CK739837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739837 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.177e-20 Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 3 LCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILN 359 L L+ G PL+PE+ SP+ F ++F L E + +G ++ W N QR+WM+K +TS+ YG +D I KLLGL K SF T KV D ++ KRYE +F +SS V + ++ +LN Sbjct: 540 LGLVKGTPLFPEIMSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWMVKRITSYLYGFIDTIRKLLGLSKMSFEITAKVSDGDEAKRYEQEILEFGSSSPEFVIIATVALLN 658
BLAST of CK739837 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.967e-19 Identity = 42/120 (35.00%), Postives = 75/120 (62.50%), Query Frame = 3 Query: 3 LCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNV 362 LC LNGI L+PE +SP+F+ F+++ ++A L E + G S W N QR+W+I+ +TS+ ++D ++LG+ ++ F T KV D + ++RY+ G +F + S V + ++ +LN+ Sbjct: 552 LCFLNGISLFPEKTSPWFIPFAYVMVAAYSCSLAESLQCGDSAVEWWNAQRMWLIRRITSYLLATIDTFRRILGISESGFNLTVKVTDLQALERYKKGMMEFGSFSAMFVILTTVALLNL 671
BLAST of CK739837 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.383e-19 Identity = 45/120 (37.50%), Postives = 74/120 (61.67%), Query Frame = 3 Query: 3 LCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNV 362 LCL GIPL+P+VSS +F+ F ++ ++A L E + GG+ W NEQR+W+ + +S +G MD I KLLG+ +++F+ T KV + E +RY+ +F S + + +L +LN+ Sbjct: 537 LCLFKGIPLFPKVSSSWFIPFGYVTVAATAYSLAEFLWCGGTFRGWWNEQRMWLYRRTSSFLFGFMDTIKKLLGVSESAFVITAKVAEEEAAERYKEEVMEFGVESPMFLVLGTLGMLNL 656
BLAST of CK739837 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.666e-18 Identity = 45/121 (37.19%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 3 LCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVL-DNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNV 362 L L++G+ ++P+ S P+F ++ +F A + L + + GG+ W N+QR+ MIK ++S F+G ++ I+K L L F T+K D+EQ KRYE FDF TSS +P+ ++ I+N+ Sbjct: 541 LALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDFLLEGGTYRKWWNDQRMLMIKGLSSFFFGFIEFILKTLNLSTPKFNVTSKANDDDEQRKRYEQEIFDFGTSSSMFLPLTTVAIVNL 661
BLAST of CK739837 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.841e-18 Identity = 45/119 (37.82%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 3 LCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILN 359 L L+ G PL+P++ SP+ F ++F L E + +G ++ W N QR+WM+KS+TS+ YG +D I K +G+ K SF T KV +++ KRYE +F +SS V + ++ +LN Sbjct: 545 LGLVKGTPLFPQIMSPWATPFIYVFCVKTLYGLYEALLSGDTLKGWWNGQRMWMVKSITSYLYGFIDTIRKCVGMSKMSFEVTAKVSGHDEAKRYEQEILEFGSSSPEYVIIATVALLN 663
BLAST of CK739837 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.710e-18 Identity = 41/121 (33.88%), Postives = 74/121 (61.16%), Query Frame = 3 Query: 3 LCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVL-DNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNV 362 + L++G+ ++P+ S P+F ++ +FL + L + + GG+ W N+QR+WM++ ++S F+G + +K L L + T+K DNEQ+KRYE FDF SS +P+ ++ I+N+ Sbjct: 531 VALIHGVSVFPKASDPWFWLYIILFLGGYAQDLSDFLLEGGTYRKWWNDQRMWMVRGLSSFFFGFTEFTLKTLNLSTQGYNVTSKSNDDNEQMKRYEQEIFDFGPSSSMFLPITTVAIMNL 651
BLAST of CK739837 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15 Identity = 42/121 (34.71%), Postives = 70/121 (57.85%), Query Frame = 3 Query: 3 LCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDN-EQVKRYEMGQFDFQTSSVFLVPMVSLMILNV 362 L LL ++P+ S P+F ++ +FL A + L + + GG+ W N+QR+W I+ +SH +G ++ +K L L F T+K D+ EQ KRYE F+F SS +P+ ++ I+N+ Sbjct: 560 LALLYQSSVFPKSSDPWFWLYIVLFLGAYGQDLLDFVLEGGTYGGWWNDQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRYEKEIFEFGPSSSMFLPLTTVAIVNL 680 The following BLAST results are available for this feature:
BLAST of CK739837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739837 ID=CK739837; Name=CK739837; organism=Citrus sinensis; type=EST; length=364bpback to top |