CK739799

Overview
NameCK739799
Unique NameCK739799
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1387 contig Csv1_Contig1387:623..1048. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739799 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 5.954e-56
Identity = 101/122 (82.79%), Postives = 109/122 (89.34%), Query Frame = 2
Query:   44 LHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 409
            LHLKVSNIVVIGHSACGGIKGL+SFPFDG  STDFIE+WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL NLLTYPFVREGLVNKTLALKGGYYDFV GSFELWGL+FGLS   SV
Sbjct:  207 LHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV 328          
BLAST of CK739799 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 2.501e-54
Identity = 102/122 (83.61%), Postives = 107/122 (87.70%), Query Frame = 2
Query:   44 LHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 409
            LHLKV NIVVIGHSACGGIKGLMS P DG+ ST FIEDWVKIG+PAK+KV  EH DK F DQCT CEKEAVNVSL NLLTYPFVREGLV KTLALKGG+YDFVNG FELWGL+FGLSP LSV
Sbjct:  200 LHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELWGLEFGLSPSLSV 321          
BLAST of CK739799 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 2.766e-53
Identity = 100/122 (81.97%), Postives = 107/122 (87.70%), Query Frame = 2
Query:   44 LHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 409
            LHLKV NIVVIGHSACGGIKGLMSFP DGNNSTDFIEDWVKI +PAKSKV++E GD  F DQC  CE+EAVNVSL+NLLTYPFVREGLV  TLALKGGYYDFV G+FELWGL+FGLS   SV
Sbjct:  215 LHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEFGLSETSSV 336          
BLAST of CK739799 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 4.717e-53
Identity = 98/122 (80.33%), Postives = 107/122 (87.70%), Query Frame = 2
Query:   44 LHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 409
            LHLKV NIVVIGHSACGGIKGLMSFP  G  +TDFIEDWVKI +PAK KVL EHG+  F +QCT+CEKEAVNVSL NLLTYPFVR+GLV KTLAL+GGYYDFVNGSFELWGL++GLSP  SV
Sbjct:  198 LHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELWGLEYGLSPSQSV 319          
BLAST of CK739799 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 6.812e-52
Identity = 98/122 (80.33%), Postives = 104/122 (85.25%), Query Frame = 2
Query:   44 LHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 409
            LHLKV NIVVIGHSACGGIKGLMSFP DGNNSTDFIEDWVKI +PAKSKVL E     F DQC  CE+EAVNVSL+NLLTYPFVREG+V  TLALKGGYYDFVNGSFELW L FG+SP  S+
Sbjct:  138 LHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWELQFGISPVHSI 259          
BLAST of CK739799 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 3.164e-49
Identity = 92/122 (75.41%), Postives = 101/122 (82.79%), Query Frame = 2
Query:   44 LHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 409
            LHLKV  I VIGHS CGGIKGLM+FP +G +STDFIEDWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL NKTLALKGG+YDFVNG+FELW LDFGLS P SV
Sbjct:  209 LHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELWALDFGLSSPTSV 330          
BLAST of CK739799 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.202e-48
Identity = 91/122 (74.59%), Postives = 100/122 (81.97%), Query Frame = 2
Query:   44 LHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 409
            LHLKV  I VIGHS CGGIKGLM+FP +G +STDFIEDWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL N TLALKGG+YDFVNG+FELW LDFGLS P SV
Sbjct:  208 LHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDFGLSSPTSV 329          
BLAST of CK739799 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.202e-48
Identity = 91/122 (74.59%), Postives = 100/122 (81.97%), Query Frame = 2
Query:   44 LHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 409
            LHLKV  I VIGHS CGGIKGLM+FP +G +STDFIEDWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL N TLALKGG+YDFVNG+FELW LDFGLS P SV
Sbjct:  209 LHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDFGLSSPTSV 330          
BLAST of CK739799 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.202e-48
Identity = 91/122 (74.59%), Postives = 100/122 (81.97%), Query Frame = 2
Query:   44 LHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 409
            LHLKV  I VIGHS CGGIKGLM+FP +G +STDFIEDWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL N TLALKGG+YDFVNG+FELW LDFGLS P SV
Sbjct:  209 LHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDFGLSSPTSV 330          
BLAST of CK739799 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 5.586e-46
Identity = 86/120 (71.67%), Postives = 97/120 (80.83%), Query Frame = 2
Query:   44 LHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPL 403
            LHLKV NIVVIGHS CGGIKGLMS P DG  ++DFIE WVK+G+PAKSKV     +  F D CT CEKEAVNVSL NLLTYPFVR+ LVNK L+LKG +YDFVNG+F+LW LDFG+SP L
Sbjct:   69 LHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLWNLDFGISPSL 188          
The following BLAST results are available for this feature:
BLAST of CK739799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CAHC_PEA5.954e-5682.79Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CAHC_TOBAC2.501e-5483.61Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHC_ARATH2.766e-5381.97Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHC_SPIOL4.717e-5380.33Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAH2_ARATH6.812e-5280.33Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAHX_FLABI3.164e-4975.41Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAHX_FLAPR1.202e-4874.59Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHX_FLABR1.202e-4874.59Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAH1_FLALI1.202e-4874.59Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAH2_FLALI5.586e-4671.67Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6189 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739799 ID=CK739799; Name=CK739799; organism=Citrus sinensis; type=EST; length=426bp
GACTAAGTATGCTGGAGTTGGAGCTGCTGTCGAGTATGCAGTTTTGCATC
TCAAGGTTTCAAACATTGTGGTTATTGGGCACAGCGCCTGTGGCGGCATC
AAAGGACTCATGTCTTTCCCATTTGATGGAAACAACTCCACCGATTTCAT
TGAAGACTGGGTGAAAATTGGCATCCCTGCCAAGTCTAAGGTGTTAACAG
AGCATGGTGACAAGCCTTTTGGAGACCAATGCACATACTGTGAAAAGGAG
GCGGTGAATGTGTCCCTCAGTAATCTGCTAACGTATCCATTTGTGAGAGA
AGGCTTGGTGAACAAAACTCTGGCACTCAAGGGTGGGTACTATGATTTCG
TTAATGGATCATTCGAGCTCTGGGGTCTCGACTTTGGCCTTTCTCCTCCA
CTCTCCGTATGAACATCAACCGTTAT
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