   +    + +AW  LN   L  ++    +P AA  S +YN  V +  K+G  V  YLPLVP +
Sbjct:   31 EEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAE---PRARDLYTRYEP--VAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTE 226          
BLAST of CK739781 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.783e-20
Identity = 61/168 (36.31%), Postives = 83/168 (49.40%), Query Frame = 2
Query:   74 LYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPID 577
            LY YAK  +GPL+  V TVE AV  VV PVY +F  VP            E     D H P   K+V+SQ           A+++VSE +  G         ++ +      +V AW KLN   LF  +A+  +P AA  ++KYN ++V   +KGY V  YLPLVP +
Sbjct:    6 LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHVPSNVKKVSSQ-----------ARSVVSEVRRDGVSTFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTE 158          
BLAST of CK739781 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.329e-20
Identity = 61/192 (31.77%), Postives = 98/192 (51.04%), Query Frame = 2
Query:    2 KKQELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPID 577
            +++ L++L F+R A + A+   S+LY YAK  SGPL+  V T+E+ V  VV PVY     +P             +    D   PP+ K+V++Q +S+ + A +   ++ S     G +       A  +      +V  W  LN   L   +A++ VPTA  +S+KYN +V   T++GY V  YLPL+P +
Sbjct:    6 EEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVYY----IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGVQEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTE 193          
BLAST of CK739781 vs. ExPASy Swiss-Prot
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.849e-20
Identity = 57/196 (29.08%), Postives = 94/196 (47.96%), Query Frame = 2
Query:    5 KQELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXEASRKFDEHAPPLAKRVASQVHSLIETASQ-----KAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPID 577
            + +L+HL F+++AA+    C S+LY+ AK N+GPL+  V  +E  V  V+ P+Y+KF  VP            +     + + P L K+ +SQ  ++     +       +++    +     AA +YAA              W  LN   LF  +A + +PTA  WS+KYN  V  +  + Y    YLP++PI+
Sbjct:   38 EMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSVRDKYEPAAEYYAAT------------LWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEYLPMIPIE 221          
The following BLAST results are available for this feature:
BLAST of CK739781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
Y1736_ARATH6.931e-5757.29REF/SRPP-like protein At1g67360 OS=Arabidopsis tha... [more]
SRP_VITRI8.531e-3138.16Stress-related protein OS=Vitis riparia GN=SRP PE=... [more]
Y3550_ARATH8.828e-2837.32REF/SRPP-like protein At3g05500 OS=Arabidopsis tha... [more]
Y5513_ORYSJ1.319e-2335.32REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 ... [more]
Y5513_ORYSI1.319e-2335.32REF/SRPP-like protein OsI_017815 OS=Oryza sativa s... [more]
SRP_PHAVU1.783e-2036.31Stress-related protein OS=Phaseolus vulgaris GN=SR... [more]
SRPP_HEVBR2.329e-2031.77Small rubber particle protein OS=Hevea brasiliensi... [more]
Y2778_ARATH8.849e-2029.08REF/SRPP-like protein At2g47780 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6171 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739781 ID=CK739781; Name=CK739781; organism=Citrus sinensis; type=EST; length=579bp
GAAGAAACAGGAACTGAGGCATCTTGGATTTATGAGGATAGCCGCGATTC
AGGCTCTGGTGTGCGTGTCGAGTTTGTACGACTACGCAAAACGCAACTCG
GGGCCGCTACGCTCACCGGTTGGGACTGTCGAAAGCGCCGTGACTGCCGT
CGTGGGACCTGTTTATCAGAAATTCAAGGGCGTGCCTGATGATCTCCTCG
TTTTTCTTGATAAGAAGGTGGATGAGGCTTCACGCAAGTTTGACGAGCAC
GCTCCCCCTTTGGCCAAGCGGGTTGCCAGCCAAGTACATAGTCTAATTGA
AACAGCATCACAGAAAGCTCAAAATCTTGTGAGTGAGGCCCAAACCGGGG
GGCCTCGAGCAGCTGTCCATTATGCTGCTGCTGAGTCTAAACACCTTCTG
GTAACAAATTCCGTGAAAGCATGGTATAAACTAAACCACTATGCATTGTT
CCACACAATGGCAGATATGGCTGTTCCCACAGCTGCACAGTGGTCCAAGA
AGTATAACCATCTTGTCGTGGAGATGACGAAGAAGGGTTACACAGTCTTT
GGCTATCTTCCTTTGGTTCCCATTGATGA
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