CK739786

Overview
NameCK739786
Unique NameCK739786
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length360
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5160 contig Csv1_Contig5160:17..376. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK739786 vs. ExPASy Swiss-Prot
Match: DHAR1_ARATH (Glutathione S-transferase DHAR1, mitochondrial OS=Arabidopsis thaliana GN=DHAR1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.158e-19
Identity = 41/65 (63.08%), Postives = 54/65 (83.08%), Query Frame = 2 
Query:  164 LEVCVKASSTSPNRLGDCPFCQRVLLTIEEKHLPYDMKLVDLGNKPQWFLKISPEGKVPVIKLDE 358
            LE+CVKA+  +P+ LGDCPF QR LLT+EEK L Y + L++L +KPQWFL ISP+GKVPV+K+D+
Sbjct:    3 LEICVKAAVGAPDHLGDCPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQGKVPVLKIDD 67
The following BLAST results are available for this feature:
BLAST of CK739786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DHAR1_ARATH1.158e-1963.08Glutathione S-transferase DHAR1, mitochondrial OS=... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6176 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739786 ID=CK739786; Name=CK739786; organism=Citrus sinensis; type=EST; length=360bp
GAAGGAAATGTCGACGCTTAGAATTCAACCAAGCACAACAAGTGCAATAT
CGTCAACTATAAAGAACCTGCACCTTGGCTTCTCCTTCCGCCTCCCCTGC
AAAAACTACGGCGTTTCGAAGCGACCTCGGAACCTCTCCGTGATGGCCGT
GGCTACGGATCCTCTTGAAGTCTGCGTCAAAGCTTCGTCCACTTCTCCCA
ACAGACTCGGCGACTGTCCATTTTGCCAAAGGGTGTTGTTGACTATCGAG
GAAAAGCATCTCCCATATGACATGAAGTTGGTAGATTTGGGAAACAAGCC
ACAATGGTTCTTAAAAATTAGCCCTGAAGGTAAAGTTCCTGTTATAAAAC
TGGATGAGAA
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