CK739800

Overview
NameCK739800
Unique NameCK739800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1429 contig Csv1_Contig1429:1..566. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 148.288 bits (373), Expect = 2.542e-35
Identity = 75/143 (52.45%), Postives = 104/143 (72.73%), Query Frame = 2
Query:    2 LPCSLEDLYKGTTKKMKISREIADISGKTMQVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRPIK 427
            L  SLE++Y G TKKMKIS +  +  GK+++ E+ ILTI+VK GWK+GTKITFP++G++  N IPAD+VFV+ +KPH++F RDG+D+I   +ISL EAL G TV++ TLDGR++ +   +VI P     VP EG+P  K P K
Sbjct:  168 LRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK 310          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 3.319e-35
Identity = 75/143 (52.45%), Postives = 104/143 (72.73%), Query Frame = 2
Query:    2 LPCSLEDLYKGTTKKMKISREIADISGKTMQVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRPIK 427
            L  SLE++Y G TKKMKIS +  +  GK+++ E+ ILTI+VK GWK+GTKITFP++G++  N IPAD+VFV+ +KPH++F RDG+D+I   +ISL EAL G TV++ TLDGR++ +   +VI P     VP EG+P  K P K
Sbjct:  168 LRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK 310          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 3.319e-35
Identity = 75/143 (52.45%), Postives = 104/143 (72.73%), Query Frame = 2
Query:    2 LPCSLEDLYKGTTKKMKISREIADISGKTMQVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRPIK 427
            L  SLE++Y G TKKMKIS +  +  GK+++ E+ ILTI+VK GWK+GTKITFP++G++  N IPAD+VFV+ +KPH++F RDG+D+I   +ISL EAL G TV++ TLDGR++ +   +VI P     VP EG+P  K P K
Sbjct:  168 LRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK 310          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 5.599e-35
Identity = 72/141 (51.06%), Postives = 102/141 (72.34%), Query Frame = 2
Query:   11 SLEDLYKGTTKKMKISREIADISGKTMQVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRPIKE 430
            SLEDL+ G TKK+KISR + +  G +  +++ ILTIDVKPGW++GT+ITF ++G++ PN+IPAD++F++ EK H  F R+ ++L     I L +ALT  TV + TLD R LNIPIN++IHP Y + VP EGMP  + P K+
Sbjct:  147 SLEDLFFGCTKKIKISRRVLNEDGYSSTIKDKILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDRLLNIPINDIIHPKYFKKVPGEGMPLPEDPTKK 287          

HSP 2 Score: 21.1718 bits (43), Expect = 5.599e-35
Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  405 PLQKDPSKRGNL 440
            PL +DP+K+G+L
Sbjct:  279 PLPEDPTKKGDL 290          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.793e-34
Identity = 70/141 (49.65%), Postives = 102/141 (72.34%), Query Frame = 2
Query:   11 SLEDLYKGTTKKMKISREIADISGKTMQVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRPIKE 430
            SLEDL+ G TKK+KISR + +    +  +++ ILTIDV+PGW++GT+ITF ++G++ PN+IPAD++F++ EK H  F R+ ++L     I L +ALT  TV + TLD R LNIPIN+++HP Y +IVP EGMP  + P K+
Sbjct:  147 SLEDLFFGCTKKIKISRRVLNEDRYSSTIKDKILTIDVRPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLDDRLLNIPINDIVHPKYFKIVPGEGMPLPENPSKK 287          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.058e-33
Identity = 68/141 (48.23%), Postives = 101/141 (71.63%), Query Frame = 2
Query:    2 LPCSLEDLYKGTTKKMKISREIADISGKTMQVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRP 421
            L  SLE++Y G TK+MKISR+  +  G++ + E+ ILTI++K GWK+GTKITFP +G+E PN IPAD+VF+I +K H  F RDG+++I T KISL EAL G ++++ TLDGR++ + +N+++ P     +   G+P  K P
Sbjct:  164 LRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPKNP 304          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.058e-33
Identity = 68/141 (48.23%), Postives = 101/141 (71.63%), Query Frame = 2
Query:    2 LPCSLEDLYKGTTKKMKISREIADISGKTMQVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRP 421
            L  SLE++Y G TK+MKISR+  +  G++ + E+ ILTI++K GWK+GTKITFP +G+E PN IPAD+VF+I +K H  F RDG+++I T KISL EAL G ++++ TLDGR++ + +N+++ P     +   G+P  K P
Sbjct:  164 LRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPKNP 304          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.014e-32
Identity = 68/141 (48.23%), Postives = 100/141 (70.92%), Query Frame = 2
Query:    2 LPCSLEDLYKGTTKKMKISREIADISGKTMQVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRP 421
            L  SLE++Y G TK+MKISR+  +  G++ + E+ ILTI++K GWK+GTKITFP +G+E P  IPAD+VFVI +K H  F RDG+++I T KISL EAL G ++++ T+DGR++ + IN+++ P     +   G+P  K P
Sbjct:  164 LRVSLEEIYSGCTKRMKISRKRLNPDGRSYRTEDKILTIEIKKGWKEGTKITFPREGDETPTSIPADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGRTIPMTINDIVKPGMRRRIIGYGLPFPKNP 304          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.435e-32
Identity = 68/141 (48.23%), Postives = 100/141 (70.92%), Query Frame = 2
Query:    2 LPCSLEDLYKGTTKKMKISREIADISGKTMQVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRP 421
            L  SLE++Y G TK+MKISR+  +  G++ + E+ ILTI++K GWK+GTKITFP +G+E PN IPAD+VFVI +K H  F RDG++++ T KISL EAL G ++++ T+DGR+L + + +++ P     V   G+P  K P
Sbjct:  164 LKVSLEEIYSGCTKRMKISRKRLNPDGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVTDIVKPGMRRRVIGYGLPFPKNP 304          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: PSI1_SCHPO (Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.227e-31
Identity = 74/160 (46.25%), Postives = 100/160 (62.50%), Query Frame = 2
Query:    2 LPCSLEDLYKGTTKKMKISREIADISGKTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRPIKEREP*ESNSTSRVPTKLT 481
            L  SLEDL+ G TKKMKISR I D SG++++ + IL I VKPGWK GTKI F  +G+E+P+    D+ FV+ EKPH VFTR G+DL +  ++SL EAL G +  ++T+DG+ L +  +    P YE   P  GMP  K P  +R         + PT+LT
Sbjct:  211 LNVSLEDLFTGCTKKMKISRHIIDASGQSVKADRILEIKVKPGWKAGTKIKFAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDDLRMQVELSLKEALLGFSKQISTIDGKKLKVSSSLPTQPGYEITYPGFGMPLPKNP-SQRGNMIIECKVKFPTELT 369          
The following BLAST results are available for this feature:
BLAST of CK739800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DNJB1_HUMAN2.542e-3552.45DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNJB1_MOUSE3.319e-3552.45DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]
DNJB1_BOVIN3.319e-3552.45DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
DJB13_HUMAN5.599e-3551.06DnaJ homolog subfamily B member 13 OS=Homo sapiens... [more]
DJB13_MOUSE4.793e-3449.65DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]
DNJB4_PONAB4.058e-3348.23DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN4.058e-3348.23DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJB4_BOVIN2.014e-3248.23DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNJB4_MOUSE3.435e-3248.23DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
PSI1_SCHPO2.227e-3146.25Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6190 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739800 ID=CK739800; Name=CK739800; organism=Citrus sinensis; type=EST; length=572bp
GTTGCCTTGTAGCCTTGAGGATCTCTATAAGGGGACCACTAAGAAGATGA
AGATCTCTAGAGAGATAGCTGATATAAGTGGCAAGACTATGCAGGTAGAG
GAAATTCTAACTATTGATGTGAAGCCCGGATGGAAGAAGGGTACAAAGAT
CACCTTCCCTGAGAAAGGAAATGAGCAGCCAAATGTTATACCTGCTGATC
TTGTATTCGTTATTGATGAGAAGCCTCACAGTGTATTTACTCGGGATGGA
AATGATTTGATTGTCACACAGAAGATATCTCTTGCAGAAGCATTGACAGG
TCATACAGTTCATCTCACCACCCTAGATGGGAGAAGTTTAAACATCCCAA
TCAACAATGTGATTCATCCCACCTACGAGGAAATTGTCCCAAGAGAAGGA
ATGCCCCCTTCAAAAAGACCCATCAAAGAGAGGGAACCTTGAGAATCAAA
TTCAACATCCAGGGTCCCTACTAAGTTGACCGCCCAGCCACAAGGGGGGA
ATCAAGAAACTCCTTTGGTCCCTGAAATAGATACACCCGGCAAATGATAT
TTTTCAGAAACAGAGCTTTTTG
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