CK739850

Overview
NameCK739850
Unique NameCK739850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1430 contig Csv1_Contig1430:1..639. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.395e-29
Identity = 64/166 (38.55%), Postives = 99/166 (59.64%), Query Frame = 1
Query:  139 KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            +L HPN+ +FI A       K P                 C++ EY+  G L+ +L + +   L+ + V+++ALD++RG+ YLHS+ ++HRD+K+ N+LL+    +K+ADFG + +E Q  R+  G  GT  +MAPE++  KPY RK DVYSFGI LWE+    +P
Sbjct:  141 RLFHPNIVQFIAACK-----KPP---------------VYCIITEYMSQGNLRMYLNKKEPYSLSIETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQ-CREAKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLP 285          

HSP 2 Score: 24.2534 bits (51), Expect = 3.395e-29
Identity = 15/45 (33.33%), Postives = 24/45 (53.33%), Query Frame = 3
Query:    6 VYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVACLAK 140
            +YRG Y  + VAVK++        T A+   +   F+ EVA L++
Sbjct:  100 IYRGIYKQRAVAVKMVRIPTHKEETRAK---LEQQFKSEVALLSR 141          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: CTR1_ARATH (Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 9.160e-26
Identity = 64/180 (35.56%), Postives = 100/180 (55.56%), Query Frame = 1
Query:  106 HHFGKRWPVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN-KRKKLAFKGVIQIALDLARGLSYLHSKK--IVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            + F +   + ++L HPN+  F+GA     NL I                    V EYL  G+L + L ++  R++L  +  + +A D+A+G++YLH++   IVHRD+K+ N+L+D   T+K+ DFG++R++A          GT  +MAPEVL  +P N K DVYSFG+ LWE+     P
Sbjct:  591 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI--------------------VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 750          

HSP 2 Score: 25.0238 bits (53), Expect = 9.160e-26
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 3
Query:    3 TVYRGAYDGQDVAVKIL 53
            TV+R  + G DVAVKIL
Sbjct:  564 TVHRAEWHGSDVAVKIL 580          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 9.794e-25
Identity = 59/175 (33.71%), Postives = 101/175 (57.71%), Query Frame = 1
Query:  112 FGKRWPVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            F K   +  +L HPN+   + A     NL                    C + EYLPGG+L   L  +K+ K+  +   ++A+ +A+G++YLH   ++HRD+K+ N+LLD +  +KI DFG++++++++  +MT   G+  +M+PE+L G+ Y  K DVY+FGI LWE+   ++P
Sbjct:  705 FRKELTILSRLRHPNIVLLMAACTAPPNL--------------------CFITEYLPGGSLYDAL-HSKKIKMNMQLYKKLAIQIAQGMNYLHLSGVIHRDIKSLNLLLDEHMNVKICDFGLSKLKSKS-TEMTKSIGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTGELP 857          

HSP 2 Score: 21.557 bits (44), Expect = 9.794e-25
Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 3
Query:    6 VYRGAYDGQDVAVKILDWAED 68
            VY+G + G  VA+K +   ED
Sbjct:  676 VYKGLWRGSSVAIKQIKINED 696          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: YR826_MIMIV (Putative serine/threonine-protein kinase/receptor R826 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R826 PE=4 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 2.139e-24
Identity = 62/169 (36.69%), Postives = 94/169 (55.62%), Query Frame = 1
Query:  136 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHS--KKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            +KL HPN+   +GAS+   N+                    C+V EY+  G L+  + R    KL +   I+I +++A+G+SYLHS    I+HRD+K  N+L+D N  +KIADFG AR++ +N   +    GT  + APE++    Y+ K DV+SFGI +WE+  C  P
Sbjct: 1449 KKLHHPNIITMVGASLKKPNI--------------------CIVTEYMAKGNLRDAM-RTCTPKLEWHQKIKILVNIAKGISYLHSFDPPIIHRDIKPSNILIDENWNVKIADFGFARIKEENA--IMTRCGTPCWTAPEIIRNDIYDEKVDVFSFGIVMWEVLTCKEP 1594          

HSP 2 Score: 20.7866 bits (42), Expect = 2.139e-24
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 3
Query:    6 VYRGAYDGQDVAVK 47
            VYRG +   DVA+K
Sbjct: 1413 VYRGKWKNVDVAIK 1426          

HSP 3 Score: 85.1149 bits (209), Expect = 3.308e-16
Identity = 56/175 (32.00%), Postives = 86/175 (49.14%), Query Frame = 1
Query:  130 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVAR----VEAQNPRDMTGETGTLGYMAPEVL--DGKPYNRKCDVYSFGICLWEIYCCDMP 636
            V   L HPNV  F+ AS     +                    C+V+E++  G+L   L       + F   ++IA   ++G+ +LHS  I HRD+K+ N+LLD    +K++DFG+ +    V++ NP       GT+ + APE+L  D +      DVYSFGI +WE+   D P
Sbjct:  835 VMTTLRHPNVVLFMAASTKPPKM--------------------CIVMEFMALGSLHDLLKNELIPDIPFALKVKIAYQASKGMHFLHSSGITHRDLKSLNLLLDIKWNVKVSDFGLTKFKSDVKSINPEKF---AGTIQWTAPEILSEDREVDYILSDVYSFGIIMWELITRDQP 986          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: LIMKA_DICDI (Probable LIM domain-containing serine/threonine-protein kinase DDB_G0287001 OS=Dictyostelium discoideum GN=DDB_G0287001 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.126e-22
Identity = 58/158 (36.71%), Postives = 84/158 (53.16%), Query Frame = 1
Query:  145 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 618
            DHPN T+F GA                   N    +    V E +  G+L+  L+ +K K LA+   + IA D+A  + +LHS  ++HRD+K+ N+L+  + T K+ DFG +R      + MT   GT  YM+PE+  G  Y+  CDVY+FGI LWEI
Sbjct:  440 DHPNFTRFYGA-------------------NKQNKKYLFHVSELVKSGSLRDLLL-DKEKPLAYFTQLSIASDIANAMKHLHSIGVIHRDLKSLNVLITEDFTAKVIDFGTSR-NVDLAKQMTLNLGTSCYMSPELFKGNGYDETCDVYAFGIVLWEI 576          

HSP 2 Score: 26.1794 bits (56), Expect = 1.126e-22
Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 3
Query:    6 VYRGAYDGQDVAVKI 50
            VY+G Y G+DVA+K+
Sbjct:  400 VYKGIYKGRDVAIKV 414          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: YTYK2_DICDI (Probable tyrosine-protein kinase DDB_G0283397 OS=Dictyostelium discoideum GN=DDB_G0283397 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.387e-22
Identity = 65/180 (36.11%), Postives = 94/180 (52.22%), Query Frame = 1
Query:  112 FGKRWPVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSK----KIVHRDVKTENMLLDANRTL-KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            F K   +  KL HP    FIGA     +L  PS   +             +++EY+ GG+L++ L       L     + IA D+A G++YLH+      IVHRD+ + N+LL+++ T+ KI DFG+++     P +MT   G+L +MAPE    + Y  K DVYSF I LWEI  C  P
Sbjct:  220 FDKEVSIMSKLCHPTCVMFIGAC----SLDGPSNDRS-------------IIMEYMEGGSLRRLLDEKSSYHLPPSLQLSIARDIAEGMNYLHTNFKEGPIVHRDLTSSNILLNSSYTVAKINDFGLSKEMKPGPTEMTAAMGSLAWMAPECFKAENYTEKVDVYSFAIILWEIVTCRDP 382          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: SHKD_DICDI (Dual specificity protein kinase shkD OS=Dictyostelium discoideum GN=shkD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.902e-22
Identity = 64/187 (34.22%), Postives = 96/187 (51.34%), Query Frame = 1
Query:   82 LLKLLQFGHHFGKRWPVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK-LAFKGVIQIALDLARGLSYLHS-KKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            L +L  F H       +  K+ HPNV  F+GA   +  ++I ++   +D                     L+K L  ++ KK  +    +Q+A D A G+++LH   +IVH D+KT N+L+D N  +K+ DFG ++++           GT  +MAPEV+ G PYN K DVYSFGI LWEI   + P
Sbjct:  313 LYELTSFRHEV----KIMSKIFHPNVVLFLGACTQSGKMQIVTELCQTD---------------------LEKLLHNDRTKKEFSLFRRMQMAKDAALGMNWLHGITRIVHNDLKTANLLVDINLRVKVTDFGFSQIKEGEEFQDKAAKGTPLWMAPEVMMGNPYNEKADVYSFGIILWEILTKEAP 474          

HSP 2 Score: 23.483 bits (49), Expect = 1.902e-22
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 3
Query:    3 TVYRGAYDGQDVAVKI 50
            +VY+G   GQ+VAVKI
Sbjct:  290 SVYKGKCRGQEVAVKI 305          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: GEFX_DICDI (RasGEF domain-containing serine/threonine-protein kinase X OS=Dictyostelium discoideum GN=gefX PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.464e-22
Identity = 57/163 (34.97%), Postives = 92/163 (56.44%), Query Frame = 1
Query:  136 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQ--NPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 618
            Q L HP +  F G  + ++ L I                    V E++ GG +++ L   K   + +   + IA+DLA+ + +LH+KKI+HRD+K++N+LLD  + +++ DFG AR+  Q    R MT   GT G++APE+L G  Y+  CDV+S+G+ L E+
Sbjct:   70 QSLRHPFIVNFSGICVHSSGLYI--------------------VTEFVSGGDVRQLL--KKTPPIGWDKRVSIAVDLAKAMVFLHAKKIIHRDLKSKNILLDEFQRIRLCDFGFARMSEQTKKSRHMT-MCGTEGWVAPEILLGMSYDTSCDVFSYGVVLAEL 209          

HSP 2 Score: 26.9498 bits (58), Expect = 2.464e-22
Identity = 11/22 (50.00%), Postives = 17/22 (77.27%), Query Frame = 3
Query:    3 TVYRGAYDGQDVAVKILDWAED 68
            +V+RG Y G DVA+K ++ A+D
Sbjct:   34 SVFRGCYLGLDVAIKKIEKADD 55          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: Y1197_DICDI (Probable serine/threonine-protein kinase DDB_G0288147 OS=Dictyostelium discoideum GN=DDB_G0288147 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.188e-22
Identity = 60/179 (33.52%), Postives = 91/179 (50.84%), Query Frame = 1
Query:  112 FGKRWPVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR---KKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            F K   +     HP V K  GA    TN                      +V E    GT+   L + ++   +  A   ++ +A+D A+ L ++HSK I+HRDVK  N L++ N  +K+ DFGV+R VEA+    +    GT  YMA E+ +G+PY++  DV+SFG+ LWE++  D P
Sbjct:  640 FYKEITIVSASQHPKVIKCYGAHTKNTNKPF-------------------IVTELCSRGTISNALNQIRKTTGQPPAIPLIVHMAIDAAQSLEFIHSKNIIHRDVKGNNFLVNENWEVKLIDFGVSRFVEARLGYTI---VGTPNYMACELFNGQPYHQPADVFSFGVVLWEMFTQDTP 796          

HSP 2 Score: 30.4166 bits (67), Expect = 3.188e-22
Identity = 13/24 (54.17%), Postives = 19/24 (79.17%), Query Frame = 3
Query:    3 TVYRGAYDGQDVAVKILDWAEDGM 74
            TVY G Y+G DVA+K  ++++DGM
Sbjct:  612 TVYSGVYNGMDVAIK--EFSQDGM 633          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.151e-22
Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = 1
Query:  139 KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKK--IVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 618
            KL HPN+  F+GA                 +  S P    C+V EYL  G+L   L+ ++  ++ +   +Q+  D ARG++YLHS+   I+HRD+KT+N+L+D +  +K+ADFG+A V++          GT G++APEVL  + Y  K DVYS+ I LWE+
Sbjct:  902 KLRHPNIVLFMGAC----------------TEPSSP----CIVTEYLSRGSLANILL-DESIEMDWGLRLQLGFDCARGMTYLHSRNPIIIHRDLKTDNLLVDDSWQVKVADFGLATVKSHTFAKTM--CGTTGWVAPEVLAEEGYTEKADVYSYAIVLWEL 1040          

HSP 2 Score: 23.0978 bits (48), Expect = 4.151e-22
Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 3
Query:    6 VYRGAYDGQDVAVKIL 53
            V+RG++ G +VAVK+L
Sbjct:  865 VFRGSWRGTEVAVKML 880          
The following BLAST results are available for this feature:
BLAST of CK739850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HT1_ARATH3.395e-2938.55Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
CTR1_ARATH9.160e-2635.56Serine/threonine-protein kinase CTR1 OS=Arabidopsi... [more]
Y9955_DICDI9.794e-2533.71Probable serine/threonine-protein kinase DDB_G0267... [more]
YR826_MIMIV2.139e-2436.69Putative serine/threonine-protein kinase/receptor ... [more]
LIMKA_DICDI1.126e-2236.71Probable LIM domain-containing serine/threonine-pr... [more]
YTYK2_DICDI1.387e-2236.11Probable tyrosine-protein kinase DDB_G0283397 OS=D... [more]
SHKD_DICDI1.902e-2234.22Dual specificity protein kinase shkD OS=Dictyostel... [more]
GEFX_DICDI2.464e-2234.97RasGEF domain-containing serine/threonine-protein ... [more]
Y1197_DICDI3.188e-2233.52Probable serine/threonine-protein kinase DDB_G0288... [more]
DRKD_DICDI4.151e-2237.65Probable serine/threonine-protein kinase drkD OS=D... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6240 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739850 ID=CK739850; Name=CK739850; organism=Citrus sinensis; type=EST; length=639bp
GGACTGTGTACCGCGGCGCATATGATGGCCAAGATGTTGCAGTGAAGATA
TTGGATTGGGCGGAGGATGGGATGGTCACATCTGCTGAAGCTGCTGCAAT
TCGGGCATCATTTCGGCAAGAGGTGGCCTGTTTGGCAAAAGCTTGACCAT
CCAAACGTAACCAAATTTATTGGAGCTTCAATGGGAACAACCAATCTTAA
GATTCCTTCCCAAAGTGCTACGAGTGACAGCCATAATTCTCTTCCTTCCA
GGGCTTGCTGTGTTGTTGTTGAATACCTTCCAGGCGGGACATTGAAGAAA
TTTTTGATCAGGAACAAGAGGAAAAAACTTGCCTTTAAGGGTGTGATTCA
AATTGCTTTGGATCTTGCTAGAGGATTGAGCTATCTTCACTCAAAAAAGA
TTGTACATCGTGATGTTAAGACAGAAAACATGTTGCTAGATGCTAACAGA
ACTTTGAAAATTGCTGATTTTGGTGTTGCTCGAGTTGAAGCTCAGAATCC
AAGGGACATGACTGGGGAAACAGGAACTCTTGGGTACATGGCCCCAGAGG
TACTGGATGGGAAGCCTTACAATAGGAAATGCGATGTCTATAGCTTTGGG
ATATGCCTATGGGAAATCTACTGCTGCGATATGCCTTTA
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