CK739819

Overview
NameCK739819
Unique NameCK739819
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length477
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK739819_ssr446 microsatellite CK739819_ssr446:446..455. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12329 contig Csv1_Contig12329:389..863. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739819 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 9.315e-31
Identity = 56/67 (83.58%), Postives = 66/67 (98.51%), Query Frame = 2
Query:  113 EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 313
            ++++VNRCSGCR+KVGLTGFRCRCGELFC EHRYSDRHDCSYDYK+AGR+AIARENPV+KAAK+V+V
Sbjct:   94 DQQIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVKAAKMVKV 160          
BLAST of CK739819 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 7.380e-28
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 2
Query:  125 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 310
            VNRC  CRR+VGLTGFRCRCGEL+CG HRYSDRHDCS+DYKSA RDAIARENPV++AAKIVR
Sbjct:  108 VNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKIVR 169          
BLAST of CK739819 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.259e-27
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 2
Query:  125 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 310
            VNRCS CR++VGLTGFRCRCG LFCGEHRYSDRH CSYDYKSA RDAIAR+NPV++AAKIVR
Sbjct:  102 VNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 163          
BLAST of CK739819 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.259e-27
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 2
Query:  125 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 310
            VNRCS CR++VGLTGFRCRCG LFCGEHRYSDRH CSYDYKSA RDAIAR+NPV++AAKIVR
Sbjct:  102 VNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 163          
BLAST of CK739819 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.457e-23
Identity = 44/63 (69.84%), Postives = 57/63 (90.48%), Query Frame = 2
Query:  125 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 313
            VNRC+ CR++VGLTGFRCRCGELFC  HR+S+ H+CS+DYK+AGR+ IAR NPVI+AAKI+++
Sbjct:  112 VNRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKIIKI 174          
BLAST of CK739819 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.348e-21
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 2
Query:  128 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 313
            NRCS CR++VGLTGF CRCG L+C  HRYSD+HDC +DY++A RDAIA+ NPV+KA K+ ++
Sbjct:  110 NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of CK739819 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.348e-21
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 2
Query:  128 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 313
            NRCS CR++VGLTGF CRCG L+C  HRYSD+HDC +DY++A RDAIA+ NPV+KA K+ ++
Sbjct:  110 NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of CK739819 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 6.691e-21
Identity = 39/62 (62.90%), Postives = 53/62 (85.48%), Query Frame = 2
Query:  128 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 313
            NRC+ CR++VGLTGF+CRCG +FCG HRY + H CSYD+KSAGR+ IA+ NP++KAAK+ ++
Sbjct:  109 NRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170          
BLAST of CK739819 vs. ExPASy Swiss-Prot
Match: SAP2_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Oryza sativa subsp. japonica GN=SAP2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 6.691e-21
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  128 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 313
            +RC+ C R VGL GF CRCG +FCG HRYSDRHDC YDY+ AGRDAIAR NPV++  K+ ++
Sbjct:   87 SRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVEKL 148          
BLAST of CK739819 vs. ExPASy Swiss-Prot
Match: SAP14_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 14 OS=Oryza sativa subsp. japonica GN=SAP14 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.491e-20
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 2
Query:  104 ANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKI 304
            A  E+   NRC+ CRRKVGLTGF+CRCG  FCG HRY+D H C +DYKS+GR+ IA++NPV+ A K+
Sbjct:  167 ATGEQPEANRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKL 233          
The following BLAST results are available for this feature:
BLAST of CK739819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP5_ARATH9.315e-3183.58Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP11_ORYSJ7.380e-2885.48Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSJ1.259e-2785.48Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSI1.259e-2785.48Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP15_ORYSJ2.457e-2369.84Zinc finger AN1 domain-containing stress-associate... [more]
SAP8_ORYSJ1.348e-2164.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI1.348e-2164.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH6.691e-2162.90Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ORYSJ6.691e-2164.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP14_ORYSJ1.491e-2061.19Zinc finger AN1 domain-containing stress-associate... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6209 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE60B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739819 ID=CK739819; Name=CK739819; organism=Citrus sinensis; type=EST; length=477bp
GAGAAATCTTTGAGATCTCGGCCTATCATCCGGTCTGGGTCATCCGATGC
TGCCGGTACGACCGGTCAAAATCAGGAGTTGACGGATCGGCATGAGAAGA
TAAGCCAACGTAGAGAAACGAGTTGTGAATCGGTGCTCCGGTTGTCGACG
AAAGGTTGGATTGACCGGATTTAGATGTCGCTGCGGGGAGCTGTTCTGCG
GCGAACATCGGTACTCCGATCGTCACGATTGCAGCTATGATTATAAATCG
GCCGGTCGCGACGCCATCGCGAGAGAAAATCCGGTGATCAAAGCTGCCAA
GATCGTTAGAGTTTGAAAGCTTAATTTGAAAACACGATTATAAAGGTCAA
AAATTCAGATCAATTTATACACATCATGAAACGATGTCATTTCGCCAGAT
CTCTTCCTCAGGAATATGGTGATCAAAGGATCGAAAGAGGGTTTTAGAGA
GAGAGTTGATCAGATTTATGAATTGTT
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