CK739797

Overview
NameCK739797
Unique NameCK739797
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length296
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10993 contig Csv1_Contig10993:817..1110. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK739797 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.631e-13
Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 2 
Query:    2 AAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGY 118
            AAQD LL RAKANSLAQLGKYTGEGESEEAK+GMFVKGY
Sbjct:  359 AAQDILLARAKANSLAQLGKYTGEGESEEAKEGMFVKGY 397
[Close]
BLAST of CK739797 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.742e-13
Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 2 
Query:    2 AAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGY 118
            AAQ TLL RAKANSLAQLGKYTGEGESEEAK+GMFVKGY
Sbjct:  358 AAQTTLLARAKANSLAQLGKYTGEGESEEAKEGMFVKGY 396
[Close]
BLAST of CK739797 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.888e-11
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 2 
Query:    2 AAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGY 118
            A+Q  LL RAKANSLAQLGKY+ EGE+E+AKKGMFVKGY
Sbjct:  351 ASQKALLVRAKANSLAQLGKYSAEGENEDAKKGMFVKGY 389
The following BLAST results are available for this feature:
BLAST of CK739797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ALFC1_ARATH3.631e-1392.31Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC2_ARATH4.742e-1392.31Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC3_ARATH9.888e-1179.49Probable fructose-bisphosphate aldolase 3, chlorop... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6187 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59G06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739797 ID=CK739797; Name=CK739797; organism=Citrus sinensis; type=EST; length=296bp
GGCAGCTCAGGATACTCTGCTCACCCGTGCCAAGGCCAACTCACTTGCTC
AGCTCGGCAAGTACACTGGCGAGGGAGAATCAGAGGAGGCCAAGAAAGGA
ATGTTCGTCAAGGGCTACCGTCTACTAAATTTGTTAGCACCGAAGATCAT
AATAATGGTGAAGAAATTTGAAATGAGTAGTCATCTCAAATGTGTTAATG
CTTTATAGCCGTGCTTTGGAGACTATTTTTGTTCATGATTACATGTACTT
TTAGCAACTTAATAAACTTCTTGCCAAAAAAAAAAAAAAAAAAAAA
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