CK739889

Overview
NameCK739889
Unique NameCK739889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.135e-26
Identity = 65/176 (36.93%), Postives = 99/176 (56.25%), Query Frame = 2
Query:   11 PINNVRYGSSFVPHVERALEWKDFLSLFYVSEEETSAFWPPVCKDEMLEYMRSSEVLIKRLMDVLVKGL-----NVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            P + + Y S+F      A  W+D L  +   +       P  C + M+EY +    L K L ++L + L     ++K +D     +LLG      +YYP CP P+LT+G+ +HSD S  TILLQD IGGL V  D    W+ V P+ G+L++N+GD LQ+++N ++ S+EH V+AN
Sbjct:  132 PASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLG------HYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQ--YWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLAN 299          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.010e-24
Identity = 53/158 (33.54%), Postives = 97/158 (61.39%), Query Frame = 2
Query:   68 EWKDFLSLF-YVSEEETSAFWPPVCKDEMLEYMRSSEVLIK---RLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGS 529
            +W++ ++ F Y +     + WP   +  +    + SE L++   +L+DVL + + +++ + + +  +   ++V +N+YP CP P+LT+G+ RH+D  T T+LLQD +GGL   KDNG  WI V P+ G+ ++N+GD    +SNGR+K+ +H  + N +
Sbjct:  129 DWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEK-EALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN 285          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.319e-24
Identity = 58/154 (37.66%), Postives = 91/154 (59.09%), Query Frame = 2
Query:   62 ALEWKDFLSLFYVSEEETSAFWPPVCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            A  W+D +  +      +   +P  C + ++++ +  + L   L+++L +GL + R   +++ M       + NYYP CP PELT+G  +H+DI   TILLQDD+GGL V   N   W+ V P  GSL++NIGD LQ++SN +Y S+EH  I+N
Sbjct:  147 AASWRDTIFCYMAPNPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDR-SYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQN--HWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISN 297          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 2.939e-24
Identity = 65/173 (37.57%), Postives = 95/173 (54.91%), Query Frame = 2
Query:   20 NVRYGSSFVPHVERALEWKDFLSLFYVSEEETSAFWPPVCKDEMLEYMRSSEVLIKRLMDVLVKGLNVK-----RIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            N  Y S++V     A  W+D +     S +     +P VC+D +++Y      L   L ++L + L +K      +D     +LLG      +YYP CP PELT G  +HSD    TIL+QD IGGL +  +N   WI V  I G+L+INI D LQ+++N ++KS+EH V+AN
Sbjct:  165 NFLYSSNYVLIPGIACNWRDTMECIMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLG------HYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLEN--QWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLAN 329          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.838e-24
Identity = 55/160 (34.38%), Postives = 94/160 (58.75%), Query Frame = 2
Query:   62 ALEWKDFLSLF-YVSEEETSAFWPPV---CKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGS 529
            A++W++F++ F Y       + WP      +     Y     VL  +L++VL + + +++ D + +  +   ++V +NYYP CP P+LT+GV RH+D  T TILLQD +GGL   +D G  WI V P+ G+ ++N+GD    +SNGR+++ +H  + N +
Sbjct:  125 AMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGD-LTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQDMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNST 283          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.458e-23
Identity = 52/162 (32.10%), Postives = 93/162 (57.41%), Query Frame = 2
Query:   56 ERALEWKDFLSLF-YVSEEETSAFWPPVCKDEML---EYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGS 529
            E   +W++ ++ F Y       + WP   +  +    EY      L  +L++VL + + +++ + +    +   +++ +NYYP CP P+LT+G+ RH+D  T T+LLQD +GGL   +DNG  WI V P+ G+ ++N+GD    +SNGR+K+ +H  + N +
Sbjct:  122 EAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEK-ESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN 282          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.905e-23
Identity = 53/162 (32.72%), Postives = 95/162 (58.64%), Query Frame = 2
Query:   56 ERALEWKDFLSLF-YVSEEETSAFWPPVCKDEMLEYMRSSEVLIK---RLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGS 529
            E   +W++ ++ F Y  +    + WP    +        S+VL+    +L++VL + + +++ + + +  +   ++V +NYYP CP P+LT+G+ RH+D  T T+LLQD +GGL   +D G  WI V P+ G+ ++N+GD    +SNGR+K+ +H  + N S
Sbjct:  120 EAVQDWREIVTYFSYPIKARDYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGLEK-EALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSS 280          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.243e-23
Identity = 57/161 (35.40%), Postives = 92/161 (57.14%), Query Frame = 2
Query:   56 ERALEWKDFLSLF-YVSEEETSAFWPPVCKDEMLEYMRSSEVLIK---RLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANG 526
            E   +W++ ++ F Y  +      WP           R SE L+     LM VL + + ++  + + +  +   ++V +N+YP CP P+LT+G+ RH+D  T T+LLQD +GGL   +D G +WI V PISG+ ++N+GD    MSNGR+K+ +H  + NG
Sbjct:  125 EAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLET-EALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNG 284          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.238e-23
Identity = 52/162 (32.10%), Postives = 91/162 (56.17%), Query Frame = 2
Query:   56 ERALEWKDFLSLF-YVSEEETSAFWPPV---CKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGS 529
            E   +W++ ++ F Y       + WP      +    EY      L  +L++VL + +++ + D +    +   ++V +N+YP CP P+LT+G+ RH+D  T T+LLQD +GGL   +D G  WI V P+ G+ ++N+GD    +SNGR+K+ +H  + N +
Sbjct:  123 EAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDK-DALTNACVDMDQKVVVNFYPQCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSN 283          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.238e-23
Identity = 51/162 (31.48%), Postives = 92/162 (56.79%), Query Frame = 2
Query:   56 ERALEWKDFLSLF-YVSEEETSAFWPPVCKDEML---EYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGS 529
            E   +W++ ++ F Y       + WP   +       EY      L  +L++VL + + +++ + +    +   +++ +NYYP CP P+LT+G+ RH+D  T T+LLQD +GGL   +D+G  WI V P+ G+ ++N+GD    +SNGR+K+ +H  + N +
Sbjct:  121 EAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEK-ESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN 281          
The following BLAST results are available for this feature:
BLAST of CK739889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
ACCH1_ARATH9.135e-2636.931-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FL3H_PETHY1.010e-2433.54Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
ACCH3_SOLLC1.319e-2437.661-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
DV4H_CATRO2.939e-2437.57Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
FNSI_PETCR3.838e-2434.38Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FL3H_ARATH1.458e-2332.10Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FL3H_CALCH1.905e-2332.72Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_HORVU4.243e-2335.40Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
FL3H_VITVI7.238e-2332.10Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FL3H_MATIN7.238e-2331.48Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6281 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739889 ID=CK739889; Name=CK739889; organism=Citrus sinensis; type=EST; length=533bp
GGAGAATTCACCAATAAATAATGTCAGGTACGGCTCAAGCTTTGTTCCCC
ATGTGGAAAGGGCTCTCGAGTGGAAAGACTTTCTCAGCCTGTTTTATGTT
TCTGAGGAAGAAACTTCTGCTTTTTGGCCTCCTGTTTGCAAGGATGAAAT
GTTGGAGTACATGAGGAGTTCTGAAGTTCTCATCAAACGTTTAATGGATG
TGCTAGTAAAGGGGCTAAACGTGAAACGAATTGATGAAATAAGAGAACCT
ATGTTGTTGGGCTCAAGAAGAGTTAACCTCAACTATTATCCTATGTGTCC
CAATCCTGAACTCACAGTTGGCGTAGGCCGTCATTCAGATATTTCAACAT
TCACTATCCTCCTCCAAGATGACATCGGGGGACTTCACGTGCGAAAGGAC
AATGGTACTGACTGGATTCATGTCGCTCCAATTAGCGGATCACTCATTAT
CAACATTGGTGATGCATTGCAAATCATGAGCAATGGTCGATACAAAAGTA
TTGAGCATTGTGTGATTGCCAATGGAAGCCAGA
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